Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017 -02-15] 843 sequences; 47,573,060 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq744 188 7e-43 >seq744 Length=38458 Score = 188 bits (208), Expect = 7e-43 Identities = 545/835 (65%), Gaps = 8/835 (1%) Strand=Plus/Plus Query 13915 TTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTTTC 13974 |||||| ||| || | |||||||||||||| || || |||| || || || | || Sbjct 30544 TTGATAGTCAGAGACACGCTTTTCAAAGAAGTTGGTCTTGCCTTGAAGAGAGATCATGTC 30603 Query 13975 CATAAAATCAAATGGATTTGTTGACATAAACACTTTATCACAACCTAGTTCTAATAGTAA 14034 |||||| ||||||||||| || | ||| | | || ||| | || || | | | | Sbjct 30604 CATAAAGTCAAATGGATTGGTAGCCATGTAAATCTTGTCAAATCCAAGAGCAACCATGAG 30663 Query 14035 TCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTTT 14094 | ||| |||| ||| || || ||||| |||| ||| || ||||||| || || || Sbjct 30664 ACGATCAGCAACGAATTCGATGTATTGGCACATCAAAGCAGAATTCATGCCGATGAGAGC 30723 Query 14095 TACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAATAAT 14154 || |||| || || |||||||| | ||| || ||||| || || ||| Sbjct 30724 AACGGGAAGAGCATCCGTCAAAAATTCCTGTTCAATGCTGACAGCTTCCAAGATGATATC 30783 Query 14155 CGTAATAATTTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAAATC 14214 | | | ||| | |||| | | ||||| |||| | | ||| ||||| || Sbjct 30784 CTTGACGCGTTCTTGGCTAGGACGCTTACGAAGATGGGTAAATAAAAGACAAGCAAAGTC 30843 Query 14215 ACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAA 14274 | ||||||||| ||||| | || || | ||| || ||||| || || |||||||| Sbjct 30844 AGTATGAAGGCCTTCATCACGACAGATCAATTCATTGCTGAATGTCAAACCAGGCATCAA 30903 Query 14275 TCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAAC 14334 || ||||| || | |||||| || | ||| || || || || ||||| || || || || Sbjct 30904 ACCACGTTTCTTGAGCCAAAAAATGGAAGCAAAGGAACCAGAGAAGAAAATACCTTCGAC 30963 Query 14335 TGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTCT 14394 |||||||| || | | || || |||| || | || | || ||||| || Sbjct 30964 AGCAGCAAAGGCAACAAGACGCTCAGCAAAAGAACCGTTAGAG---GAAATCCACTTGAA 31020 Query 14395 AGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATGTTC 14454 ||||| |||| ||| |||| ||| || || || ||||||||| ||| | ||| Sbjct 31021 GGCCCAATCAGCCTTTCTTTTGATACAAGGGATAGTGTCAATAGCAGAAAAGAGCATTTC 31080 Query 14455 CTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTAT 14514 ||||||| || | || || || ||||| | | || || |||| | ||| || Sbjct 31081 TTTCTCTTGGTTATCTTTGATATAAGTGTCAATCAAAAGACTGTAAGTTTCTGCGTGAAT 31140 Query 14515 GTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTG-ACCATTGTACCTCTG 14573 ||||| || || ||||| ||||| |||||| ||||||| | | ||| || || Sbjct 31141 ATTTTCAATCATGATTTGAAAGCCATAGAAACATTTAGCTTCAGGAATCTTG-ACTTCAT 31199 Query 14574 AGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCA 14633 |||| ||| |||| ||||||||||| || ||||| | | ||||| || || | Sbjct 31200 CACAAAAGTTTTGAACCAAGTTTTCATTAACAATGCCATCTGAACCAGCAAAGAAGGCTA 31259 Query 14634 ATATGTTTTTAATAAAGTA---TTGCTCTTCATTGCTGAGTTTTTTCCAATCGGCTAAAT 14690 | | | |||||| | || | ||| | | |||| |||||| | | Sbjct 31260 AGACGCGAGAGATAAAGAAGCGTTCGTTTTCGGTCATCTTGTTTTCCCAATCATGAAGGT 31319 Query 14691 CCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCAACAGCTTTTTTATA 14745 |||| | ||| | ||| ||| |||||||||| ||| ||||||| ||||| Sbjct 31320 CCTTGCTCAAATCGATTTCTTCAGCTGTCCAAAAGGAAGCTTCAGCTTTCTTATA 31374 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482340517283240