Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017 -02-15] 843 sequences; 47,573,060 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq744 132 1e-25 seq578 100 6e-16 >seq744 Length=38458 Score = 132 bits (146), Expect = 1e-25 Identities = 300/447 (67%), Gaps = 7/447 (2%) Strand=Plus/Minus Query 101916 TTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCT 101975 |||||||||||||||| || ||||| || ||||| |||| | || || |||||||| | Sbjct 30980 TTGTTGCCTTTGCTGCTGTCGAAGGTATTTTCTTCTCTGGTTCCTTTGCTTCCATTTTTT 30921 Query 101976 GGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGG 102035 || ||||||| | ||| | |||||||| | || | | |||||| || || | | | | Sbjct 30920 GGCTCAAGAAACGTGGTTTGATGCCTGGTTTGACATTCAGCAATGAATTGATCTGTCGTG 30861 Query 102036 ACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCC 102095 | ||||| |||||| |||||||| || | | || | | || || || Sbjct 30860 ATGAAGGCCTTCATACTGACTTTGCTTGTCTTTTATTTACCCA--TCTTCGTAAGCGTCC 30803 Query 102096 CATCAAGAGAAAGGATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAACAAGAATTTC 102155 | | | |||| | | || || || ||||| ||| | |||||||| |||||| Sbjct 30802 TAGCCA-AGAACGCGTCAAGGATATCATCTTGGAAGCTGTCAGCATTGAACAGGAATTTT 30744 Query 102156 TCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAA--CTGCAAGTTGATGAGCCAGTA 102213 | || | | | || || ||| | | || ||||| |||| |||||| |||| || Sbjct 30743 TGACGGATGCTCTTCCCGTTGCTCTCATCGGCATGAATTCTGC--TTTGATGTGCCAATA 30686 Query 102214 CATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGCACTATAATGT 102273 ||| ||||| || || ||| || |||||| | ||| | || ||| || | | Sbjct 30685 CATCGAATTCGTTGCTGATCGTCTCATGGTTGCTCTTGGATTTGACAAGATTTACATGGC 30626 Query 102274 TACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTTGA 102333 |||||| || || || ||||||| || || || | ||||||||||| ||||| Sbjct 30625 TACCAATCCATTTGACTTTATGGACATGATCTCTCTTCAAGGCAAGACCAACTTCTTTGA 30566 Query 102334 AAAGAGAGTCGCCGAGTATCAACGTGC 102360 |||| | ||| | || ||||||||||| Sbjct 30565 AAAGCGTGTCTCTGACTATCAACGTGC 30539 >seq578 Length=440600 Score = 100 bits (110), Expect = 6e-16 Identities = 176/251 (70%), Gaps = 4/251 (2%) Strand=Plus/Minus Query 94792 CCTCCAGCAGTCTTGGAGATGATTGC-CGCCTCCTTAAGAGTATCATAAATACCCTCAAT 94850 || || |||||||||||||| || || | || | ||| || ||||| ||||||||||| Sbjct 115638 CCACCCGCAGTCTTGGAGATCATGGCACAAGTCTTCAAG-GTGTCATAGATACCCTCAAT 115580 Query 94851 GCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGACT-GTTCCAC 94909 ||| || || | | | | ||||||||| |||| || || || ||| || || Sbjct 115579 GCTGTCCTCCTTCATATCGATAAGGAAGCAGGAGGCCAGCTGCGGC-TGAGGAGTACCGG 115521 Query 94910 AATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATATGTTT 94969 || ||||| || || || || || || || || | | ||||| |||| || || | Sbjct 115520 CGTTGAACAGAGTCGGCGAGGCGTGAGTGAAGTATTTCTGGGACATCAGATTGTAGGTCT 115461 Query 94970 CAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCATGTCCT 95029 | || || | || ||| ||||| || ||||| || |||||||||||||||| || Sbjct 115460 CGATAACCTTCTCGAGGTCATCACCGTGGATTCCGACCGCAACACGCATAATCATGTGCT 115401 Query 95030 GAGGGCGCTCA 95040 |||| |||||| Sbjct 115400 GAGGACGCTCA 115390 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989573311565065