Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017
-02-15] 843 sequences; 47,573,060 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq744 132 1e-25
seq578 100 6e-16
>seq744
Length=38458
Score = 132 bits (146), Expect = 1e-25
Identities = 300/447 (67%), Gaps = 7/447 (2%)
Strand=Plus/Minus
Query 101916 TTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCT 101975
|||||||||||||||| || ||||| || ||||| |||| | || || |||||||| |
Sbjct 30980 TTGTTGCCTTTGCTGCTGTCGAAGGTATTTTCTTCTCTGGTTCCTTTGCTTCCATTTTTT 30921
Query 101976 GGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGG 102035
|| ||||||| | ||| | |||||||| | || | | |||||| || || | | | |
Sbjct 30920 GGCTCAAGAAACGTGGTTTGATGCCTGGTTTGACATTCAGCAATGAATTGATCTGTCGTG 30861
Query 102036 ACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCC 102095
| ||||| |||||| |||||||| || | | || | | || || ||
Sbjct 30860 ATGAAGGCCTTCATACTGACTTTGCTTGTCTTTTATTTACCCA--TCTTCGTAAGCGTCC 30803
Query 102096 CATCAAGAGAAAGGATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAACAAGAATTTC 102155
| | | |||| | | || || || ||||| ||| | |||||||| ||||||
Sbjct 30802 TAGCCA-AGAACGCGTCAAGGATATCATCTTGGAAGCTGTCAGCATTGAACAGGAATTTT 30744
Query 102156 TCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAA--CTGCAAGTTGATGAGCCAGTA 102213
| || | | | || || ||| | | || ||||| |||| |||||| |||| ||
Sbjct 30743 TGACGGATGCTCTTCCCGTTGCTCTCATCGGCATGAATTCTGC--TTTGATGTGCCAATA 30686
Query 102214 CATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGCACTATAATGT 102273
||| ||||| || || ||| || |||||| | ||| | || ||| || | |
Sbjct 30685 CATCGAATTCGTTGCTGATCGTCTCATGGTTGCTCTTGGATTTGACAAGATTTACATGGC 30626
Query 102274 TACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTTGA 102333
|||||| || || || ||||||| || || || | ||||||||||| |||||
Sbjct 30625 TACCAATCCATTTGACTTTATGGACATGATCTCTCTTCAAGGCAAGACCAACTTCTTTGA 30566
Query 102334 AAAGAGAGTCGCCGAGTATCAACGTGC 102360
|||| | ||| | || |||||||||||
Sbjct 30565 AAAGCGTGTCTCTGACTATCAACGTGC 30539
>seq578
Length=440600
Score = 100 bits (110), Expect = 6e-16
Identities = 176/251 (70%), Gaps = 4/251 (2%)
Strand=Plus/Minus
Query 94792 CCTCCAGCAGTCTTGGAGATGATTGC-CGCCTCCTTAAGAGTATCATAAATACCCTCAAT 94850
|| || |||||||||||||| || || | || | ||| || ||||| |||||||||||
Sbjct 115638 CCACCCGCAGTCTTGGAGATCATGGCACAAGTCTTCAAG-GTGTCATAGATACCCTCAAT 115580
Query 94851 GCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGACT-GTTCCAC 94909
||| || || | | | | ||||||||| |||| || || || ||| || ||
Sbjct 115579 GCTGTCCTCCTTCATATCGATAAGGAAGCAGGAGGCCAGCTGCGGC-TGAGGAGTACCGG 115521
Query 94910 AATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATATGTTT 94969
|| ||||| || || || || || || || || | | ||||| |||| || || |
Sbjct 115520 CGTTGAACAGAGTCGGCGAGGCGTGAGTGAAGTATTTCTGGGACATCAGATTGTAGGTCT 115461
Query 94970 CAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCATGTCCT 95029
| || || | || ||| ||||| || ||||| || |||||||||||||||| ||
Sbjct 115460 CGATAACCTTCTCGAGGTCATCACCGTGGATTCCGACCGCAACACGCATAATCATGTGCT 115401
Query 95030 GAGGGCGCTCA 95040
|||| ||||||
Sbjct 115400 GAGGACGCTCA 115390
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989573311565065
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |