Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017
-02-15] 843 sequences; 47,573,060 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq812 120 3e-22
seq810 107 2e-18
seq609 104 2e-17
seq799 89.7 4e-13
seq817 82.4 7e-11
>seq812
Length=913560
Score = 120 bits (132), Expect = 3e-22
Identities = 149/204 (73%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594
||||| |||||||| || ||||||||||||||| || ||||| ||| || | |||
Sbjct 528776 GTGGAGAGTAGACTCCTTCTGAATGTTGTAATCGGACAAGGTGCGGCCATCTTCCAACTG 528835
Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654
|| ||||| |||| ||||||||||| |||||||| ||||| || || ||| || ||
Sbjct 528836 CTTACCAGCAAAGATAAGACGCTGCTGGTCGGGAGGGATGCCTTCTTTATCTTGGATCTT 528895
Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714
|| || | |||| ||| || | ||||| || | || | || ||||||||
Sbjct 528896 GCTCTTGACGTTATCGATGGTATCTGACGATTCGACTTCCAGAGTAATAGTCTTGCCGGT 528955
Query 118715 CAGAGTTTTTACAAAAATCTGCAT 118738
|||||| || || |||||||||||
Sbjct 528956 CAGAGTCTTGACGAAAATCTGCAT 528979
Score = 113 bits (124), Expect = 4e-20
Identities = 139/190 (73%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
||||||| || | | | ||||| ||| | || ||||| || || |||||||| ||
Sbjct 529207 TACCTCCACGAAGACGGAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAG 529266
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
| ||||| ||||| ||||| ||||||||| |||||||||||||||| || ||||
Sbjct 529267 AGAGCGTGCGACCGTCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCAGGAG 529326
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| || ||||||||||| || || || || | |||| |||||||| | |||||
Sbjct 529327 GGATACCCTCCTTGTCCTGGATCTTGCTCTTGACGTTGTCGATGGTGTCCGAGGACTCGA 529386
Query 118690 CCTCGACGGT 118699
|||||| |||
Sbjct 529387 CCTCGAGGGT 529396
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571
|| || || | || || |||| ||| | ||||| || || || |||||||| ||| |
Sbjct 528525 CCACCACGGAGTCGCAGAACCAGGTGCAGGGTAGATTCCTTCTGGATGTTGTAGTCGGAC 528584
Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631
| || || ||||| ||||| || ||||| |||| || |||||||| || |||||
Sbjct 528585 AAGGTACGACCGTCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCAGGAGGG 528644
Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691
|| || ||||||||| ||| || || || | || | ||||| || || |||
Sbjct 528645 ATACCTTCCTTGTCTTGAATCTTGCTCTTCACGTTGTCAATTGTGTCGCTGGATTCAACC 528704
Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| | || | || ||||| |||| ||| || ||||||||||||||
Sbjct 528705 TCCAATGTGATAGTCTTGCCAGTCAAAGTCTTAACAAAAATCTGCAT 528751
>seq810
Length=1034423
Score = 107 bits (118), Expect = 2e-18
Identities = 131/179 (73%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 118551 TTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATG 118610
|| || |||||||| ||||||| |||||| ||| |||||||| ||||| ||| ||||
Sbjct 583009 TTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCTTCGAGCTGCTTTCCGGCGAAGATC 582950
Query 118611 AGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCG 118670
||||||||||| || || || |||||||||||||| || || || || | |||
Sbjct 582949 AGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCG 582890
Query 118671 ACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 118729
| ||||| | |||||| |||| ||| | || || || ||||| || || || ||
Sbjct 582889 ATCGTGTCGGACGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 582831
>seq609
Length=32548
Score = 104 bits (114), Expect = 2e-17
Identities = 116/155 (75%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||||||| | ||||| || ||||||||||||||||| |||| || || || |||
Sbjct 21001 ACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCACTCAAGGTACGACCGTCTTCG 20942
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
|| ||||| || ||| | |||||||| || ||||| ||||| || || ||||| |||
Sbjct 20941 AGTTGTTTACCGGCGAAAATGAGACGTTGTTGATCAGGAGGGATACCTTCCTTATCTTGG 20882
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCT 118684
|| ||||| || || | || | |||||| | |||
Sbjct 20881 ATCTTTTGCTTGACATTGTCAATGGTGTCAGAGCT 20847
>seq799
Length=343686
Score = 89.7 bits (98), Expect = 4e-13
Identities = 93/122 (76%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||| | ||| | || ||||| || || |||||||| || | |||||| |||||
Sbjct 28782 CACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGAGTGCGACCGTCCTC 28841
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
|||||| || |||||| |||| ||||||||||| || || || || |||||||||||||
Sbjct 28842 GAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCAGGGGGGATACCCTCCTTGTCTGG 28901
Query 118649 AA 118650
||
Sbjct 28902 AA 28903
>seq817
Length=563816
Score = 82.4 bits (90), Expect = 7e-11
Identities = 93/125 (74%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 47176 ATGTTACCCAGATCGCCTACGTGACGCTCGGCGGCGTTGGGAGCGCCGTGATTGCGGCCC 47235
||||| ||||| || || |||||||| | || || |||||||||||||| | |||
Sbjct 282070 ATGTTGCCCAGGTCACCAACGTGACGGACCTCGTCGGTGGGAGCGCCGTGAGTCTTGCCG 282129
Query 47236 AACGGATTATAGTGTTCGCCGGCCGACGTGCAGCCGTTGCTCGTGTCGCCGAATTCGTGC 47295
|| || || ||||| ||||| || |||||||||||| | |||| ||||| | |||
Sbjct 282130 AAGGGGTTGTAGTGAGGACCGGCGGAGGTGCAGCCGTTGGTGTTGTCACCGAACTGGTGG 282189
Query 47296 ACGTG 47300
| |||
Sbjct 282190 ATGTG 282194
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433825942799356
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |