Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017 -02-15] 843 sequences; 47,573,060 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq578 223 3e-53 seq744 138 1e-27 seq723 127 2e-24 seq812 118 9e-22 seq810 96.9 3e-15 >seq578 Length=440600 Score = 223 bits (246), Expect = 3e-53 Identities = 437/642 (68%), Gaps = 8/642 (1%) Strand=Plus/Minus Query 23342 TCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGC 23401 ||||| || |||| || ||||| || |||| || || ||||| || || || || | Sbjct 115926 TCAACACGCTTCATGAAGAGATCGGGAGTCCAGAGGGCATAGAAGAGGTCACGTGCTCTG 115867 Query 23402 ACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCAC 23461 ||||| || || ||| |||||| | ||||| || || || | ||| | ||||| Sbjct 115866 ACCTCTTCCTTACCGTGGTTCTTGCGAAGGTCCAAGAACTCAAAGATGTCGGAGTGCCAG 115807 Query 23462 GGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGG 23521 ||||| ||||| | || || || || || | ||| || |||||||| || ||||| | Sbjct 115806 GGCTCCAGGTAGATAGCGAAAGCACCAGGGCGCTTGTTCCCGCCCTGGTCAACGTATCTT 115747 Query 23522 GCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCC 23581 || ||||||||| |||||| ||||| || || || |||||||| | ||| || || Sbjct 115746 GCAGTGTTGTTGAACACTCGAAGCATAGGGACAAGCCCGTTGGAAGTTCCGT-TAGTACC 115688 Query 23582 GCCACACTC-GAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGA 23640 || | |||||| | || || | ||| |||| || ||| || || || | | Sbjct 115687 ACCGATGTAAGAACCTGTAGCACGGATACGGTGGACGTTGAGACCAATACCACCCGCAGT 115628 Query 23641 TTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTT 23700 || || ||||| || || |||| ||||| ||||| ||||| ||||||||||| || Sbjct 115627 CTTGGAGATCATGGCACAAGTCTTCAAGGTGTCATAGATACCCTCAATGCTGTCCTCCTT 115568 Query 23701 GGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGT 23760 | ||| | ||| || || | || |||| | || ||| |||| |||||| || Sbjct 115567 CATATCGATAAGGAAGCAGGAGGCCAGCTGCGGCTGAGGAGTACCGGCGTTGAACAGAGT 115508 Query 23761 CGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATC 23820 ||| |||||| || |||||| | ||||| |||||||| || ||||| | || Sbjct 115507 CGGCGAGGCGTGAGTGAAGTATTTCTGGGACATCAGATTGTAGGTCTCGATAACCTTCTC 115448 Query 23821 AATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCT---C 23877 | ||| || ||||| || |||| || || ||||| ||||||| ||||| | || | Sbjct 115447 GAGGTCATCACCGTGGATTCCGACCGCAACACGCATAATCATGTGCTGAGGACGCTCAGC 115388 Query 23878 GACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATA 23937 ||| | || || || || |||||| || |||| || || || ||||| || || Sbjct 115387 AACCTT---TCCATTGATGCGGAGCAGATACGATCGTTCCAGAGTCTTGAATCCGAAGTA 115331 Query 23938 GTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATTCAA 23979 | ||||| || ||||| || | || || || || ||||| Sbjct 115330 TTGGTAGTTGAAATCACGGTCATAAACAATAGCGGAGTTCAA 115289 >seq744 Length=38458 Score = 138 bits (152), Expect = 1e-27 Identities = 461/710 (65%), Gaps = 13/710 (2%) Strand=Plus/Minus Query 57689 CGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATT 57748 ||| || || || || || | || ||||| |||||||| || || ||||| ||| || Sbjct 31264 CGTCTTAGCCTTCTTTGCTGGTTCAGATGGCATTGTTAATGAAAACTTGGTTCAAAACTT 31205 Query 57749 TTCACAAGAAGTGCAAG-TGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTG 57807 || | ||||| |||| | | || || | ||| || || || |||||| | |||| Sbjct 31204 TTGTGATGAAGT-CAAGATTCCTGAAGCTAAATGTTTCTATGGCTTTCAAATCATGATTG 31146 Query 57808 AAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGACG 57867 |||| | || |||||| || || | || || || || | || || ||| | | Sbjct 31145 AAAATATTCACGCAGAAACTTACAGTCTTTTGATTGACACTTATATCAAAGATAACCAAG 31086 Query 57868 AGAAACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAGAGT 57927 ||||| | || || || || || || || || ||| | ||||| || | Sbjct 31085 AGAAAGAAATGCTCTTTTCTGCTATTGACACTATCCCTTGTATCAAAAGAAAGGCTGATT 31026 Query 57928 GGTCAATCAAATGGATAAAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCG 57987 || | |||| ||||| | | | | | || || ||| | || | || || | Sbjct 31025 GGGCCTTCAAGTGGATTTC---CTCTAACGGTTCTTTTGCTGAGCGTCTTGTTGCCTTTG 30969 Query 57988 CCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAAC 58047 | || ||||||||||| ||||| || || |||||| | || |||||| | ||||||| Sbjct 30968 CTGCTGTCGAAGGTATTTTCTTCTCTGGTTCCTTTGCTTCCATTTTTTGGCTCAAGAAAC 30909 Query 58048 GCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCC 58107 | || ||||||| || |||| || ||||| || ||||| | || || || || || | Sbjct 30908 GTGGTTTGATGCCTGGTTTGACATTCAGCAATGAATTGATCTGTCGTGATGAAGGCCTTC 30849 Query 58108 ATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTC--AATAAACCGACGCGGGATCG 58165 ||||||| ||||| || || | || | | ||| || || || | | || || Sbjct 30848 ATACTGACTTTGCTTGTCT--TTTATTTACCCATCTTCGTAAGCGTCCTAGCCAAGAACG 30791 Query 58166 CATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCGAAGCCCT 58225 | || ||| || ||| || || ||| || ||| | || ||| | || || || || Sbjct 30790 CGTCAAGGATATCATCTTGGAAGCTGTCAGCATTGAACAGGAATTTTTGACGGATGCTCT 30731 Query 58226 ACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAGTTTGTTGC 58285 || || || | |||| ||||| || |||||||| | ||||| || || ||||| Sbjct 30730 TCCCGTTGCTCTCATCGGCATGAATTCTGCTTTGATGTGCCAATACATCGAATTCGTTGC 30671 Query 58286 CGACAGACTTTTGCTCGAACT--GATTGGAGAGCGTCATTACAACACGAAAAATCCGTTT 58343 || | || || | | || |||| || | | ||||| | | ||||| ||| Sbjct 30670 TGATCGTCTCATGGTTGCTCTTGGATTTGACAAGAT--TTACATGGCTACCAATCCATTT 30613 Query 58344 GATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGAAAA 58393 || |||||| | ||||||| || | |||||||| ||||| || ||||| Sbjct 30612 GACTTTATGGACATGATCTCTCTTCAAGGCAAGACCAACTTCTTTGAAAA 30563 >seq723 Length=18298 Score = 127 bits (140), Expect = 2e-24 Identities = 210/303 (69%), Gaps = 0/303 (0%) Strand=Plus/Plus Query 23668 AGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACAT 23727 ||| ||||||||||| ||||| ||||||||||| | || | ||| || ||||| Sbjct 6155 AGTATCGTAGATGCCTTCGATACTGTCCTCTTTCATTTGAACAAGGAAGCAACTAGACAA 6214 Query 23728 TTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATT 23787 ||| | ||| || ||| | || ||||| ||| || | || || ||||||||| | Sbjct 6215 TTGAGGTTTAGGTGTACCAGCGTTGAACAATGTAGGTGTAGCATGAGTAAAGTATTTAGA 6274 Query 23788 CGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGC 23847 ||||| |||| || || || |||| || | ||| | ||||| || || || || Sbjct 6275 TGACATAAGATCATAGGTTCTGAAGGCGCTTTCTAGGTCATTACCGTGAATGCCAATAGC 6334 Query 23848 GACGCGCATCATCATGTATTGAGGTCTCTCGACCGTGACGCCGTTAATTTTGAACAGATA 23907 || ||||| |||||||||||||||| || || | || || || || |||| || Sbjct 6335 AACACGCATGATCATGTATTGAGGTCGTTCAACGATTTCGTTATTGATCTTTAACAAGTA 6394 Query 23908 TGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAAGTCACGATCGTGCACTAT 23967 ||||| | ||||||||| ||||| ||| | | | ||| || | |||||| | ||| Sbjct 6395 ACTACGTTCTAACGTTTTAAAGCCAAAGAAGTTAAAATCAAAATCTCTATCGTGAATTAT 6454 Query 23968 GGC 23970 ||| Sbjct 6455 GGC 6457 >seq812 Length=913560 Score = 118 bits (130), Expect = 9e-22 Identities = 167/232 (72%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| ||||||||||| ||||| || || || | || || ||| |||| Sbjct 528979 ATGCAGATTTTCGTCAAGACTCTGACCGGCAAGACTATTACTCTGGAAGTCGAATCGTCA 528920 Query 31253 GACAGTGTCGAAACGGTCAAACAGAG-AATAGCG--GACAAGGAAGGCGTGCCGCCCGAC 31309 || | |||| | ||||| ||| || | | || || |||||| | || |||||| Sbjct 528919 GATACCATCGATAACGTCAA---GAGCAAGATCCAAGATAAAGAAGGCATCCCTCCCGAC 528863 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 ||||||||||| || || ||||| || ||||||||||| || || |||||| Sbjct 528862 CAGCAGCGTCTTATCTTTGCTGGTAAGCAGTTGGAAGATGGCCGCACCTTGTCCGATTAC 528803 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 |||||||| || || || ||||| || || || || | ||| | || |||| Sbjct 528802 AACATTCAGAAGGAGTCTACTCTCCACCTTGTCCTCCGCCTGCGTGGTGGTA 528751 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| ||||| || |||||| |||| ||||| || ||||| | || |||||| | | Sbjct 528751 ATGCAGATTTTTGTTAAGACTTTGACTGGCAAGACTATCACATTGGAGGTTGAATCCAGC 528692 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | || || | || ||||||||||| | || || |||||| Sbjct 528691 GACACAATTGACAACGTGAAGAGCAAGATTCAAGACAAGGAAGGTATCCCTCCTGACCAG 528632 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || || ||||| || ||| |||| ||| | || || ||| || ||| Sbjct 528631 CAGCGCCTGATCTTTGCTGGTAAGCAGCTGGAGGACGGTCGTACCTTGTCCGACTACAAC 528572 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACT 31410 || || || ||||| || || || ||||| || |||| Sbjct 528571 ATCCAGAAGGAATCTACCCTGCACCTGGTTCTGCGACT 528534 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/215 (70%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| || || || || || |||||| |||| ||||| | ||| Sbjct 529207 ATGCAGATCTTCGTGAAGACCCTTACTGGAAAGACTATCACCCTCGAGGTTGAGTCTTCC 529148 Query 31253 GACAGTGTCGAAACGGTCAAACAGAG-AATAGC--GGACAAGGAAGGCGTGCCGCCCGAC 31309 |||| |||| | ||||| ||| || | | ||| ||||| || | || |||||| Sbjct 529147 GACACCATCGACAACGTCAA---GAGCAAGATCCAGGATAAGGAGGGTATCCCTCCCGAC 529091 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 ||||| ||||| || |||||||| || ||| | || || || | ||| || Sbjct 529090 CAGCAACGTCTGATCTTCGCTGGAAAGCAGCTTGAGGATGGCCGCACACTCTCCGACTAC 529031 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| || || || ||||| ||||| || || || Sbjct 529030 AACATCCAGAAGGAGTCGACCCTTCACCTCGTCCT 528996 >seq810 Length=1034423 Score = 96.9 bits (106), Expect = 3e-15 Identities = 134/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 31202 TTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTC 31261 ||||| ||||| ||||| || || || || ||| |||| || || ||||||||| || Sbjct 582831 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGATGTCGAGTCGTCCGACACGATC 582890 Query 31262 GAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTA 31321 || | ||||| | || ||||||||| ||| | || || |||||||||||||| Sbjct 582891 GACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGTCTG 582950 Query 31322 ATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAA 31381 || ||||| || || ||| | ||||| ||| ||||||| || ||||| || || Sbjct 582951 ATCTTCGCCGGAAAGCAGCTCGAAGATGGCCGCACTCTGAGCGACTACAACATCCAGAAG 583010 Query 31382 GAATCGAC 31389 | || ||| Sbjct 583011 GTATGGAC 583018 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445761702736560