Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000835495.1_202015-02-
23] 277 sequences; 43,029,152 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq7 141 2e-28
seq6 129 1e-24
seq4 100 7e-16
>seq7
Length=4110827
Score = 141 bits (156), Expect = 2e-28
Identities = 144/188 (77%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||| || || || || || || ||||| || || |||||||| |||||||||
Sbjct 1063120 CAAATCTTCGTAAAGACACTTACTGGCAAGACGATTACGCTGGAGGTGGAGAGCTCAGAC 1063061
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| |||||||| ||||| |||||||| || || || ||||||||||||||
Sbjct 1063060 ACGATCGACAACGTCAAGTCGAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAGCAG 1063001
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || || ||||| || || ||| | || || || ||||||| ||| || ||| ||
Sbjct 1063000 CGGCTGATTTTCGCGGGCAAGCAGTTGGAGGACGGGCGGACTCTCAGCGACTACAACATC 1062941
Query 178104 CAAAAAGA 178111
|| || ||
Sbjct 1062940 CAGAAGGA 1062933
Score = 141 bits (156), Expect = 2e-28
Identities = 155/206 (75%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| |||||||| || || || || || || ||||| || ||||| || | |||
Sbjct 1063576 CAAATCTTCGTGAAGACACTTACTGGCAAGACCATCACGCTTGAGGTCGAGTCCAGCGAC 1063517
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| || |||||| ||||| |||||||| || || ||||| |||||||||||
Sbjct 1063516 ACGATCGACAATGTCAAATCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAGCAG 1063457
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||||||||| || || |||||||| || | || || |||| || ||| ||
Sbjct 1063456 CGCCTGATCTTCGCCGGCAAGCAACTCGAAGACGGCCGCACCCTGTCCGACTACAACATC 1063397
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || ||||| || ||
Sbjct 1063396 CAGAAGGAGTCGACCCTGCACCTGGT 1063371
>seq6
Length=4175021
Score = 129 bits (142), Expect = 1e-24
Identities = 136/179 (76%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATC 177989
||||| || || ||||| || || || |||||||| ||||| || || ||||| |||
Sbjct 1382970 TTCGTCAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTCGAGTCGTCCGACACGATC 1383029
Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049
|| |||||||| ||||| || ||||| ||||| ||||| || |||||||| ||| |
Sbjct 1383030 GACAACGTCAAGTCCAAGATCCAAGACAAGGAAGGCATCCCGCCCGACCAGCAGCGATTG 1383089
Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAA 178108
||||||||||| || || || |||||||| | ||||| ||| || ||| |||| ||
Sbjct 1383090 ATCTTCGCCGGCAAGCAACTTGAAGATGGCCGAACTCTGAGCGACTACAACATCCAGAA 1383148
>seq4
Length=6030834
Score = 100 bits (110), Expect = 7e-16
Identities = 94/120 (78%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 178014 GACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAA 178073
||||| ||||| || || |||||||||||||| || ||||||||||| || || ||||||
Sbjct 3720578 GACAAGGAAGGCATTCCCCCGGACCAGCAACGCCTGATCTTCGCCGGCAAGCAACTCGAA 3720637
Query 178074 GATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTG 178133
|| || | ||||| |||| || ||| |||| || ||||| || || || || || |||
Sbjct 3720638 GACGGCCGCACTCTCTCCGACTACAACATCCAGAAGGAATCGACCCTCCACCTGGTCTTG 3720697
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203726927882738
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |