Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017 -02-15] 843 sequences; 47,573,060 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq744 140 3e-28 seq657 86.0 6e-12 >seq744 Length=38458 Score = 140 bits (154), Expect = 3e-28 Identities = 291/427 (68%), Gaps = 16/427 (4%) Strand=Plus/Plus Query 16688 ACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCCATGAAATCAAAA 16747 || || ||||| || ||||| || ||||| | ||||| || | ||||| || ||||| Sbjct 30557 ACACGCTTTTCAAAGAAGTTGGTCTTGCCTTGAAGAGAGATCATGTCCATAAAGTCAAAT 30616 Query 16748 GGATTAGTAGC--TGAAAATATTTTAGAGTACCCCAGTTCGGCGATTAATCTATCCGCTA 16805 ||||| ||||| || |||| || | | | || || | | || | | ||| || | Sbjct 30617 GGATTGGTAGCCATGTAAATCTTGTCAAAT--CCAAGAGCAACCATGAGACGATCAGCAA 30674 Query 16806 CAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGACGTACCGGAAGAG 16865 | ||||| || ||||||||||| || | | ||||| || || ||| || ||||||| Sbjct 30675 CGAATTCGATGTATTGGCACATCAAAGCAGAATTCATGCCGATGAGAGCAACGGGAAGAG 30734 Query 16866 CTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATA--CTAGCAACTCG 16923 | |||||||||||| || || || || |||||| || ||| || | || || Sbjct 30735 CATCCGTCAAAAATTCCTGTTCAATGCTGACAGCTTCCAAGATGATATCCTTG--ACGCG 30792 Query 16924 TTC----CTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAAATCGCAAT 16979 ||| || ||||| | || | |||||| |||| | ||||| || || || || Sbjct 30793 TTCTTGGCTAGGACGCT-TACG---AAGATGGGTAAATAAAAGACAAGCAAAGTCAGTAT 30848 Query 16980 GTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTC 17039 | | || || || | | ||| | ||| || |||||||| || |||||| || | Sbjct 30849 GAAGGCCTTCATCACGACAGATCAATTCATTGCTGAATGTCAAACCAGGCATCAAACCAC 30908 Query 17040 GTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATG 17099 ||||||| | |||||| || | || || || ||||| ||||| ||||| ||||| | | Sbjct 30909 GTTTCTTGAGCCAAAAAATGGAAGCAAAGGAACCAGAGAAGAAAATACCTTCGACAGCAG 30968 Query 17100 CAAACGC 17106 |||| || Sbjct 30969 CAAAGGC 30975 >seq657 Length=446211 Score = 86.0 bits (94), Expect = 6e-12 Identities = 115/160 (72%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293 || || || |||||||| ||| ||| | |||||||| ||||||||||| ||||| Sbjct 212401 ATGTAGGTGTCGATGAGAAGGGAGTATGTCTCGGAGTGGATGTTCTCCATCATGATCTGG 212460 Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGA 17353 || ||||| ||||| || || || | | || || || | ||| || || | || Sbjct 212461 AAACCGTAGAAGCAACGAGCCTCAGGGACCTGGACCTCGCCACTGAAACGCTCGACGAGG 212520 Query 17354 TTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCA 17393 || ||||| ||||||||||| ||||||||| || |||| Sbjct 212521 TTCTCGTTGACGATGCCGTCAGACGCGGCGAAGAAAGCCA 212560 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517540146363240