Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017
-02-15] 843 sequences; 47,573,060 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq744 140 3e-28
seq657 86.0 6e-12
>seq744
Length=38458
Score = 140 bits (154), Expect = 3e-28
Identities = 291/427 (68%), Gaps = 16/427 (4%)
Strand=Plus/Plus
Query 16688 ACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCCATGAAATCAAAA 16747
|| || ||||| || ||||| || ||||| | ||||| || | ||||| || |||||
Sbjct 30557 ACACGCTTTTCAAAGAAGTTGGTCTTGCCTTGAAGAGAGATCATGTCCATAAAGTCAAAT 30616
Query 16748 GGATTAGTAGC--TGAAAATATTTTAGAGTACCCCAGTTCGGCGATTAATCTATCCGCTA 16805
||||| ||||| || |||| || | | | || || | | || | | ||| || |
Sbjct 30617 GGATTGGTAGCCATGTAAATCTTGTCAAAT--CCAAGAGCAACCATGAGACGATCAGCAA 30674
Query 16806 CAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGACGTACCGGAAGAG 16865
| ||||| || ||||||||||| || | | ||||| || || ||| || |||||||
Sbjct 30675 CGAATTCGATGTATTGGCACATCAAAGCAGAATTCATGCCGATGAGAGCAACGGGAAGAG 30734
Query 16866 CTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATA--CTAGCAACTCG 16923
| |||||||||||| || || || || |||||| || ||| || | || ||
Sbjct 30735 CATCCGTCAAAAATTCCTGTTCAATGCTGACAGCTTCCAAGATGATATCCTTG--ACGCG 30792
Query 16924 TTC----CTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAAATCGCAAT 16979
||| || ||||| | || | |||||| |||| | ||||| || || || ||
Sbjct 30793 TTCTTGGCTAGGACGCT-TACG---AAGATGGGTAAATAAAAGACAAGCAAAGTCAGTAT 30848
Query 16980 GTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTC 17039
| | || || || | | ||| | ||| || |||||||| || |||||| || |
Sbjct 30849 GAAGGCCTTCATCACGACAGATCAATTCATTGCTGAATGTCAAACCAGGCATCAAACCAC 30908
Query 17040 GTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATG 17099
||||||| | |||||| || | || || || ||||| ||||| ||||| ||||| | |
Sbjct 30909 GTTTCTTGAGCCAAAAAATGGAAGCAAAGGAACCAGAGAAGAAAATACCTTCGACAGCAG 30968
Query 17100 CAAACGC 17106
|||| ||
Sbjct 30969 CAAAGGC 30975
>seq657
Length=446211
Score = 86.0 bits (94), Expect = 6e-12
Identities = 115/160 (72%), Gaps = 0/160 (0%)
Strand=Plus/Plus
Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293
|| || || |||||||| ||| ||| | |||||||| ||||||||||| |||||
Sbjct 212401 ATGTAGGTGTCGATGAGAAGGGAGTATGTCTCGGAGTGGATGTTCTCCATCATGATCTGG 212460
Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGA 17353
|| ||||| ||||| || || || | | || || || | ||| || || | ||
Sbjct 212461 AAACCGTAGAAGCAACGAGCCTCAGGGACCTGGACCTCGCCACTGAAACGCTCGACGAGG 212520
Query 17354 TTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCA 17393
|| ||||| ||||||||||| ||||||||| || ||||
Sbjct 212521 TTCTCGTTGACGATGCCGTCAGACGCGGCGAAGAAAGCCA 212560
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517540146363240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |