Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017
-02-15] 843 sequences; 47,573,060 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq578 223 3e-53
seq744 138 1e-27
seq723 127 2e-24
seq812 118 9e-22
seq810 96.9 3e-15
>seq578
Length=440600
Score = 223 bits (246), Expect = 3e-53
Identities = 437/642 (68%), Gaps = 8/642 (1%)
Strand=Plus/Minus
Query 23342 TCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGC 23401
||||| || |||| || ||||| || |||| || || ||||| || || || || |
Sbjct 115926 TCAACACGCTTCATGAAGAGATCGGGAGTCCAGAGGGCATAGAAGAGGTCACGTGCTCTG 115867
Query 23402 ACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCAC 23461
||||| || || ||| |||||| | ||||| || || || | ||| | |||||
Sbjct 115866 ACCTCTTCCTTACCGTGGTTCTTGCGAAGGTCCAAGAACTCAAAGATGTCGGAGTGCCAG 115807
Query 23462 GGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGG 23521
||||| ||||| | || || || || || | ||| || |||||||| || ||||| |
Sbjct 115806 GGCTCCAGGTAGATAGCGAAAGCACCAGGGCGCTTGTTCCCGCCCTGGTCAACGTATCTT 115747
Query 23522 GCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCC 23581
|| ||||||||| |||||| ||||| || || || |||||||| | ||| || ||
Sbjct 115746 GCAGTGTTGTTGAACACTCGAAGCATAGGGACAAGCCCGTTGGAAGTTCCGT-TAGTACC 115688
Query 23582 GCCACACTC-GAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGA 23640
|| | |||||| | || || | ||| |||| || ||| || || || | |
Sbjct 115687 ACCGATGTAAGAACCTGTAGCACGGATACGGTGGACGTTGAGACCAATACCACCCGCAGT 115628
Query 23641 TTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTT 23700
|| || ||||| || || |||| ||||| ||||| ||||| ||||||||||| ||
Sbjct 115627 CTTGGAGATCATGGCACAAGTCTTCAAGGTGTCATAGATACCCTCAATGCTGTCCTCCTT 115568
Query 23701 GGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGT 23760
| ||| | ||| || || | || |||| | || ||| |||| |||||| ||
Sbjct 115567 CATATCGATAAGGAAGCAGGAGGCCAGCTGCGGCTGAGGAGTACCGGCGTTGAACAGAGT 115508
Query 23761 CGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATC 23820
||| |||||| || |||||| | ||||| |||||||| || ||||| | ||
Sbjct 115507 CGGCGAGGCGTGAGTGAAGTATTTCTGGGACATCAGATTGTAGGTCTCGATAACCTTCTC 115448
Query 23821 AATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCT---C 23877
| ||| || ||||| || |||| || || ||||| ||||||| ||||| | || |
Sbjct 115447 GAGGTCATCACCGTGGATTCCGACCGCAACACGCATAATCATGTGCTGAGGACGCTCAGC 115388
Query 23878 GACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATA 23937
||| | || || || || |||||| || |||| || || || ||||| || ||
Sbjct 115387 AACCTT---TCCATTGATGCGGAGCAGATACGATCGTTCCAGAGTCTTGAATCCGAAGTA 115331
Query 23938 GTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATTCAA 23979
| ||||| || ||||| || | || || || || |||||
Sbjct 115330 TTGGTAGTTGAAATCACGGTCATAAACAATAGCGGAGTTCAA 115289
>seq744
Length=38458
Score = 138 bits (152), Expect = 1e-27
Identities = 461/710 (65%), Gaps = 13/710 (2%)
Strand=Plus/Minus
Query 57689 CGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATT 57748
||| || || || || || | || ||||| |||||||| || || ||||| ||| ||
Sbjct 31264 CGTCTTAGCCTTCTTTGCTGGTTCAGATGGCATTGTTAATGAAAACTTGGTTCAAAACTT 31205
Query 57749 TTCACAAGAAGTGCAAG-TGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTG 57807
|| | ||||| |||| | | || || | ||| || || || |||||| | ||||
Sbjct 31204 TTGTGATGAAGT-CAAGATTCCTGAAGCTAAATGTTTCTATGGCTTTCAAATCATGATTG 31146
Query 57808 AAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGACG 57867
|||| | || |||||| || || | || || || || | || || ||| | |
Sbjct 31145 AAAATATTCACGCAGAAACTTACAGTCTTTTGATTGACACTTATATCAAAGATAACCAAG 31086
Query 57868 AGAAACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAGAGT 57927
||||| | || || || || || || || || ||| | ||||| || |
Sbjct 31085 AGAAAGAAATGCTCTTTTCTGCTATTGACACTATCCCTTGTATCAAAAGAAAGGCTGATT 31026
Query 57928 GGTCAATCAAATGGATAAAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCG 57987
|| | |||| ||||| | | | | | || || ||| | || | || || |
Sbjct 31025 GGGCCTTCAAGTGGATTTC---CTCTAACGGTTCTTTTGCTGAGCGTCTTGTTGCCTTTG 30969
Query 57988 CCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAAC 58047
| || ||||||||||| ||||| || || |||||| | || |||||| | |||||||
Sbjct 30968 CTGCTGTCGAAGGTATTTTCTTCTCTGGTTCCTTTGCTTCCATTTTTTGGCTCAAGAAAC 30909
Query 58048 GCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCC 58107
| || ||||||| || |||| || ||||| || ||||| | || || || || || |
Sbjct 30908 GTGGTTTGATGCCTGGTTTGACATTCAGCAATGAATTGATCTGTCGTGATGAAGGCCTTC 30849
Query 58108 ATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTC--AATAAACCGACGCGGGATCG 58165
||||||| ||||| || || | || | | ||| || || || | | || ||
Sbjct 30848 ATACTGACTTTGCTTGTCT--TTTATTTACCCATCTTCGTAAGCGTCCTAGCCAAGAACG 30791
Query 58166 CATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCGAAGCCCT 58225
| || ||| || ||| || || ||| || ||| | || ||| | || || || ||
Sbjct 30790 CGTCAAGGATATCATCTTGGAAGCTGTCAGCATTGAACAGGAATTTTTGACGGATGCTCT 30731
Query 58226 ACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAGTTTGTTGC 58285
|| || || | |||| ||||| || |||||||| | ||||| || || |||||
Sbjct 30730 TCCCGTTGCTCTCATCGGCATGAATTCTGCTTTGATGTGCCAATACATCGAATTCGTTGC 30671
Query 58286 CGACAGACTTTTGCTCGAACT--GATTGGAGAGCGTCATTACAACACGAAAAATCCGTTT 58343
|| | || || | | || |||| || | | ||||| | | ||||| |||
Sbjct 30670 TGATCGTCTCATGGTTGCTCTTGGATTTGACAAGAT--TTACATGGCTACCAATCCATTT 30613
Query 58344 GATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGAAAA 58393
|| |||||| | ||||||| || | |||||||| ||||| || |||||
Sbjct 30612 GACTTTATGGACATGATCTCTCTTCAAGGCAAGACCAACTTCTTTGAAAA 30563
>seq723
Length=18298
Score = 127 bits (140), Expect = 2e-24
Identities = 210/303 (69%), Gaps = 0/303 (0%)
Strand=Plus/Plus
Query 23668 AGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACAT 23727
||| ||||||||||| ||||| ||||||||||| | || | ||| || |||||
Sbjct 6155 AGTATCGTAGATGCCTTCGATACTGTCCTCTTTCATTTGAACAAGGAAGCAACTAGACAA 6214
Query 23728 TTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATT 23787
||| | ||| || ||| | || ||||| ||| || | || || ||||||||| |
Sbjct 6215 TTGAGGTTTAGGTGTACCAGCGTTGAACAATGTAGGTGTAGCATGAGTAAAGTATTTAGA 6274
Query 23788 CGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGC 23847
||||| |||| || || || |||| || | ||| | ||||| || || || ||
Sbjct 6275 TGACATAAGATCATAGGTTCTGAAGGCGCTTTCTAGGTCATTACCGTGAATGCCAATAGC 6334
Query 23848 GACGCGCATCATCATGTATTGAGGTCTCTCGACCGTGACGCCGTTAATTTTGAACAGATA 23907
|| ||||| |||||||||||||||| || || | || || || || |||| ||
Sbjct 6335 AACACGCATGATCATGTATTGAGGTCGTTCAACGATTTCGTTATTGATCTTTAACAAGTA 6394
Query 23908 TGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAAGTCACGATCGTGCACTAT 23967
||||| | ||||||||| ||||| ||| | | | ||| || | |||||| | |||
Sbjct 6395 ACTACGTTCTAACGTTTTAAAGCCAAAGAAGTTAAAATCAAAATCTCTATCGTGAATTAT 6454
Query 23968 GGC 23970
|||
Sbjct 6455 GGC 6457
>seq812
Length=913560
Score = 118 bits (130), Expect = 9e-22
Identities = 167/232 (72%), Gaps = 6/232 (3%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| |||||||| ||||||||||| ||||| || || || | || || ||| ||||
Sbjct 528979 ATGCAGATTTTCGTCAAGACTCTGACCGGCAAGACTATTACTCTGGAAGTCGAATCGTCA 528920
Query 31253 GACAGTGTCGAAACGGTCAAACAGAG-AATAGCG--GACAAGGAAGGCGTGCCGCCCGAC 31309
|| | |||| | ||||| ||| || | | || || |||||| | || ||||||
Sbjct 528919 GATACCATCGATAACGTCAA---GAGCAAGATCCAAGATAAAGAAGGCATCCCTCCCGAC 528863
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369
||||||||||| || || ||||| || ||||||||||| || || ||||||
Sbjct 528862 CAGCAGCGTCTTATCTTTGCTGGTAAGCAGTTGGAAGATGGCCGCACCTTGTCCGATTAC 528803
Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|||||||| || || || ||||| || || || || | ||| | || ||||
Sbjct 528802 AACATTCAGAAGGAGTCTACTCTCCACCTTGTCCTCCGCCTGCGTGGTGGTA 528751
Score = 91.5 bits (100), Expect = 1e-13
Identities = 151/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| ||||| || |||||| |||| ||||| || ||||| | || |||||| | |
Sbjct 528751 ATGCAGATTTTTGTTAAGACTTTGACTGGCAAGACTATCACATTGGAGGTTGAATCCAGC 528692
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | || | || || | || ||||||||||| | || || ||||||
Sbjct 528691 GACACAATTGACAACGTGAAGAGCAAGATTCAAGACAAGGAAGGTATCCCTCCTGACCAG 528632
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
||||| || || || ||||| || ||| |||| ||| | || || ||| || |||
Sbjct 528631 CAGCGCCTGATCTTTGCTGGTAAGCAGCTGGAGGACGGTCGTACCTTGTCCGACTACAAC 528572
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACT 31410
|| || || ||||| || || || ||||| || ||||
Sbjct 528571 ATCCAGAAGGAATCTACCCTGCACCTGGTTCTGCGACT 528534
Score = 91.5 bits (100), Expect = 1e-13
Identities = 151/215 (70%), Gaps = 6/215 (3%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||||| ||||| || || || || || |||||| |||| ||||| | |||
Sbjct 529207 ATGCAGATCTTCGTGAAGACCCTTACTGGAAAGACTATCACCCTCGAGGTTGAGTCTTCC 529148
Query 31253 GACAGTGTCGAAACGGTCAAACAGAG-AATAGC--GGACAAGGAAGGCGTGCCGCCCGAC 31309
|||| |||| | ||||| ||| || | | ||| ||||| || | || ||||||
Sbjct 529147 GACACCATCGACAACGTCAA---GAGCAAGATCCAGGATAAGGAGGGTATCCCTCCCGAC 529091
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369
||||| ||||| || |||||||| || ||| | || || || | ||| ||
Sbjct 529090 CAGCAACGTCTGATCTTCGCTGGAAAGCAGCTTGAGGATGGCCGCACACTCTCCGACTAC 529031
Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
||||| || || || ||||| ||||| || || ||
Sbjct 529030 AACATCCAGAAGGAGTCGACCCTTCACCTCGTCCT 528996
>seq810
Length=1034423
Score = 96.9 bits (106), Expect = 3e-15
Identities = 134/188 (71%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 31202 TTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTC 31261
||||| ||||| ||||| || || || || ||| |||| || || ||||||||| ||
Sbjct 582831 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGATGTCGAGTCGTCCGACACGATC 582890
Query 31262 GAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTA 31321
|| | ||||| | || ||||||||| ||| | || || ||||||||||||||
Sbjct 582891 GACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGTCTG 582950
Query 31322 ATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAA 31381
|| ||||| || || ||| | ||||| ||| ||||||| || ||||| || ||
Sbjct 582951 ATCTTCGCCGGAAAGCAGCTCGAAGATGGCCGCACTCTGAGCGACTACAACATCCAGAAG 583010
Query 31382 GAATCGAC 31389
| || |||
Sbjct 583011 GTATGGAC 583018
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445761702736560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |