Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017 -02-15] 843 sequences; 47,573,060 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq657 107 1e-18 seq744 93.3 3e-14 >seq657 Length=446211 Score = 107 bits (118), Expect = 1e-18 Identities = 285/433 (66%), Gaps = 2/433 (0%) Strand=Plus/Minus Query 22750 GCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGCTG 22809 ||||| || |||||||| || || | || ||||| || || || | || ||||||||| Sbjct 212214 GCCTTCGCTGCTGTTGAGGGTATCTTCTTCTCTGGCTCTTTCGCCTCTATCTTCTGGCTG 212155 Query 22810 AAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACGAA 22869 ||||| ||| |||||||| || || | || || |||||| |||| ||||| || Sbjct 212154 AAGAAGCGTGGCCTCATGCCTGGTCTGACCTTCTCTAACGAGCTGATCTCTCGTGATGAG 212095 Query 22870 GGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAATGGCAAACAAACCGTGTCAG 22929 ||||| ||| ||||| |||||| ||||||| || || ||| || | | Sbjct 212094 GGTCTGCACACCGACTTCGCTTGTCTGCTGTTCTCCCACCTGAACAACCGCCCCTCACCT 212035 Query 22930 GACGATGCACATCAAATCATATCTGATGCCGTTGACATTGAGACGGCTTTCTTCCAAGAG 22989 || | || | | ||||| ||||||||| ||||||||| || ||| | || Sbjct 212034 GAGGTTGTCGAGAAGATCATCGTTGATGCCGTCGACATTGAGCAGGAGTTCCTGACGGAC 211975 Query 22990 GCACTAAAGACACCCCTACTTGGTATGAATAGTGACAGTATGAGACTGTACATACAGTTT 23049 || || |||| ||||||||||| | ||| | | |||||| |||| Sbjct 211974 GCCCTCCCCGTTGCCCTCCTTGGTATGAACTCCAAGCTCATGTGCCAGTACATCGAGTTC 211915 Query 23050 GTTGCAGATCGCCTGCTCGATGCCCTGGGTTATGCAAAGATGTATAACGTTGCCAATCCA 23109 ||||| || |||||||| | | || || | ||| || |||| | || || Sbjct 211914 GTTGCCGACCGCCTGCTGGTCTCTCTTGGCAACAAGAAGTACTACAACGCCACAAACCCC 211855 Query 23110 TTTGATTTCATGGATAACAT-TAGCATTGAAGGTAAAACAAACTTCTTTGAACGCCGTGT 23168 || || |||||||| ||||| | || | | || || || |||||||| || ||||| Sbjct 211854 TTCGACTTCATGGACAACATCTCGC-TCGCTGGCAAGACCAACTTCTTCGAGAAGCGTGT 211796 Query 23169 GAGTGAATATCAG 23181 |||| || ||| Sbjct 211795 CGGTGACTACCAG 211783 >seq744 Length=38458 Score = 93.3 bits (102), Expect = 3e-14 Identities = 365/558 (65%), Gaps = 27/558 (5%) Strand=Plus/Minus Query 22348 TACAAGAAGGCCGTTGCGTCTTTTTGGACCGTTGAGGAGGTGGATCTTAGTACTGATGTA 22407 || ||||| || | || || |||||||| | ||| || | ||| | || | || | Sbjct 31374 TATAAGAAAGCTGAAGCTTCCTTTTGGACAGCTGAAGAAATCGATTTGAGCAAGGACCTT 31315 Query 22408 CGCCATTGGACAGAAAAACTGACCGAGGCTGAGCGCAGGTTCATGTCTCACATACTGGCA 22467 | ||||| | | || ||||||| || ||| || || |||| | | | || Sbjct 31314 CATGATTGGGAAAACAAGATGACCGAAAACGAACGCTTCTTTATCTCTCGCGTCTTAGCC 31255 Query 22468 TTCTTTGCAATGG--CAGATGGCATTGTAGGCGACAACCTTGTGTGCAA---TTTCGCAA 22522 |||||||| ||| ||||||||||||| || ||| ||| || ||| ||| | | Sbjct 31254 TTCTTTGC--TGGTTCAGATGGCATTGTTAATGAAAAC-TTG-GTTCAAAACTTTTGTGA 31199 Query 22523 AAGAACTTGACTATATTCCAGAAGCCAGAGCTTTCTATGGGTTTCAGGTGGCAATGGAAA 22582 ||| | | | ||||| ||||| | | ||||||||| ||||| | || |||| Sbjct 31198 T-GAAGT---CAAGATTCCTGAAGCTAAATGTTTCTATGGCTTTCAAATCATGATTGAAA 31143 Query 22583 ATATACATGCTGAAATGTATACTCAGCTGATTATCACATTAGTAGCTAAAGAGAATCAAG 22642 |||| || || |||| || | || ||||| ||| ||| || | ||||| || |||| Sbjct 31142 ATATTCACGCAGAAACTTACAGTCTTTTGATTGACAC-TTA-TATC-AAAGATAACCAAG 31086 Query 22643 CC---GCATTG---TTTTCAGCAGCTGAAGATATGCCATGTGTTAAAGCCAAGGCACAGT 22696 | | || ||||| || ||| ||| || ||| | ||| ||||| | | Sbjct 31085 AGAAAGAAATGCTCTTTTCTGCTATTGACACTATCCCTTGTATCAAAAGAAAGGCTGATT 31026 Query 22697 GGGC-TGCACAATGGCTGAATGCCACACATAAGTCTATCGCAACACGTCTCTTGGCCTTT 22755 |||| | || | ||| | | || | | ||| | || ||||| | |||||| Sbjct 31025 GGGCCTTCA-AGTGGAT---TTCCTCTAACGGTTCTTTTGCTGAGCGTCTTGTTGCCTTT 30970 Query 22756 GCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGCTGAAGAAA 22815 || ||||| ||||| | | || ||||| || ||||| |||| || ||||| |||||| Sbjct 30969 GCTGCTGTCGAAGGTATTTTCTTCTCTGGTTCCTTTGCTTCCATTTTTTGGCTCAAGAAA 30910 Query 22816 CGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACGAAGGTCTA 22875 ||| | ||||| || ||| | || ||| || ||||| | ||||| ||||| || Sbjct 30909 CGTGGTTTGATGCCTGGTTTGACATTCAGCAATGAATTGATCTGTCGTGATGAAGGCCTT 30850 Query 22876 CACTGTGACTTTGCTTGT 22893 || ||||||||||||| Sbjct 30849 CATACTGACTTTGCTTGT 30832 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356229940033729