Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017
-02-15] 843 sequences; 47,573,060 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq744 259 6e-64
seq578 140 4e-28
seq657 116 5e-21
seq723 111 2e-19
>seq744
Length=38458
Score = 259 bits (286), Expect = 6e-64
Identities = 569/846 (67%), Gaps = 9/846 (1%)
Strand=Plus/Plus
Query 33293 TTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTC 33352
||| || ||| ||||| ||||| || || || || || |||| | || || | ||
Sbjct 30544 TTGATAGTCAGAGACACGCTTTTCAAAGAAGTTGGTCTTGCCTTGAAGAGAGATCATGTC 30603
Query 33353 CATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCCCAATTCAGAAATCAA 33412
||| || ||||| ||||||||| | ||||||| || | |||||| | || || |
Sbjct 30604 CATAAAGTCAAATGGATTGGTAGCCATGTAAATCTTGTCAAATCCAAGAGCAACCATGAG 30663
Query 33413 TCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATGAGTTT 33472
| ||| || |||||||| || ||| ||||| || ||||||| || |||||
Sbjct 30664 ACGATCAGCAACGAATTCGATGTATTGGCACATCAAAGCAGAATTCATGCCGATGAGAGC 30723
Query 33473 AACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACCGCATTTGTTATAATAAA 33532
||| |||||||| | || | |||||| ||||||||| || || | || |||
Sbjct 30724 AACGGGAAGAGCATCCGTCAAAAATTCCTGTTCAATGCTGACAGCTTCCAAGATGATATC 30783
Query 33533 TCTAACGGTTTCTTCACTCGGTGGATGTAATAA-ATGTTTAAACATCAAACATGCGAAAT 33591
| ||| ||||| || || | | || || ||| |||| | | ||| || || |
Sbjct 30784 CTTGACGCGTTCTTGGCTAGGACGCT-TACGAAGATGGGTAAATAAAAGACAAGCAAAGT 30842
Query 33592 CGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTA 33651
| || || || || || | || || ||||| || || || | || ||||| |
Sbjct 30843 CAGTATGAAGGCCTTCATCACGACAGATCAATTCATTGCTGAATGTCAAACCAGGCATCA 30902
Query 33652 GGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTA 33711
||||| || || |||||||| |||||||| || || || || ||||| || ||||| |
Sbjct 30903 AACCACGTTTCTTGAGCCAAAAAATGGAAGCAAAGGAACCAGAGAAGAAAATACCTTCGA 30962
Query 33712 CTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCATGTATCCACTTTTGAG 33771
| ||||||||||||| ||| | ||| || || || | |||||||| |
Sbjct 30963 CAGCAGCAAAGGCAACAAGACGCTCAGCAAAAGAACCGTTAGAGGAAATCCACTTGAAGG 31022
Query 33772 CCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttt 33831
||||||| ||||| |||| | |||||| || || || || ||| |||||| | ||
Sbjct 31023 CCCAATCAGCCTTTCTTTTGATACAAGGGATAGTGTCAATAGCAGAAAAGAGCATTTCTT 31082
Query 33832 tttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGT 33891
| || | ||||||| | |||||| || ||||||||||| || |||| | ||||| |
Sbjct 31083 TCTCTTGGTTATCTTTGATATAAGTGTCAATCAAAAGACTGTAAGTTTCTGCGTGAATAT 31142
Query 33892 TTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTAC 33951
||||||| || ||||| || ||||||||| |||| || | ||||| ||||| ||
Sbjct 31143 TTTCAATCATGATTTGAAAGCCATAGAAACATTTAGCTTCAGGAATCTTGACTTCATCAC 31202
Query 33952 AAAATCGTTCTG--CTAAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAACGCCAA 34009
|||| ||| || | || |||||||| || || ||||| | ||||| || || ||
Sbjct 31203 AAAA--GTTTTGAACCAAGTTTTCATTAACAATGCCATCTGAACCAGCAAAGAAGGCTAA 31260
Query 34010 TACATGTTTTATAAAATATTTTTCGTCT--GGTGTTAGT-TTATTCCAATCATTGATATC 34066
|| | ||||| | ||||| | ||| | | || | |||||||| | ||
Sbjct 31261 GACGCGAGAGATAAAGAAGCGTTCGTTTTCGGTCATCTTGTTTTCCCAATCATGAAGGTC 31320
Query 34067 TTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATT 34126
|| | ||| | |||||| |||||||||| || || || || || ||||| | |
Sbjct 31321 CTTGCTCAAATCGATTTCTTCAGCTGTCCAAAAGGAAGCTTCAGCTTTCTTATAGAATTG 31380
Query 34127 CCAGAT 34132
||||||
Sbjct 31381 CCAGAT 31386
>seq578
Length=440600
Score = 140 bits (154), Expect = 4e-28
Identities = 543/842 (64%), Gaps = 16/842 (2%)
Strand=Plus/Minus
Query 63248 CCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-A 63306
||| || |||| | || || || ||||| |||||||| ||| |||| || || ||| |
Sbjct 115942 CCAGTCACCGTTAGACTCAACACGCTTCATGAAGAGATCGGGAGTCCAGAGGGC-ATAGA 115884
Query 63307 ATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCA 63366
| || || | || ||| || || || || ||||| ||| || | |||| | |
Sbjct 115883 AGAGGTCACGTGCTCTGACCTCTTCCTTACCGTGGTTCTTGCGAAGGTCCAAGAACTCAA 115824
Query 63367 TAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTC 63426
|| || || ||||| || |||| ||| || || | | | ||||| || ||||| || |
Sbjct 115823 AGATGTCGGAGTGCCAGGGCTCCAGGTAGATAGCGAAAGCACCAGGGCGCTTGTTCCCGC 115764
Query 63427 CCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTG 63486
|||| || | |||||| || ||||| || | |||| | ||| || | || ||||| |
Sbjct 115763 CCTGGTCAACGTATCTTGCAGTGTTGTTGAACACTCGAAGCATAGGGACAAGCCCGTTGG 115704
Query 63487 ATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAA--TTGATAG 63544
| | || || ||||| ||| || || | ||||| ||| | |||| |
Sbjct 115703 AAGTTCCGTTAGTACCACCGATGTAAGAACCTGTAGCACGGATACGGTGGACGTTGA--G 115646
Query 63545 ACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCC 63604
||| || || || || | || ||||| | || || || || ||||||||||| ||
Sbjct 115645 ACCAATACCACCCGCAGTCTTGGAGATCATGGCACAAGTCTTCAAGGTGTCATAGATACC 115586
Query 63605 TTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGT 63664
|| ||||| || || |||| | | || || ||| | || || | ||| |||
Sbjct 115585 CTCAATGCTGTCCTCCTTCATATCGATAAGGAAGCAGGAGGCCAGCTGCGGCTGAGGAGT 115526
Query 63665 TCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTA 63724
|| || || || | || || || ||||| || || |||| | || | ||||||||
Sbjct 115525 ACCGGCGTTGAACAGAGTCGGCGAGGCGTGAGTGAAGTATTTCTGGGACATCAGATTGTA 115466
Query 63725 CGTCTCAATAGCTGAGTCTATATC-CCATTGATGAATTCCTACTGCGACACGCATTAACA 63783
||||| ||| | || | || || | || ||||| || || |||||||| | ||
Sbjct 115465 GGTCTCGATAACCTTCTCGAGGTCATCACCG-TGGATTCCGACCGCAACACGCATAATCA 115407
Query 63784 TGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAG 63843
|||||||||| | ||| ||| || || || | || || ||| ||||| ||
Sbjct 115406 TGTGCTGAGGACGCTCAGCAACCTTTCCATTGATGCGGAGCAGATACGATCGTTCCAGAG 115347
Query 63844 TTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAG 63901
| || || || || || | ||| ||||| || || || |||| |||| | || || |
Sbjct 115346 TCTTGAATCCGAAGTATTGGTAGTTGAAA--TCACGGTCATAAACAATAGCGGAGTTCAA 115289
Query 63902 CTTATCCTTATATTTGTTAACTATATCCATGGTAATACTT--GAAATAATCGGAGAATGT 63959
| |||| || || ||| || || || | ||| || || ||||| | |
Sbjct 115288 TTCATCCGCATGCTTCATAATGATTTCATACGT--TTCTTTCGATATCATCGGCGCCGGC 115231
Query 63960 TTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttt 64019
|| ||| || || || ||||||| | | | |||| || || | || | ||
Sbjct 115230 TTATTATTCTTCGGGTTGACATAGTGGTAAAGGTCCTGGATGACCAGAGAGAACTGCTTC 115171
Query 64020 tttGTTTCCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAATCCGGA 64079
|| || | |||||| || || || | |||||| | || || || || ||||| || ||
Sbjct 115170 TTGGTCTGCTTGTGGAGGTTGGACACGGCTATACGCGCAGCGAGGATAGCATAGTCTGGG 115111
Query 64080 TG 64081
||
Sbjct 115110 TG 115109
>seq657
Length=446211
Score = 116 bits (128), Expect = 5e-21
Identities = 118/154 (77%), Gaps = 0/154 (0%)
Strand=Plus/Plus
Query 33573 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAA 33632
|||| || ||| ||||| ||| |||||||||||| || | | || | ||||||||
Sbjct 212063 AACAGCAGACAAGCGAAGTCGGTGTGCAGACCCTCATCACGAGAGATCAGCTCGTTAGAG 212122
Query 33633 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCG 33692
|| || || || ||||| ||||||||||| || ||||| || || || ||||| || ||
Sbjct 212123 AAGGTCAGACCAGGCATGAGGCCACGCTTCTTCAGCCAGAAGATAGAGGCGAAAGAGCCA 212182
Query 33693 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAA 33726
|| |||||||| || || || ||||| |||||||
Sbjct 212183 GAGAAGAAGATACCCTCAACAGCAGCGAAGGCAA 212216
>seq723
Length=18298
Score = 111 bits (122), Expect = 2e-19
Identities = 278/421 (66%), Gaps = 5/421 (1%)
Strand=Plus/Plus
Query 62084 ATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTT 62143
||||||||| || || |||| || |||| | ||||| |||||| || | |||
Sbjct 4430 ATAGTACATGCCAGTCTTTAATCCCTTCTTCCAGGCATAAAAGTGCATAGAGGTCAATTT 4489
Query 62144 GGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCC 62203
| | | | || || || || | ||||||||||||| ||| ||||| || |||||
Sbjct 4490 GCCAAAGTTTGGTTCGGCAGTAAACAAATTCATAGATTGAGATTGGTCGATAAAAGCTCC 4549
Query 62204 CCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATAAAC 62263
|| || || ||||| | || || || |||||| ||| ||||| | ||||| || |
Sbjct 4550 TCTATCAGCGGCCATGTCAATAATAGTTCTTTGTGAAATCTCCCATACTGTTTTGTATAG 4609
Query 62264 TCGCTTAATATCTTCTGGAAGGTTTGTATTCTGAATGGAT----CCACCATCTACCATAA 62319
|| | ||| || |||| | | | | | ||||| || |||| | || |
Sbjct 4610 CTTTTTGAGATCATCAGGAACGCCGGGAATACG-TTGGATACTACCGCCATGAGCAATCA 4668
Query 62320 TCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCG 62379
|| | |||||||| | |||||||||||| | ||| | | | | | | ||||
Sbjct 4669 TCATGTTCTTGATGTTATCATTCCATAAATCGAGCTCAATGAGGTCATTCAATAAATGCT 4728
Query 62380 GGTTAACTACTTGGAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACG 62439
|||| |||| ||||||||| ||| || | || || |||||||| || || || |
Sbjct 4729 GGTTGACTATTTGGAATTCACCACTTTGAACACGACGCGTATAAATATTGCTAGTGTAAG 4788
Query 62440 GTTCCACCGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCA 62499
| || | | || ||||| ||||| |||||| ||| ||||| |||||||| || |
Sbjct 4789 GCTCGAAGCATTCGTTATTGCCCAATATTTGACTAGTGCTAGCAGTAGGCATAGGAGCAA 4848
Query 62500 C 62500
|
Sbjct 4849 C 4849
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629810963297040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |