Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017
-02-15] 843 sequences; 47,573,060 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq744 260 2e-64
seq578 127 3e-24
seq723 105 9e-18
seq657 98.7 1e-15
>seq744
Length=38458
Score = 260 bits (288), Expect = 2e-64
Identities = 572/849 (67%), Gaps = 15/849 (2%)
Strand=Plus/Plus
Query 35869 TTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTTTC 35928
||| || ||| ||||| ||||| || || || || || |||| | || || | ||
Sbjct 30544 TTGATAGTCAGAGACACGCTTTTCAAAGAAGTTGGTCTTGCCTTGAAGAGAGATCATGTC 30603
Query 35929 CATGAAATCGAATGGATTGATAACATTATAAAtttttttAAATCCCAATTCAGAAATCAA 35988
||| || || ||||||||| || | | ||||| || | |||||| | || || |
Sbjct 30604 CATAAAGTCAAATGGATTGGTAGCCATGTAAATCTTGTCAAATCCAAGAGCAACCATGAG 30663
Query 35989 TCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTT 36048
| ||| || || ||||| || ||| ||||| || ||||||| || || ||
Sbjct 30664 ACGATCAGCAACGAATTCGATGTATTGGCACATCAAAGCAGAATTCATGCCGATGAGAGC 30723
Query 36049 AACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAGA 36108
||| |||||||| | || | |||||| |||||||| ||| || || || |||
Sbjct 30724 AACGGGAAGAGCATCCGTCAAAAATTCCTGTTCAATGCTGACAGCTTCCAAGATGATATC 30783
Query 36109 TATTACTGTTTCTTCACTCGGTGGAT-ACAATAAATGTTTAAACATCAAACATGCGAAAT 36167
| || ||||| || || | | || | | ||| |||| | | ||| || || |
Sbjct 30784 CTTGACGCGTTCTTGGCTAGGACGCTTACGA-AGATGGGTAAATAAAAGACAAGCAAAGT 30842
Query 36168 CGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTA 36227
| || || || || || | || || ||||| ||| || || | || ||||| |
Sbjct 30843 CAGTATGAAGGCCTTCATCACGACAGATCAATTCATTGCTGAATGTCAAACCAGGCATCA 30902
Query 36228 GGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTA 36287
||||| || || |||||||| ||||| ||||| || ||||| |||||||| ||||| |
Sbjct 30903 AACCACGTTTCTTGAGCCAAAAAATGGAAGCAAAGGAACCAGAGAAGAAAATACCTTCGA 30962
Query 36288 CTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTGTCATGT---ATCCACTTTT 36344
| || |||||||||| ||| | ||| || || | || || | ||||||||
Sbjct 30963 CAGCAGCAAAGGCAACAAGACGCTCAGCAAAA---GAACCGTTAGAGGAAATCCACTTGA 31019
Query 36345 GAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGt 36404
|||||||| ||||| |||| | |||||| || || || |||||| |||||| |
Sbjct 31020 AGGCCCAATCAGCCTTTCTTTTGATACAAGGGATAGTGTCAATAGCAGAAAAGAGCATTT 31079
Query 36405 ttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAA 36464
||| || | ||||||| | ||| || |||||||||||||| || |||| | ||||
Sbjct 31080 CTTTCTCTTGGTTATCTTTGATATAAGTGTCAATCAAAAGACTGTAAGTTTCTGCGTGAA 31139
Query 36465 TGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTG 36524
| |||||||| |||||||| || ||||||||| |||| || | ||||| |||||
Sbjct 31140 TATTTTCAATCATGATTTGAAAGCCATAGAAACATTTAGCTTCAGGAATCTTGACTTCAT 31199
Query 36525 TACAAAATCGTTCTG--CTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGC 36582
|||||| ||| || | || |||||||| || || || || | ||||| || ||
Sbjct 31200 CACAAAA--GTTTTGAACCAAGTTTTCATTAACAATGCCATCTGAACCAGCAAAGAAGGC 31257
Query 36583 CAATACATGTTTTATAAAATATTTTTCGTTT--GGTGTTAGT-TTATTCCAATCATTGAT 36639
|| || | ||||| | ||||||| ||| | | || | |||||||| |
Sbjct 31258 TAAGACGCGAGAGATAAAGAAGCGTTCGTTTTCGGTCATCTTGTTTTCCCAATCATGAAG 31317
Query 36640 ATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACAT 36699
|| || | ||| | |||||| |||||||||| || || || || || ||||| |
Sbjct 31318 GTCCTTGCTCAAATCGATTTCTTCAGCTGTCCAAAAGGAAGCTTCAGCTTTCTTATAGAA 31377
Query 36700 ATTCCAGAT 36708
| ||||||
Sbjct 31378 TTGCCAGAT 31386
>seq578
Length=440600
Score = 127 bits (140), Expect = 3e-24
Identities = 434/667 (65%), Gaps = 12/667 (2%)
Strand=Plus/Minus
Query 66041 CCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-A 66099
||| || |||| | || || || ||||| |||||||| ||| |||| || || ||| |
Sbjct 115942 CCAGTCACCGTTAGACTCAACACGCTTCATGAAGAGATCGGGAGTCCAGAGGGC-ATAGA 115884
Query 66100 ATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCA 66159
| | || | | ||| || || || || ||||| ||| || | |||| | |
Sbjct 115883 AGAGGTCACGTGCTCTGACCTCTTCCTTACCGTGGTTCTTGCGAAGGTCCAAGAACTCAA 115824
Query 66160 TAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTC 66219
|| || | ||||| || |||| ||| || || | | | ||||| || ||||| || |
Sbjct 115823 AGATGTCGGAGTGCCAGGGCTCCAGGTAGATAGCGAAAGCACCAGGGCGCTTGTTCCCGC 115764
Query 66220 CCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGG 66279
|||| || | |||||| || ||||| || | |||| | ||| || | || || ||||
Sbjct 115763 CCTGGTCAACGTATCTTGCAGTGTTGTTGAACACTCGAAGCATAGGGACAAGCCCGTTGG 115704
Query 66280 ATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAA--TTGATAG 66337
| || || || || || ||| || || | ||||| ||| | |||| |
Sbjct 115703 AAGTTCCGTTAGTACCACCGATGTAAGAACCTGTAGCACGGATACGGTGGACGTTGA--G 115646
Query 66338 ACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCC 66397
||| || || || || | || ||||| | || || || || || |||||||| ||
Sbjct 115645 ACCAATACCACCCGCAGTCTTGGAGATCATGGCACAAGTCTTCAAGGTGTCATAGATACC 115586
Query 66398 CTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGT 66457
||| || || || ||| |||| | | || || ||| | || || | || |||
Sbjct 115585 CTCAATGCTGTCCTCCTTCATATCGATAAGGAAGCAGGAGGCCAGCTGCGGCTGAGGAGT 115526
Query 66458 TCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTA 66517
|| || || || | || || || ||||| || || |||| | || | ||||||||
Sbjct 115525 ACCGGCGTTGAACAGAGTCGGCGAGGCGTGAGTGAAGTATTTCTGGGACATCAGATTGTA 115466
Query 66518 CGTCTCAATAGCTGAGTCTATATCC-CATTGATGAATTCCTACTGCGACACGCATTAACA 66576
||||| ||| | || | || || | || ||||| || || |||||||| | ||
Sbjct 115465 GGTCTCGATAACCTTCTCGAGGTCATCACCG-TGGATTCCGACCGCAACACGCATAATCA 115407
Query 66577 TGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAG 66636
|||||||||| | ||| | | ||| || || | || || ||| ||||| ||
Sbjct 115406 TGTGCTGAGGACGCTCAGCAACCTTTCCATTGATGCGGAGCAGATACGATCGTTCCAGAG 115347
Query 66637 TTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAG 66694
| || || || || || | ||| ||||| || || || |||| |||| | ||||| |
Sbjct 115346 TCTTGAATCCGAAGTATTGGTAGTTGAAA--TCACGGTCATAAACAATAGCGGAGTTCAA 115289
Query 66695 TTTATCC 66701
|| ||||
Sbjct 115288 TTCATCC 115282
>seq723
Length=18298
Score = 105 bits (116), Expect = 9e-18
Identities = 277/421 (66%), Gaps = 5/421 (1%)
Strand=Plus/Plus
Query 64877 ATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTT 64936
||||||||| || || |||| || |||| | ||||| |||||| || | |||
Sbjct 4430 ATAGTACATGCCAGTCTTTAATCCCTTCTTCCAGGCATAAAAGTGCATAGAGGTCAATTT 4489
Query 64937 GGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCC 64996
| | | | || || || || | ||||||||||||| ||| ||||| || |||||
Sbjct 4490 GCCAAAGTTTGGTTCGGCAGTAAACAAATTCATAGATTGAGATTGGTCGATAAAAGCTCC 4549
Query 64997 CCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAAC 65056
|| || || ||||| | || || || |||||| ||| ||||| | ||||| || |
Sbjct 4550 TCTATCAGCGGCCATGTCAATAATAGTTCTTTGTGAAATCTCCCATACTGTTTTGTATAG 4609
Query 65057 TCGCTTAATATCTTCTGGAAGGTTTGTATTCTGAATGGAT----CCACCATCTGCCATAA 65112
|| | ||| || |||| | | | | | ||||| || |||| || || |
Sbjct 4610 CTTTTTGAGATCATCAGGAACGCCGGGAATACG-TTGGATACTACCGCCATGAGCAATCA 4668
Query 65113 TCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCG 65172
|| | |||||||| | |||||||||||| | ||| | | | | | | ||||
Sbjct 4669 TCATGTTCTTGATGTTATCATTCCATAAATCGAGCTCAATGAGGTCATTCAATAAATGCT 4728
Query 65173 GATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACG 65232
| || |||| ||| ||||| ||| || | || || |||||||| || || || |
Sbjct 4729 GGTTGACTATTTGGAATTCACCACTTTGAACACGACGCGTATAAATATTGCTAGTGTAAG 4788
Query 65233 GTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCA 65292
| || | | || ||||| ||||| |||||| ||| ||||| |||||||| || |
Sbjct 4789 GCTCGAAGCATTCGTTATTGCCCAATATTTGACTAGTGCTAGCAGTAGGCATAGGAGCAA 4848
Query 65293 C 65293
|
Sbjct 4849 C 4849
>seq657
Length=446211
Score = 98.7 bits (108), Expect = 1e-15
Identities = 114/154 (74%), Gaps = 0/154 (0%)
Strand=Plus/Plus
Query 36149 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 36208
|||| || ||| ||||| ||| ||| |||||||| || | | || | ||||| ||
Sbjct 212063 AACAGCAGACAAGCGAAGTCGGTGTGCAGACCCTCATCACGAGAGATCAGCTCGTTAGAG 212122
Query 36209 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 36268
|| || || || ||||| ||||||||||| || ||||| || || || || || || |||
Sbjct 212123 AAGGTCAGACCAGGCATGAGGCCACGCTTCTTCAGCCAGAAGATAGAGGCGAAAGAGCCA 212182
Query 36269 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAA 36302
|| ||||| || || || || || || |||||||
Sbjct 212183 GAGAAGAAGATACCCTCAACAGCAGCGAAGGCAA 212216
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658165864504120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |