Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017
-02-15] 843 sequences; 47,573,060 total letters
Query= NC_003389.1
Length=146454
Score E
Sequences producing significant alignments: (Bits) Value
seq744 190 2e-43
>seq744
Length=38458
Score = 190 bits (210), Expect = 2e-43
Identities = 486/728 (67%), Gaps = 19/728 (3%)
Strand=Plus/Plus
Query 11464 ATCTGCGACGAATTCTATATACTGAGACATTAAACAACAATTCATACCTATAAGATCCAC 11523
||| || |||||||| || || || |||| ||| | ||||||| || || ||| | ||
Sbjct 30667 ATCAGCAACGAATTCGATGTATTGGCACATCAAAGCAGAATTCATGCCGATGAGAGCAAC 30726
Query 11524 CGGAATAGCAACTGTCAAAAACTCCTTTTCTATATTAACCGCATCAATGATTATCGACGT 11583
|||| |||| | |||||||| |||| ||| || | || || || | ||| || | |
Sbjct 30727 GGGAAGAGCATCCGTCAAAAATTCCTGTTCAATGCTGACAGCTTCCAAGATGATATCCTT 30786
Query 11584 TATAACTTCCTTAGAT-GGTGGATGTAATAA-ATGTTTAAACATTAAACACGCAAAATCA 11641
| ||| || | | || | | || || ||| |||| | | ||| ||||| |||
Sbjct 30787 GACGCGTTC-TTGGCTAGGACGCT-TACGAAGATGGGTAAATAAAAGACAAGCAAAGTCA 30844
Query 11642 CAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCGGGCATCAAT 11701
||| | ||||| || | || || | |||||| ||||| || || ||||||||
Sbjct 30845 GTATGAAGGCCTTCATCACGACAGATCAATTCATTGCTGAATGTCAAACCAGGCATCAAA 30904
Query 11702 CCTCGtttttttATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATTCCCTCCACA 11761
|| ||||| || | |||||| || | |||||| |||||||| ||||| || || || |||
Sbjct 30905 CCACGTTTCTTGAGCCAAAAAATGGAAGCAAAGGAACCAGAGAAGAAAATACCTTCGACA 30964
Query 11762 GCTGCAAATGCTACTACTCTTTCTCCATAT--ACCTTGTTGCTAGATATCCATTTTCTGG 11819
|| ||||| || || | | || || | ||| ||| || ||||| || ||
Sbjct 30965 GCAGCAAAGGCAACAAGACGCTCAGCAAAAGAACC--GTTAGAGGAAATCCACTTGAAGG 31022
Query 11820 CCCAATCAGCTTTCTTTTTTACGCATTCCATTGTTTCTATAGCGTTAAATAAATGCATTT 11879
|||||||||| || |||| | || || || || ||||| ||| | ||||||
Sbjct 31023 CCCAATCAGCCTTTCTTTTGATACAAGGGATAGTGTCAATAGCAGAAAAGA---GCATTT 31079
Query 11880 -TTTCTATA--TTATCTCTTACATATGTATCTATTAATAAACTATACATTTCTGAATGAA 11936
||||| | |||||| | | ||| || || || || | ||| || |||||| ||||
Sbjct 31080 CTTTCTCTTGGTTATCTTTGATATAAGTGTCAATCAAAAGACTGTAAGTTTCTGCGTGAA 31139
Query 11937 TATTTTCCATAGCTATTTGAAATCCATAGAAACATCGTGCCTCTGAACACTGTACATCCA 11996
||||||| || |||||||| |||||||||||| || || | | || || ||
Sbjct 31140 TATTTTCAATCATGATTTGAAAGCCATAGAAACATTTAGCTTCAGGAATCTTGACTTCAT 31199
Query 11997 CATAAAATCTTTCCGCTAAATTCTCATTTACAATACCATCACTAGATGCAAAAAATGCTA 12056
|| |||| ||| | || || ||||| ||||| ||||| | ||||| || ||||
Sbjct 31200 CACAAAAGTTTTGAACCAAGTTTTCATTAACAATGCCATCTGAACCAGCAAAGAAGGCTA 31259
Query 12057 GTATATGTTTTATAAAGTATTTTTCGTCTTTAGTTAAT----TTATCCCAATCATCTAAA 12112
| | |||||| | ||||| ||| | | || || |||||||||| |
Sbjct 31260 AGACGCGAGAGATAAAGAAGCGTTCGT-TTTCGGTCATCTTGTTTTCCCAATCATGAAGG 31318
Query 12113 TCTTTTGATAAATCTACTTCTTCAACGGTCCAAAAACTTGCCACTGATTGTTTATACATT 12172
|| || ||||| | ||||||| | |||||||| || | | || ||||| | |
Sbjct 31319 TCCTTGCTCAAATCGATTTCTTCAGCTGTCCAAAAGGAAGCTTCAGCTTTCTTATAGAAT 31378
Query 12173 TTCCAGAT 12180
| ||||||
Sbjct 31379 TGCCAGAT 31386
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 468519862919920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |