Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017
-02-15] 843 sequences; 47,573,060 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq553 136 8e-27
seq744 125 2e-23
seq657 123 5e-23
seq141 84.2 5e-11
>seq553
Length=41262
Score = 136 bits (150), Expect = 8e-27
Identities = 444/677 (66%), Gaps = 12/677 (2%)
Strand=Plus/Minus
Query 318997 TCTTCACCGGAGGCATAACGCCATTGGATATACTGGTTGGGTGTCATGTCAAGATGATCC 319056
|||||||| | | |||||||||||||| || | ||| || || |||| | |||
Sbjct 40698 TCTTCACCAGTGTGGTAACGCCATTGGATGTATTCGTTAGGGGTTTTGTCCAAGTGACGT 40639
Query 319057 TCGATGTGGTGGAAAGCATGCTGTGCCACGTAAGCAAGACGCATATTTGGATGCTTCCAA 319116
|||||||||||||||||||| || || || || |||| |||| || ||||| ||||
Sbjct 40638 TCGATGTGGTGGAAAGCATGTTGAGCGACATAGGCAATGCGCAAGTTAGGATGTCTCCAG 40579
Query 319117 ACACTACCGATGGTGGCTTCCATTTGTCCCGTGAGCACCTTAATGAGGGTGCTTTTCCCC 319176
||| |||| | || || |||| || || | || ||| || | ||| || ||
Sbjct 40578 ACAGTACCAACCTCGGACTCGATTTCACCAGTCAACAACTTGATCAAGGTAGACTTACCA 40519
Query 319177 GCACCGTTTTCGCCCACCACACCGATCCTGGAGTTCAGCGATACCTGGGCATTCACGTTG 319236
|||||||| || | || | | | |||| || || || | |||| | | ||
Sbjct 40518 GCACCGTTGGGACCAATGACGGCAACACGGGAGGCAAGAGA-ACAT-TGCATGGA-GATG 40462
Query 319237 TCAAAGATTAGTTT---TTCCGTACCCGGATACTTGAACCCCACACCGCGTAGCTTCATG 319293
|||| | | | || || | ||| ||||||| ||| | || | ||||| |
Sbjct 40461 TCAATCAGTTGCTTGCGGTCAGAACCAGGATACTGGAAGTCAACGTTCTTCATCTTCAAG 40402
Query 319294 ATGGCACGGTCCTTCGAAGTGATACCCTCGAGGAACCCGGGCTCGGGGAACTTCCACGTG 319353
|| ||||| ||||| | ||||||| || | ||| || ||||| ||||| || ||
Sbjct 40401 ATTGCACGTTCCTTAGTCTTGATACCTTCCAAGAAACCAGGCTCAGGGAAAGAGAACTTG 40342
Query 319354 GTCTTCGTCTCGGTAAGGGCGTAGTAACTCGCTG-ATTCGGGACGCTTCTTCACGAACTC 319412
| | || | | || ||||||| || | | ||||| |||||| ||||| ||
Sbjct 40341 ATTTGAGTAGCTTCCAAGGAGTAGTAAGAGGCAGCACGAGGGAC-CTTCTTTACGAATTC 40283
Query 319413 GGACAGATTTCCCTTGTACTTCTTCAGCTTTAGGTTAGGTTCGTAATGGATAATAGAGGT 319472
||||| || |||||||| ||| ||||| ||| |||||||| || || || ||
Sbjct 40282 GGACAAGTTACCCTTGTAGCGCTTGAGCTTATAGTTGGGTTCGTAGTGAATGATGTCGGA 40223
Query 319473 GCAAACAGCGTCGAGGAACCCGGAGTCGTGTGACACAATCACGCACGAAACGTCCTTAAG 319532
|| ||| || | ||| || |||||||| || ||||| | | | ||| ||| |
Sbjct 40222 ACAGACATGATCCAAGAAACCAGAGTCGTGGGAGACAATGATAGAGGTAACAGTCTTCAA 40163
Query 319533 GTTGATCAGGTATTCAATCAACCACCTCACGTTAGAC-ACAGAAAGATGGTTGGTCGGCT 319591
| ||||| | || ||| ||||| ||| ||| | || ||||| || |
Sbjct 40162 ACCAAGAAGGTAGTTCTCCAGCCAGGCAACGTT-GACAACATCCAAGTGATTGGTAGGTT 40104
Query 319592 CGT-CAAGAAGCAGTAGCTTTGCGTTCAGGAGCATTGCACGTGCAAGAGCGAGTTTCATT 319650
||| ||| ||| || | | || |||| | ||| ||||| |||||||| || |||||
Sbjct 40103 CGTCCAACAAG-AGGATATCAGCATTCATCAACATAGCACGGGCAAGAGCAAGCTTCATC 40045
Query 319651 TTCCACCCTCCGGAAAG 319667
||||| || || || ||
Sbjct 40044 TTCCAACCACCAGAGAG 40028
>seq744
Length=38458
Score = 125 bits (138), Expect = 2e-23
Identities = 144/194 (74%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 230446 CTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 230505
|| || |||||||| ||| | ||| | || |||||||||||||| || || || |
Sbjct 30720 CTCATCGGCATGAATTCTGCTTTGATGTGCCAATACATCGAATTCGTTGCTGATCGTCTC 30661
Query 230506 TTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAG 230565
| ||||| ||||| | || || | |||| ||| || || |||| ||||||||
Sbjct 30660 ATGGTTGCTCTTGGATTTGACAAGATTTACATGGCTACCAATCCATTTGACTTTATGGAC 30601
Query 230566 CTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGG 230625
| || || |||||||| |||||||||||||| |||||||||||| ||||||||| |
Sbjct 30600 ATGATCTCTCTTCAAGGCAAGACCAACTTCTTTGAAAAGCGTGTCTCTGACTATCAACGT 30541
Query 230626 CCTGGTGTGATGAA 230639
||||||| |||||
Sbjct 30540 GCTGGTGTCATGAA 30527
>seq657
Length=446211
Score = 123 bits (136), Expect = 5e-23
Identities = 140/188 (74%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 230450 TTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTG 230509
|||| |||||| | | || ||| | ||||||||||| ||||| ||||||||| | | |
Sbjct 211955 TTGGTATGAACTCCAAGCTCATGTGCCAGTACATCGAGTTCGTTGCCGACCGCCTGCTGG 211896
Query 230510 TTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCA 230569
| | ||||| || |||| |||||| | | |||||||| | || ||||| ||
Sbjct 211895 TCTCTCTTGGCAACAAGAAGTACTACAACGCCACAAACCCCTTCGACTTCATGGACAACA 211836
Query 230570 TTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTG 230629
| ||||| || ||||||||||||||||| ||||||||| ||||||| |||| | | |
Sbjct 211835 TCTCGCTCGCTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTACCAGAAGGCCG 211776
Query 230630 GTGTGATG 230637
|||| |||
Sbjct 211775 GTGTCATG 211768
>seq141
Length=39483
Score = 84.2 bits (92), Expect = 5e-11
Identities = 96/129 (74%), Gaps = 0/129 (0%)
Strand=Plus/Plus
Query 318996 GTCTTCACCGGAGGCATAACGCCATTGGATATACTGGTTGGGTGTCATGTCAAGATGATC 319055
||||||||| | ||||||||||| || || || | ||| || ||| | || | || |
Sbjct 18448 GTCTTCACCAGTAGCATAACGCCACTGAATGTATTCGTTTGGCGTCTTATCCAAGTGTTG 18507
Query 319056 CTCGATGTGGTGGAAAGCATGCTGTGCCACGTAAGCAAGACGCATATTTGGATGCTTCCA 319115
||||||||| ||||| || || || || || || |||| || | ||| |||||||||||
Sbjct 18508 CTCGATGTGATGGAAGGCGTGTTGAGCAACATAGGCAATGCGTAAATTAGGATGCTTCCA 18567
Query 319116 AACACTACC 319124
|| ||||
Sbjct 18568 TACCGTACC 18576
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057812574509090
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |