Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017 -02-15] 843 sequences; 47,573,060 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq744 260 2e-64 seq578 127 3e-24 seq723 105 9e-18 seq657 98.7 1e-15 >seq744 Length=38458 Score = 260 bits (288), Expect = 2e-64 Identities = 572/849 (67%), Gaps = 15/849 (2%) Strand=Plus/Plus Query 35869 TTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTTTC 35928 ||| || ||| ||||| ||||| || || || || || |||| | || || | || Sbjct 30544 TTGATAGTCAGAGACACGCTTTTCAAAGAAGTTGGTCTTGCCTTGAAGAGAGATCATGTC 30603 Query 35929 CATGAAATCGAATGGATTGATAACATTATAAAtttttttAAATCCCAATTCAGAAATCAA 35988 ||| || || ||||||||| || | | ||||| || | |||||| | || || | Sbjct 30604 CATAAAGTCAAATGGATTGGTAGCCATGTAAATCTTGTCAAATCCAAGAGCAACCATGAG 30663 Query 35989 TCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTT 36048 | ||| || || ||||| || ||| ||||| || ||||||| || || || Sbjct 30664 ACGATCAGCAACGAATTCGATGTATTGGCACATCAAAGCAGAATTCATGCCGATGAGAGC 30723 Query 36049 AACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAGA 36108 ||| |||||||| | || | |||||| |||||||| ||| || || || ||| Sbjct 30724 AACGGGAAGAGCATCCGTCAAAAATTCCTGTTCAATGCTGACAGCTTCCAAGATGATATC 30783 Query 36109 TATTACTGTTTCTTCACTCGGTGGAT-ACAATAAATGTTTAAACATCAAACATGCGAAAT 36167 | || ||||| || || | | || | | ||| |||| | | ||| || || | Sbjct 30784 CTTGACGCGTTCTTGGCTAGGACGCTTACGA-AGATGGGTAAATAAAAGACAAGCAAAGT 30842 Query 36168 CGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTA 36227 | || || || || || | || || ||||| ||| || || | || ||||| | Sbjct 30843 CAGTATGAAGGCCTTCATCACGACAGATCAATTCATTGCTGAATGTCAAACCAGGCATCA 30902 Query 36228 GGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTA 36287 ||||| || || |||||||| ||||| ||||| || ||||| |||||||| ||||| | Sbjct 30903 AACCACGTTTCTTGAGCCAAAAAATGGAAGCAAAGGAACCAGAGAAGAAAATACCTTCGA 30962 Query 36288 CTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTGTCATGT---ATCCACTTTT 36344 | || |||||||||| ||| | ||| || || | || || | |||||||| Sbjct 30963 CAGCAGCAAAGGCAACAAGACGCTCAGCAAAA---GAACCGTTAGAGGAAATCCACTTGA 31019 Query 36345 GAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGt 36404 |||||||| ||||| |||| | |||||| || || || |||||| |||||| | Sbjct 31020 AGGCCCAATCAGCCTTTCTTTTGATACAAGGGATAGTGTCAATAGCAGAAAAGAGCATTT 31079 Query 36405 ttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAA 36464 ||| || | ||||||| | ||| || |||||||||||||| || |||| | |||| Sbjct 31080 CTTTCTCTTGGTTATCTTTGATATAAGTGTCAATCAAAAGACTGTAAGTTTCTGCGTGAA 31139 Query 36465 TGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTG 36524 | |||||||| |||||||| || ||||||||| |||| || | ||||| ||||| Sbjct 31140 TATTTTCAATCATGATTTGAAAGCCATAGAAACATTTAGCTTCAGGAATCTTGACTTCAT 31199 Query 36525 TACAAAATCGTTCTG--CTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGC 36582 |||||| ||| || | || |||||||| || || || || | ||||| || || Sbjct 31200 CACAAAA--GTTTTGAACCAAGTTTTCATTAACAATGCCATCTGAACCAGCAAAGAAGGC 31257 Query 36583 CAATACATGTTTTATAAAATATTTTTCGTTT--GGTGTTAGT-TTATTCCAATCATTGAT 36639 || || | ||||| | ||||||| ||| | | || | |||||||| | Sbjct 31258 TAAGACGCGAGAGATAAAGAAGCGTTCGTTTTCGGTCATCTTGTTTTCCCAATCATGAAG 31317 Query 36640 ATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACAT 36699 || || | ||| | |||||| |||||||||| || || || || || ||||| | Sbjct 31318 GTCCTTGCTCAAATCGATTTCTTCAGCTGTCCAAAAGGAAGCTTCAGCTTTCTTATAGAA 31377 Query 36700 ATTCCAGAT 36708 | |||||| Sbjct 31378 TTGCCAGAT 31386 >seq578 Length=440600 Score = 127 bits (140), Expect = 3e-24 Identities = 434/667 (65%), Gaps = 12/667 (2%) Strand=Plus/Minus Query 66041 CCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-A 66099 ||| || |||| | || || || ||||| |||||||| ||| |||| || || ||| | Sbjct 115942 CCAGTCACCGTTAGACTCAACACGCTTCATGAAGAGATCGGGAGTCCAGAGGGC-ATAGA 115884 Query 66100 ATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCA 66159 | | || | | ||| || || || || ||||| ||| || | |||| | | Sbjct 115883 AGAGGTCACGTGCTCTGACCTCTTCCTTACCGTGGTTCTTGCGAAGGTCCAAGAACTCAA 115824 Query 66160 TAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTC 66219 || || | ||||| || |||| ||| || || | | | ||||| || ||||| || | Sbjct 115823 AGATGTCGGAGTGCCAGGGCTCCAGGTAGATAGCGAAAGCACCAGGGCGCTTGTTCCCGC 115764 Query 66220 CCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGG 66279 |||| || | |||||| || ||||| || | |||| | ||| || | || || |||| Sbjct 115763 CCTGGTCAACGTATCTTGCAGTGTTGTTGAACACTCGAAGCATAGGGACAAGCCCGTTGG 115704 Query 66280 ATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAA--TTGATAG 66337 | || || || || || ||| || || | ||||| ||| | |||| | Sbjct 115703 AAGTTCCGTTAGTACCACCGATGTAAGAACCTGTAGCACGGATACGGTGGACGTTGA--G 115646 Query 66338 ACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCC 66397 ||| || || || || | || ||||| | || || || || || |||||||| || Sbjct 115645 ACCAATACCACCCGCAGTCTTGGAGATCATGGCACAAGTCTTCAAGGTGTCATAGATACC 115586 Query 66398 CTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGT 66457 ||| || || || ||| |||| | | || || ||| | || || | || ||| Sbjct 115585 CTCAATGCTGTCCTCCTTCATATCGATAAGGAAGCAGGAGGCCAGCTGCGGCTGAGGAGT 115526 Query 66458 TCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTA 66517 || || || || | || || || ||||| || || |||| | || | |||||||| Sbjct 115525 ACCGGCGTTGAACAGAGTCGGCGAGGCGTGAGTGAAGTATTTCTGGGACATCAGATTGTA 115466 Query 66518 CGTCTCAATAGCTGAGTCTATATCC-CATTGATGAATTCCTACTGCGACACGCATTAACA 66576 ||||| ||| | || | || || | || ||||| || || |||||||| | || Sbjct 115465 GGTCTCGATAACCTTCTCGAGGTCATCACCG-TGGATTCCGACCGCAACACGCATAATCA 115407 Query 66577 TGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAG 66636 |||||||||| | ||| | | ||| || || | || || ||| ||||| || Sbjct 115406 TGTGCTGAGGACGCTCAGCAACCTTTCCATTGATGCGGAGCAGATACGATCGTTCCAGAG 115347 Query 66637 TTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAG 66694 | || || || || || | ||| ||||| || || || |||| |||| | ||||| | Sbjct 115346 TCTTGAATCCGAAGTATTGGTAGTTGAAA--TCACGGTCATAAACAATAGCGGAGTTCAA 115289 Query 66695 TTTATCC 66701 || |||| Sbjct 115288 TTCATCC 115282 >seq723 Length=18298 Score = 105 bits (116), Expect = 9e-18 Identities = 277/421 (66%), Gaps = 5/421 (1%) Strand=Plus/Plus Query 64877 ATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTT 64936 ||||||||| || || |||| || |||| | ||||| |||||| || | ||| Sbjct 4430 ATAGTACATGCCAGTCTTTAATCCCTTCTTCCAGGCATAAAAGTGCATAGAGGTCAATTT 4489 Query 64937 GGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCC 64996 | | | | || || || || | ||||||||||||| ||| ||||| || ||||| Sbjct 4490 GCCAAAGTTTGGTTCGGCAGTAAACAAATTCATAGATTGAGATTGGTCGATAAAAGCTCC 4549 Query 64997 CCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAAC 65056 || || || ||||| | || || || |||||| ||| ||||| | ||||| || | Sbjct 4550 TCTATCAGCGGCCATGTCAATAATAGTTCTTTGTGAAATCTCCCATACTGTTTTGTATAG 4609 Query 65057 TCGCTTAATATCTTCTGGAAGGTTTGTATTCTGAATGGAT----CCACCATCTGCCATAA 65112 || | ||| || |||| | | | | | ||||| || |||| || || | Sbjct 4610 CTTTTTGAGATCATCAGGAACGCCGGGAATACG-TTGGATACTACCGCCATGAGCAATCA 4668 Query 65113 TCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCG 65172 || | |||||||| | |||||||||||| | ||| | | | | | | |||| Sbjct 4669 TCATGTTCTTGATGTTATCATTCCATAAATCGAGCTCAATGAGGTCATTCAATAAATGCT 4728 Query 65173 GATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACG 65232 | || |||| ||| ||||| ||| || | || || |||||||| || || || | Sbjct 4729 GGTTGACTATTTGGAATTCACCACTTTGAACACGACGCGTATAAATATTGCTAGTGTAAG 4788 Query 65233 GTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCA 65292 | || | | || ||||| ||||| |||||| ||| ||||| |||||||| || | Sbjct 4789 GCTCGAAGCATTCGTTATTGCCCAATATTTGACTAGTGCTAGCAGTAGGCATAGGAGCAA 4848 Query 65293 C 65293 | Sbjct 4849 C 4849 >seq657 Length=446211 Score = 98.7 bits (108), Expect = 1e-15 Identities = 114/154 (74%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 36149 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 36208 |||| || ||| ||||| ||| ||| |||||||| || | | || | ||||| || Sbjct 212063 AACAGCAGACAAGCGAAGTCGGTGTGCAGACCCTCATCACGAGAGATCAGCTCGTTAGAG 212122 Query 36209 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 36268 || || || || ||||| ||||||||||| || ||||| || || || || || || ||| Sbjct 212123 AAGGTCAGACCAGGCATGAGGCCACGCTTCTTCAGCCAGAAGATAGAGGCGAAAGAGCCA 212182 Query 36269 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAA 36302 || ||||| || || || || || || ||||||| Sbjct 212183 GAGAAGAAGATACCCTCAACAGCAGCGAAGGCAA 212216 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658165864504120