Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017
-02-15] 843 sequences; 47,573,060 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq657 197 1e-45
seq812 131 2e-25
seq810 123 3e-23
seq799 104 2e-17
seq744 98.7 1e-15
>seq657
Length=446211
Score = 197 bits (218), Expect = 1e-45
Identities = 215/285 (75%), Gaps = 3/285 (1%)
Strand=Plus/Minus
Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695
|| |||| |||||||| ||||| ||||| || |||||||| | |||||| | || |||
Sbjct 212687 ATCTGGCAGATGTACAAGAAGGCAGAGGCTTCCTTCTGGACTGCTGAGGAGATCGATCTG 212628
Query 116696 TCCAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752
||||||||| | ||||||| | ||| | ||| | |||||||| | ||||||
Sbjct 212627 TCCAAGGACCTGCACGACTGGAACAACCGCCTCAACAATGACGAGCGCTACTTCATCTCC 212568
Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812
|| || ||||| || |||||||| |||||||||||||||||||| || |||||||||
Sbjct 212567 CATGTCCTGGCTTTCTTCGCCGCGTCTGACGGCATCGTCAACGAGAACCTCGTCGAGCGT 212508
Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872
||| | ||||| ||||| | ||||| || ||||||||||| || |||||| |||
Sbjct 212507 TTCAGTGGCGAGGTCCAGGTCCCTGAGGCTCGTTGCTTCTACGGTTTCCAGATCATGATG 212448
Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTAC 116917
|||||| | ||||| || | || || ||||||||||| |||
Sbjct 212447 GAGAACATCCACTCCGAGACATACTCCCTTCTCATCGACACCTAC 212403
Score = 196 bits (216), Expect = 5e-45
Identities = 312/448 (70%), Gaps = 0/448 (0%)
Strand=Plus/Minus
Query 116982 AGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCC 117041
|||||||||| ||||| | ||||||||| | || ||| || | |||| | |||||
Sbjct 212279 AGAAGGCCGACTGGGCCATTCGCTGGATCCAGGACAAGGAGTCCACTTTCGCCCAGCGCT 212220
Query 117042 TGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTT 117101
|||| |||||||| || || ||||| ||||||| || ||| ||||||| | || || |
Sbjct 212219 TGGTTGCCTTCGCTGCTGTTGAGGGTATCTTCTTCTCTGGCTCTTTCGCCTCTATCTTCT 212160
Query 117102 GGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGG 117161
|||| ||||| || ||||||||||| || ||||| ||| |||||||| ||||| | |
Sbjct 212159 GGCTGAAGAAGCGTGGCCTCATGCCTGGTCTGACCTTCTCTAACGAGCTGATCTCTCGTG 212100
Query 117162 ACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGA 117221
| ||||||||||| |||||| || ||| |||||||| || || | || ||
Sbjct 212099 ATGAGGGTCTGCACACCGACTTCGCTTGTCTGCTGTTCTCCCACCTGAACAACCGCCCCT 212040
Query 117222 GCGCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCA 117281
| | | ||| | ||||| || || || |||| ||| |||||| ||||| |
Sbjct 212039 CACCTGAGGTTGTCGAGAAGATCATCGTTGATGCCGTCGACATTGAGCAGGAGTTCCTGA 211980
Query 117282 CCGAAGCGCTGCCGGTGCGTCTGCTGGGACTCAATTGCGAAACGATGTCGCAATACATCG 117341
| || || || || || || || || | || | | | |||| || |||||||
Sbjct 211979 CGGACGCCCTCCCCGTTGCCCTCCTTGGTATGAACTCCAAGCTCATGTGCCAGTACATCG 211920
Query 117342 AGTTCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCCA 117401
||||||| |||||| | |||||| || || | | | ||| |||||||| | | |
Sbjct 211919 AGTTCGTTGCCGACCGCCTGCTGGTCTCTCTTGGCAACAAGAAGTACTACAACGCCACAA 211860
Query 117402 ACCCGCTGGACTTTATGAACCTCATCTC 117429
|||| | ||||| ||| || ||||||
Sbjct 211859 ACCCCTTCGACTTCATGGACAACATCTC 211832
>seq812
Length=913560
Score = 131 bits (144), Expect = 2e-25
Identities = 144/189 (76%), Gaps = 2/189 (1%)
Strand=Plus/Minus
Query 40712 TCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAAG 40770
|||| || || ||||||||| |||| ||||| || | |||| | | | |||| |||||
Sbjct 529413 TCACTGGAAAGACCATCACCCTCGAGGTCGAGTCCTCGGACACCATCGACAACG-TCAAG 529355
Query 40771 GAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGC 40830
|| || | ||||| ||||| ||||| | |||||||| || ||||||| ||| ||
Sbjct 529354 AGCAAGATCCAGGACAAGGAGGGTATCCCTCCTGACCAGCAGCGTCTCATCTTCGCTGGA 529295
Query 40831 AAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTG 40890
|| ||||| || |||| ||||| ||| ||||||||||||||||||||| |||| |||
Sbjct 529294 AAGCAGCTTGAGGACGGTCGCACGCTCTCTGACTACAACATCCAGAAGGAGTCCACCCTG 529235
Query 40891 CATCTAGTG 40899
|| || |||
Sbjct 529234 CACCTGGTG 529226
Score = 123 bits (136), Expect = 3e-23
Identities = 159/217 (73%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || || || || || || |||||| |||| || || | ||
Sbjct 529207 ATGCAGATCTTCGTGAAGACCCTTACTGGAAAGACTATCACCCTCGAGGTTGAGTCTTCC 529148
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | | |||| ||||| || || | || || ||||| ||||| | |||||
Sbjct 529147 GACACCATCGACAACG-TCAAGAGCAAGATCCAGGATAAGGAGGGTATCCCTCCCGACCA 529089
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
|||||| || |||| ||| || || ||||| || || | ||||| ||| |||||||||
Sbjct 529088 GCAACGTCTGATCTTCGCTGGAAAGCAGCTTGAGGATGGCCGCACACTCTCCGACTACAA 529029
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGC 40905
||||||||||||| | || || || || || |||||
Sbjct 529028 CATCCAGAAGGAGTCGACCCTTCACCTCGTCCTGCGC 528992
Score = 104 bits (114), Expect = 2e-17
Identities = 154/216 (71%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || || || || | || ||||| || ||||| | || || ||| ||| |
Sbjct 528751 ATGCAGATTTTTGTTAAGACTTTGACTGGCAAGACTATCACATTGGAGGTTGAATCCAGC 528692
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | |||| | ||| || |||| ||||| || || ||||| | |||||
Sbjct 528691 GACACAATTGACAACG-TGAAGAGCAAGATTCAAGACAAGGAAGGTATCCCTCCTGACCA 528633
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| || || |||| || || || |||||||| |||| || ||| | |||||||||
Sbjct 528632 GCAGCGCCTGATCTTTGCTGGTAAGCAGCTGGAGGACGGTCGTACCTTGTCCGACTACAA 528573
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904
|||||||||||| | || ||||| || || ||||
Sbjct 528572 CATCCAGAAGGAATCTACCCTGCACCTGGTTCTGCG 528537
>seq810
Length=1034423
Score = 123 bits (136), Expect = 3e-23
Identities = 138/182 (76%), Gaps = 2/182 (1%)
Strand=Plus/Plus
Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758
||||| || || || ||||| || ||||| ||| |||| ||||| | |||||| |
Sbjct 582831 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGATGTCGAGTCGTCCGACACGATC 582890
Query 40759 CA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACT 40817
| |||| |||||| || || | ||||| |||||||| ||| |||||||||| || ||
Sbjct 582891 GACAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGTCT 582949
Query 40818 CATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAA 40877
|||| ||| || || ||||| || || | ||||| || | ||||||||||||||||||
Sbjct 582950 GATCTTCGCCGGAAAGCAGCTCGAAGATGGCCGCACTCTGAGCGACTACAACATCCAGAA 583009
Query 40878 GG 40879
||
Sbjct 583010 GG 583011
>seq799
Length=343686
Score = 104 bits (114), Expect = 2e-17
Identities = 105/137 (77%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842
||||| ||||| |||||| | |||||||| || || |||| ||| || || ||||| ||
Sbjct 28898 GACAAGGAGGGTATCCCCCCTGACCAGCAGCGTCTGATCTTCGCTGGTAAGCAGCTCGAG 28839
Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902
|||| ||||| ||| ||||||||||||||||||||| | || || || || ||| |
Sbjct 28838 GACGGTCGCACTCTCTCGGACTACAACATCCAGAAGGAGTCGACCCTTCACCTCGTGCTC 28779
Query 40903 CGCTTGAGGGGCGGCGG 40919
||| || | || || ||
Sbjct 28778 CGCCTGCGTGGTGGTGG 28762
>seq744
Length=38458
Score = 98.7 bits (108), Expect = 1e-15
Identities = 216/321 (67%), Gaps = 2/321 (1%)
Strand=Plus/Minus
Query 117035 GAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCC 117094
||||| || || ||||| || || ||||| || | ||||| || || || || ||
Sbjct 30987 GAGCGTCTTGTTGCCTTTGCTGCTGTCGAAGGTATTTTCTTCTCTGGTTCCTTTGCTTCC 30928
Query 117095 ATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATC 117154
|| ||||||||||||||||| || | ||||| || |||| |||||||| || | |||
Sbjct 30927 ATTTTTTGGCTCAAGAAACGTGGTTTGATGCCTGGTTTGACATTCAGCAATGAATTGATC 30868
Query 117155 TCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCAT-TTGGTGCA 117213
| | || || || || ||| |||||||| ||| | | || | ||| || || |
Sbjct 30867 TGTCGTGATGAAGGCCTTCATACTGACTTTGCTTGTCTTTTATTTACCCATCTTCGT-AA 30809
Query 117214 GCGACCGAGCGCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCG 117273
||| || ||| | ||||||| ||| ||| || || || ||| ||| || |||
Sbjct 30808 GCGTCCTAGCCAAGAACGCGTCAAGGATATCATCTTGGAAGCTGTCAGCATTGAACAGGA 30749
Query 117274 CTTCCTCACCGAAGCGCTGCCGGTGCGTCTGCTGGGACTCAATTGCGAAACGATGTCGCA 117333
|| | || || || || || || ||| | || | |||| | ||||| ||
Sbjct 30748 ATTTTTGACGGATGCTCTTCCCGTTGCTCTCATCGGCATGAATTCTGCTTTGATGTGCCA 30689
Query 117334 ATACATCGAGTTCGTCGCCGA 117354
||||||||| ||||| || ||
Sbjct 30688 ATACATCGAATTCGTTGCTGA 30668
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515213770877680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |