Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000835495.1_202015-02-
23] 277 sequences; 43,029,152 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq7 174 1e-38
seq5 138 1e-27
seq4 129 5e-25
seq6 87.8 2e-12
>seq7
Length=4110827
Score = 174 bits (192), Expect = 1e-38
Identities = 178/230 (77%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
|||||| || ||||| | ||||| ||||| || ||||||||| ||||| ||||||||
Sbjct 1063352 GCCGCCACGGAGACGGAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGA 1063411
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
|||||||| |||| ||||| |||||||||||||| ||||||||||| ||||||| |||
Sbjct 1063412 CAGGGTGCGGCCGTCTTCGAGTTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGG 1063471
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813
| || |||||||||| || | || | || || | | | |||||||| ||||| |
Sbjct 1063472 GATGCCCTCCTTGTCC-TGGATCTTGGATTTGACATTGTCGATCGTGTCGCTGGACTCGA 1063530
Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
|||| | ||| || || || || || || ||||| ||||| || ||||||
Sbjct 1063531 CCTCAAGCGTGATGGTCTTGCCAGTAAGTGTCTTCACGAAGATTTGCATG 1063580
Score = 167 bits (184), Expect = 2e-36
Identities = 178/230 (77%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|||||||| || || | ||| ||||| ||||| |||||||| ||||| ||||| |||
Sbjct 1063125 CCGCCGCGGAGCCGGAGCACGAGATGGAGCGTCGATTCCTTCTGGATGTTGTAGTCCGAG 1063184
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC-CGCGGG 41754
|| ||||| |||| || ||||||||||| || || ||||||||||| ||||| |||||
Sbjct 1063185 AGCGTGCGGCCGTCCTCCAGCTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCGGGCGGG 1063244
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813
| | || ||||||||| ||| || ||| ||| | | | ||||||||||| || |
Sbjct 1063245 ATCCCT-TCCTTGTCCTGGATCTTGCTCTT-GACGTTGTCGATCGTGTCGCTCGATTCAA 1063302
Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
|||||| ||| ||||| || || || || ||||||||||| || ||||||
Sbjct 1063303 CCTCCAGCGTGATCGTCTTGCCAGTAAGTGTCTTTACGAAGATTTGCATG 1063352
Score = 156 bits (172), Expect = 4e-33
Identities = 176/232 (76%), Gaps = 8/232 (3%)
Strand=Plus/Plus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
|||||| || || | | ||||| |||| ||||||||||||||| ||||| ||||||
Sbjct 1062896 GCCGCCACGCAGTCTCAGCACCAAGTGCAACGTGCTCTCCTTCTGGATGTTGTAGTCGCT 1062955
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
||| || ||| |||| || | ||||||||| ||||| ||||| ||||| ||||||| ||
Sbjct 1062956 GAGAGTCCGCCCGTCCTCCAACTGCTTGCCCGCGAAAATCAGCCGCTGCTGGTCCGGAGG 1063015
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACT 41810
|| || |||||||||| ||| || ||| ||| | | | ||||| ||| ||
Sbjct 1063016 AATGCCCTCCTTGTCCTGGATCTTCGACTT-GACGTTGTCGATCGTGTCTGAGCT---CT 1063071
Query 41811 CCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||||||||| ||| ||||| || || || || ||||||||||| || |||||
Sbjct 1063072 CCACCTCCAGCGTAATCGTCTTGCCAGTAAGTGTCTTTACGAAGATTTGCAT 1063123
>seq5
Length=4609732
Score = 138 bits (152), Expect = 1e-27
Identities = 170/230 (74%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||||||||| || || ||| ||||| ||||| |||||||| ||||| ||||||||
Sbjct 1364975 GCCGCCGCGGAGGCGGGGCACGAGATGGAGCGTCGATTCCTTCTGGATGTTGTAGTCGGA 1365034
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCG-CGG 41753
|||||| |||| || ||||||||||| || || ||||||||||| ||||| | |
Sbjct 1365035 CCTGGTGCGGCCGTCCTCCAGCTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCGGATGT 1365094
Query 41754 GAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCA 41813
|| | || ||||||||| || || ||| | | |||||||||||||| |
Sbjct 1365095 GATCCCT-TCCTTGTCCTAAATCTTGCTCTTGATGTTGTTGATTGTGTCGCTCGACTCAA 1365153
Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
|||||| ||| ||||| || | || || ||||| | |||||||||||||
Sbjct 1365154 CCTCCAGCGTGATCGTCTTGACAGTAAGTGTCTTCATGAAAATCTGCATG 1365203
Score = 102 bits (112), Expect = 8e-17
Identities = 109/144 (76%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
|||||| || || | | ||| | ||||| || |||||||| ||||| ||||||||
Sbjct 1365203 GCCGCCACGCAGGTGGATGACCGGGTGCAGGGTCGAGTCCTTCTGGATGTTGTAGTCGGA 1365262
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
|||||| | || ||||| |||||||||||||| ||||||||||| || || | ||
Sbjct 1365263 CCTGGTGCGGCCATCATCGAGTTGCTTGCCGGCGAAGATCAGGCGCTGCTGTTCGGGCGG 1365322
Query 41755 AACGCTCTCCTTGTCCATGATTTT 41778
|| || |||||||||| ||| ||
Sbjct 1365323 AATGCCCTCCTTGTCCTGGATCTT 1365346
>seq4
Length=6030834
Score = 129 bits (142), Expect = 5e-25
Identities = 109/134 (81%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| ||||| ||||| || ||||| || || || |||||||| ||||| |||||||||
Sbjct 3720711 CCACCGCGAAGACGCAAGACCAGGTGGAGGGTCGATTCCTTCTGGATGTTGTAGTCGGAG 3720652
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| ||||| |||| ||||| |||||||||||||| |||||||| || ||||||| ||||
Sbjct 3720651 AGAGTGCGGCCGTCTTCGAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCCGGGGGA 3720592
Query 41756 ACGCTCTCCTTGTC 41769
| || ||||||||
Sbjct 3720591 ATGCCTTCCTTGTC 3720578
>seq6
Length=4175021
Score = 87.8 bits (96), Expect = 2e-12
Identities = 130/182 (71%), Gaps = 2/182 (1%)
Strand=Plus/Minus
Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732
||||||| ||||| |||||| || || || | || || || |||||||||||||| |
Sbjct 1383150 CCTTCTGGATGTTGTAGTCGCTCAGAGTTCGGCCATCTTCAAGTTGCTTGCCGGCGAAGA 1383091
Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACG 41792
||| ||||| ||||| | || | || |||||||| ||| || ||| ||| |
Sbjct 1383090 TCAATCGCTGCTGGTCGGGCGGGATGCCTTCCTTGTCTTGGATCTTGGACTT-GACGTTG 1383032
Query 41793 AC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACG 41851
| | |||||| |||||| ||||| | || || || || ||||| || ||||| |||
Sbjct 1383031 TCGATCGTGTCGGACGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACG 1382972
Query 41852 AA 41853
||
Sbjct 1382971 AA 1382970
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462302399272400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |