Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017
-02-15] 843 sequences; 47,573,060 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq744 235 7e-57
seq578 136 5e-27
seq723 102 1e-16
seq657 98.7 1e-15
>seq744
Length=38458
Score = 235 bits (260), Expect = 7e-57
Identities = 564/846 (67%), Gaps = 9/846 (1%)
Strand=Plus/Plus
Query 23846 TTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTTTC 23905
||| || ||| ||||| ||||| || || || || || |||| | || || | ||
Sbjct 30544 TTGATAGTCAGAGACACGCTTTTCAAAGAAGTTGGTCTTGCCTTGAAGAGAGATCATGTC 30603
Query 23906 CATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAATCCCAATTCAGAAATCAA 23965
||| || || ||||||||||| | | || || | | |||||| | || || |
Sbjct 30604 CATAAAGTCAAATGGATTGGTAGCCATGTAAATCTTGTCAAATCCAAGAGCAACCATGAG 30663
Query 23966 TCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTT 24025
| ||| || || || || || ||| ||||| || ||||||| || || ||
Sbjct 30664 ACGATCAGCAACGAATTCGATGTATTGGCACATCAAAGCAGAATTCATGCCGATGAGAGC 30723
Query 24026 AACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAGA 24085
||| |||||||| | || | |||||| |||||||| ||| || || || |||
Sbjct 30724 AACGGGAAGAGCATCCGTCAAAAATTCCTGTTCAATGCTGACAGCTTCCAAGATGATATC 30783
Query 24086 TCTTACTGTTTCTTCACTCGGTGGAT-ACAATAAATGTTTAAACATCAAACATGCGAAAT 24144
| || ||||| || || | | || | | ||| |||| | | ||| || || |
Sbjct 30784 CTTGACGCGTTCTTGGCTAGGACGCTTACGA-AGATGGGTAAATAAAAGACAAGCAAAGT 30842
Query 24145 CGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTA 24204
| || || || || || | || || ||||| ||| || || | || ||||| |
Sbjct 30843 CAGTATGAAGGCCTTCATCACGACAGATCAATTCATTGCTGAATGTCAAACCAGGCATCA 30902
Query 24205 GGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTA 24264
||||| || || |||||||| ||||| ||||| || ||||| |||||||| ||||| |
Sbjct 30903 AACCACGTTTCTTGAGCCAAAAAATGGAAGCAAAGGAACCAGAGAAGAAAATACCTTCGA 30962
Query 24265 CTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGGCGCTGTCATGTATCCACTTTTGAG 24324
| || |||||||||| ||| | || || || || | |||||||| |
Sbjct 30963 CAGCAGCAAAGGCAACAAGACGCTCAGCAAAAGAACCGTTAGAGGAAATCCACTTGAAGG 31022
Query 24325 CCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGtttt 24384
||||||| ||||| |||| | |||||| || || || |||||| |||||| | ||
Sbjct 31023 CCCAATCAGCCTTTCTTTTGATACAAGGGATAGTGTCAATAGCAGAAAAGAGCATTTCTT 31082
Query 24385 tttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGT 24444
| || | ||||||| | ||| || |||||||||||||| || |||| | ||||| |
Sbjct 31083 TCTCTTGGTTATCTTTGATATAAGTGTCAATCAAAAGACTGTAAGTTTCTGCGTGAATAT 31142
Query 24445 TTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTATAC 24504
||||||| |||||||| || ||||||||| |||| || | ||||| ||||| ||
Sbjct 31143 TTTCAATCATGATTTGAAAGCCATAGAAACATTTAGCTTCAGGAATCTTGACTTCATCAC 31202
Query 24505 AAAATCGTTCTG--CTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAA 24562
|||| ||| || | || |||||||| || || || || | ||||| || || ||
Sbjct 31203 AAAA--GTTTTGAACCAAGTTTTCATTAACAATGCCATCTGAACCAGCAAAGAAGGCTAA 31260
Query 24563 TACATGTTTTATAAAATATTTTTCGTCT--GGTGTTAGT-TTATTCCAATCATTGATATC 24619
|| | ||||| | ||||| | ||| | | || | |||||||| | ||
Sbjct 31261 GACGCGAGAGATAAAGAAGCGTTCGTTTTCGGTCATCTTGTTTTCCCAATCATGAAGGTC 31320
Query 24620 TTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATT 24679
|| | ||| | |||||| |||||||||| || || || || || ||||| | |
Sbjct 31321 CTTGCTCAAATCGATTTCTTCAGCTGTCCAAAAGGAAGCTTCAGCTTTCTTATAGAATTG 31380
Query 24680 CCAGAT 24685
||||||
Sbjct 31381 CCAGAT 31386
>seq578
Length=440600
Score = 136 bits (150), Expect = 5e-27
Identities = 436/667 (65%), Gaps = 12/667 (2%)
Strand=Plus/Minus
Query 54010 CCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-A 54068
||| || |||| | || || || ||||| |||||||| ||| |||| || || ||| |
Sbjct 115942 CCAGTCACCGTTAGACTCAACACGCTTCATGAAGAGATCGGGAGTCCAGAGGGC-ATAGA 115884
Query 54069 ATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCA 54128
| || || | | ||| || || || || ||||| ||| || | |||| | |
Sbjct 115883 AGAGGTCACGTGCTCTGACCTCTTCCTTACCGTGGTTCTTGCGAAGGTCCAAGAACTCAA 115824
Query 54129 TAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTC 54188
|| || || ||||| || |||| ||| || | | | | ||||| || ||||| || |
Sbjct 115823 AGATGTCGGAGTGCCAGGGCTCCAGGTAGATAGCGAAAGCACCAGGGCGCTTGTTCCCGC 115764
Query 54189 CCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGG 54248
|||| || | |||||| || ||||| || | |||| | ||| || | || || ||||
Sbjct 115763 CCTGGTCAACGTATCTTGCAGTGTTGTTGAACACTCGAAGCATAGGGACAAGCCCGTTGG 115704
Query 54249 ATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAA--TTGATAG 54306
| | || || || || ||| || || | ||||| ||| | |||| |
Sbjct 115703 AAGTTCCGTTAGTACCACCGATGTAAGAACCTGTAGCACGGATACGGTGGACGTTGA--G 115646
Query 54307 ACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCC 54366
||| || || || || | || ||||| | || || || || || |||||||| ||
Sbjct 115645 ACCAATACCACCCGCAGTCTTGGAGATCATGGCACAAGTCTTCAAGGTGTCATAGATACC 115586
Query 54367 CTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGT 54426
||| || || || ||| |||| | | || || ||| | || || | || |||
Sbjct 115585 CTCAATGCTGTCCTCCTTCATATCGATAAGGAAGCAGGAGGCCAGCTGCGGCTGAGGAGT 115526
Query 54427 TCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTA 54486
|| || || || | || || || ||||| || || |||| | || | ||||||||
Sbjct 115525 ACCGGCGTTGAACAGAGTCGGCGAGGCGTGAGTGAAGTATTTCTGGGACATCAGATTGTA 115466
Query 54487 CGTCTCGATAGCTGAGTCTATATCC-CATTGATGAATTCCTACTGCGACACGCATTAACA 54545
||||||||| | || | || || | || ||||| || || |||||||| | ||
Sbjct 115465 GGTCTCGATAACCTTCTCGAGGTCATCACCG-TGGATTCCGACCGCAACACGCATAATCA 115407
Query 54546 TGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAG 54605
|||||||||| | ||| | | ||| || || |||| || ||| ||||| ||
Sbjct 115406 TGTGCTGAGGACGCTCAGCAACCTTTCCATTGATGCGGAGCAGATACGATCGTTCCAGAG 115347
Query 54606 TTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACTGAGTTGAG 54663
| || || || || || | ||| ||||| || || || |||| |||| | ||||| |
Sbjct 115346 TCTTGAATCCGAAGTATTGGTAGTTGAAA--TCACGGTCATAAACAATAGCGGAGTTCAA 115289
Query 54664 TTTATCC 54670
|| ||||
Sbjct 115288 TTCATCC 115282
>seq723
Length=18298
Score = 102 bits (112), Expect = 1e-16
Identities = 275/420 (65%), Gaps = 3/420 (1%)
Strand=Plus/Plus
Query 52846 ATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTT 52905
||||||||| || || |||| || |||| | ||||| |||||| || | |||
Sbjct 4430 ATAGTACATGCCAGTCTTTAATCCCTTCTTCCAGGCATAAAAGTGCATAGAGGTCAATTT 4489
Query 52906 GGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCC 52965
| | | | || || || || | ||||||||||||| ||| ||||| || |||||
Sbjct 4490 GCCAAAGTTTGGTTCGGCAGTAAACAAATTCATAGATTGAGATTGGTCGATAAAAGCTCC 4549
Query 52966 CCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAAC 53025
|| || || ||||| | || || || |||||| ||| ||||| | ||||| || |
Sbjct 4550 TCTATCAGCGGCCATGTCAATAATAGTTCTTTGTGAAATCTCCCATACTGTTTTGTATAG 4609
Query 53026 TCGCTTAATATCTTCTGGAAGGTTTG---TATTCTGAATAGATCCACCATCTACCATAAT 53082
|| | ||| || |||| | | || || ||| || |||| | || ||
Sbjct 4610 CTTTTTGAGATCATCAGGAACGCCGGGAATACGTTGGATACTACCGCCATGAGCAATCAT 4669
Query 53083 CCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGG 53142
| | |||||||| | |||||||||||| | ||| | | | | | | |||| |
Sbjct 4670 CATGTTCTTGATGTTATCATTCCATAAATCGAGCTCAATGAGGTCATTCAATAAATGCTG 4729
Query 53143 ATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGG 53202
|| |||| ||| ||||| ||| || | || || |||||||| || || || ||
Sbjct 4730 GTTGACTATTTGGAATTCACCACTTTGAACACGACGCGTATAAATATTGCTAGTGTAAGG 4789
Query 53203 TTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCAC 53262
|| | | || ||||| ||||| |||||| ||| ||||| |||||||| || ||
Sbjct 4790 CTCGAAGCATTCGTTATTGCCCAATATTTGACTAGTGCTAGCAGTAGGCATAGGAGCAAC 4849
>seq657
Length=446211
Score = 98.7 bits (108), Expect = 1e-15
Identities = 114/154 (74%), Gaps = 0/154 (0%)
Strand=Plus/Plus
Query 24126 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 24185
|||| || ||| ||||| ||| ||| |||||||| || | | || | ||||| ||
Sbjct 212063 AACAGCAGACAAGCGAAGTCGGTGTGCAGACCCTCATCACGAGAGATCAGCTCGTTAGAG 212122
Query 24186 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 24245
|| || || || ||||| ||||||||||| || ||||| || || || || || || |||
Sbjct 212123 AAGGTCAGACCAGGCATGAGGCCACGCTTCTTCAGCCAGAAGATAGAGGCGAAAGAGCCA 212182
Query 24246 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAA 24279
|| ||||| || || || || || || |||||||
Sbjct 212183 GAGAAGAAGATACCCTCAACAGCAGCGAAGGCAA 212216
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593715343658640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |