Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017 -02-15] 843 sequences; 47,573,060 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq810 102 9e-17 seq812 95.1 1e-14 seq98 89.7 6e-13 >seq810 Length=1034423 Score = 102 bits (112), Expect = 9e-17 Identities = 134/183 (73%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 42994 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 43053 |||| || || ||||| || |||||| || | || || |||||||| || ||||| | Sbjct 583011 CCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCTTCGAGCTGCTTTCCGGCGAAGA 582952 Query 43054 TGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 43113 | || ||||||||||| | || | || |||||||||| ||| || |||| ||| | Sbjct 582951 TCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGTTG 582893 Query 43114 -CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172 | | ||||||| ||| || ||||||| || ||||| || ||||| || ||||| || Sbjct 582892 TCGATCGTGTCGGACGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 582833 Query 43173 AAG 43175 ||| Sbjct 582832 AAG 582830 >seq812 Length=913560 Score = 95.1 bits (104), Expect = 1e-14 Identities = 145/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 ||||| | | ||| | ||||| |||| ||| |||||| || || ||||| |||| Sbjct 529209 CCTCCACGAAGACGGAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 529268 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 || || || |||| || |||||||| |||||||| ||||| ||||||||||| | || Sbjct 529269 AGCGTGCGACCGTCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCAGGAGGG 529328 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCAC 43135 | | |||||||||| ||| || |||| ||| | | | ||||| || || || Sbjct 529329 ATACCCTCCTTGTCCTGGATCTTGCTCTTGA-CGTTGTCGATGGTGTCCGAGGACTCGAC 529387 Query 43136 ATCGACCGTGATGGTTTTGCCCGT 43159 |||| |||||||| || || || Sbjct 529388 CTCGAGGGTGATGGTCTTTCCAGT 529411 Score = 91.5 bits (100), Expect = 2e-13 Identities = 137/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| || || ||||| || | || || || |||| || |||||||||||||| || Sbjct 528561 TCCTTCTGGATGTTGTAGTCGGACAAGGTACGACCGTCCTCCAGCTGCTTACCAGCAAAG 528620 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 || || ||||||||||| | || | | ||||||| | ||| | || | | ||| Sbjct 528621 ATCAGGCGCTGCTGGTCAGGAGGGATACCTTCCTTGT-CTTGAATCTTGCTCTTCACGTT 528679 Query 43113 G-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | |||||||| ||||| || || | ||||| || ||||| || | ||||| || Sbjct 528680 GTCAATTGTGTCGCTGGATTCAACCTCCAATGTGATAGTCTTGCCAGTCAAAGTCTTAAC 528739 Query 43172 AAAGATTTGCAT 43183 ||| || ||||| Sbjct 528740 AAAAATCTGCAT 528751 >seq98 Length=24577 Score = 89.7 bits (98), Expect = 6e-13 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 |||| | ||| |||||| |||||| ||||| |||||||||||||||| ||||| |||||| Sbjct 1889 TCTCTTTGGCGGGGAATTGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTAACCACT 1948 Query 60125 ATACTACCGAGGAT 60138 |||||||| | ||| Sbjct 1949 ATACTACCAAAGAT 1962 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571811574472040