Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017
-02-15] 843 sequences; 47,573,060 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq810 102 9e-17
seq812 95.1 1e-14
seq98 89.7 6e-13
>seq810
Length=1034423
Score = 102 bits (112), Expect = 9e-17
Identities = 134/183 (73%), Gaps = 2/183 (1%)
Strand=Plus/Minus
Query 42994 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 43053
|||| || || ||||| || |||||| || | || || |||||||| || ||||| |
Sbjct 583011 CCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCTTCGAGCTGCTTTCCGGCGAAGA 582952
Query 43054 TGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 43113
| || ||||||||||| | || | || |||||||||| ||| || |||| ||| |
Sbjct 582951 TCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGTTG 582893
Query 43114 -CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172
| | ||||||| ||| || ||||||| || ||||| || ||||| || ||||| ||
Sbjct 582892 TCGATCGTGTCGGACGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 582833
Query 43173 AAG 43175
|||
Sbjct 582832 AAG 582830
>seq812
Length=913560
Score = 95.1 bits (104), Expect = 1e-14
Identities = 145/204 (71%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016
||||| | | ||| | ||||| |||| ||| |||||| || || ||||| ||||
Sbjct 529209 CCTCCACGAAGACGGAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 529268
Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076
|| || || |||| || |||||||| |||||||| ||||| ||||||||||| | ||
Sbjct 529269 AGCGTGCGACCGTCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCAGGAGGG 529328
Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCAC 43135
| | |||||||||| ||| || |||| ||| | | | ||||| || || ||
Sbjct 529329 ATACCCTCCTTGTCCTGGATCTTGCTCTTGA-CGTTGTCGATGGTGTCCGAGGACTCGAC 529387
Query 43136 ATCGACCGTGATGGTTTTGCCCGT 43159
|||| |||||||| || || ||
Sbjct 529388 CTCGAGGGTGATGGTCTTTCCAGT 529411
Score = 91.5 bits (100), Expect = 2e-13
Identities = 137/192 (71%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052
||||| || || ||||| || | || || || |||| || |||||||||||||| ||
Sbjct 528561 TCCTTCTGGATGTTGTAGTCGGACAAGGTACGACCGTCCTCCAGCTGCTTACCAGCAAAG 528620
Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112
|| || ||||||||||| | || | | ||||||| | ||| | || | | |||
Sbjct 528621 ATCAGGCGCTGCTGGTCAGGAGGGATACCTTCCTTGT-CTTGAATCTTGCTCTTCACGTT 528679
Query 43113 G-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171
| | | |||||||| ||||| || || | ||||| || ||||| || | ||||| ||
Sbjct 528680 GTCAATTGTGTCGCTGGATTCAACCTCCAATGTGATAGTCTTGCCAGTCAAAGTCTTAAC 528739
Query 43172 AAAGATTTGCAT 43183
||| || |||||
Sbjct 528740 AAAAATCTGCAT 528751
>seq98
Length=24577
Score = 89.7 bits (98), Expect = 6e-13
Identities = 64/74 (86%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124
|||| | ||| |||||| |||||| ||||| |||||||||||||||| ||||| ||||||
Sbjct 1889 TCTCTTTGGCGGGGAATTGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTAACCACT 1948
Query 60125 ATACTACCGAGGAT 60138
|||||||| | |||
Sbjct 1949 ATACTACCAAAGAT 1962
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571811574472040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |