Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017
-02-15] 843 sequences; 47,573,060 total letters
Query= NC_003494.1
Length=111362
Score E
Sequences producing significant alignments: (Bits) Value
seq657 107 1e-18
seq744 93.3 3e-14
>seq657
Length=446211
Score = 107 bits (118), Expect = 1e-18
Identities = 285/433 (66%), Gaps = 2/433 (0%)
Strand=Plus/Minus
Query 22750 GCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGCTG 22809
||||| || |||||||| || || | || ||||| || || || | || |||||||||
Sbjct 212214 GCCTTCGCTGCTGTTGAGGGTATCTTCTTCTCTGGCTCTTTCGCCTCTATCTTCTGGCTG 212155
Query 22810 AAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACGAA 22869
||||| ||| |||||||| || || | || || |||||| |||| ||||| ||
Sbjct 212154 AAGAAGCGTGGCCTCATGCCTGGTCTGACCTTCTCTAACGAGCTGATCTCTCGTGATGAG 212095
Query 22870 GGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAATGGCAAACAAACCGTGTCAG 22929
||||| ||| ||||| |||||| ||||||| || || ||| || | |
Sbjct 212094 GGTCTGCACACCGACTTCGCTTGTCTGCTGTTCTCCCACCTGAACAACCGCCCCTCACCT 212035
Query 22930 GACGATGCACATCAAATCATATCTGATGCCGTTGACATTGAGACGGCTTTCTTCCAAGAG 22989
|| | || | | ||||| ||||||||| ||||||||| || ||| | ||
Sbjct 212034 GAGGTTGTCGAGAAGATCATCGTTGATGCCGTCGACATTGAGCAGGAGTTCCTGACGGAC 211975
Query 22990 GCACTAAAGACACCCCTACTTGGTATGAATAGTGACAGTATGAGACTGTACATACAGTTT 23049
|| || |||| ||||||||||| | ||| | | |||||| ||||
Sbjct 211974 GCCCTCCCCGTTGCCCTCCTTGGTATGAACTCCAAGCTCATGTGCCAGTACATCGAGTTC 211915
Query 23050 GTTGCAGATCGCCTGCTCGATGCCCTGGGTTATGCAAAGATGTATAACGTTGCCAATCCA 23109
||||| || |||||||| | | || || | ||| || |||| | || ||
Sbjct 211914 GTTGCCGACCGCCTGCTGGTCTCTCTTGGCAACAAGAAGTACTACAACGCCACAAACCCC 211855
Query 23110 TTTGATTTCATGGATAACAT-TAGCATTGAAGGTAAAACAAACTTCTTTGAACGCCGTGT 23168
|| || |||||||| ||||| | || | | || || || |||||||| || |||||
Sbjct 211854 TTCGACTTCATGGACAACATCTCGC-TCGCTGGCAAGACCAACTTCTTCGAGAAGCGTGT 211796
Query 23169 GAGTGAATATCAG 23181
|||| || |||
Sbjct 211795 CGGTGACTACCAG 211783
>seq744
Length=38458
Score = 93.3 bits (102), Expect = 3e-14
Identities = 365/558 (65%), Gaps = 27/558 (5%)
Strand=Plus/Minus
Query 22348 TACAAGAAGGCCGTTGCGTCTTTTTGGACCGTTGAGGAGGTGGATCTTAGTACTGATGTA 22407
|| ||||| || | || || |||||||| | ||| || | ||| | || | || |
Sbjct 31374 TATAAGAAAGCTGAAGCTTCCTTTTGGACAGCTGAAGAAATCGATTTGAGCAAGGACCTT 31315
Query 22408 CGCCATTGGACAGAAAAACTGACCGAGGCTGAGCGCAGGTTCATGTCTCACATACTGGCA 22467
| ||||| | | || ||||||| || ||| || || |||| | | | ||
Sbjct 31314 CATGATTGGGAAAACAAGATGACCGAAAACGAACGCTTCTTTATCTCTCGCGTCTTAGCC 31255
Query 22468 TTCTTTGCAATGG--CAGATGGCATTGTAGGCGACAACCTTGTGTGCAA---TTTCGCAA 22522
|||||||| ||| ||||||||||||| || ||| ||| || ||| ||| | |
Sbjct 31254 TTCTTTGC--TGGTTCAGATGGCATTGTTAATGAAAAC-TTG-GTTCAAAACTTTTGTGA 31199
Query 22523 AAGAACTTGACTATATTCCAGAAGCCAGAGCTTTCTATGGGTTTCAGGTGGCAATGGAAA 22582
||| | | | ||||| ||||| | | ||||||||| ||||| | || ||||
Sbjct 31198 T-GAAGT---CAAGATTCCTGAAGCTAAATGTTTCTATGGCTTTCAAATCATGATTGAAA 31143
Query 22583 ATATACATGCTGAAATGTATACTCAGCTGATTATCACATTAGTAGCTAAAGAGAATCAAG 22642
|||| || || |||| || | || ||||| ||| ||| || | ||||| || ||||
Sbjct 31142 ATATTCACGCAGAAACTTACAGTCTTTTGATTGACAC-TTA-TATC-AAAGATAACCAAG 31086
Query 22643 CC---GCATTG---TTTTCAGCAGCTGAAGATATGCCATGTGTTAAAGCCAAGGCACAGT 22696
| | || ||||| || ||| ||| || ||| | ||| ||||| | |
Sbjct 31085 AGAAAGAAATGCTCTTTTCTGCTATTGACACTATCCCTTGTATCAAAAGAAAGGCTGATT 31026
Query 22697 GGGC-TGCACAATGGCTGAATGCCACACATAAGTCTATCGCAACACGTCTCTTGGCCTTT 22755
|||| | || | ||| | | || | | ||| | || ||||| | ||||||
Sbjct 31025 GGGCCTTCA-AGTGGAT---TTCCTCTAACGGTTCTTTTGCTGAGCGTCTTGTTGCCTTT 30970
Query 22756 GCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGCTGAAGAAA 22815
|| ||||| ||||| | | || ||||| || ||||| |||| || ||||| ||||||
Sbjct 30969 GCTGCTGTCGAAGGTATTTTCTTCTCTGGTTCCTTTGCTTCCATTTTTTGGCTCAAGAAA 30910
Query 22816 CGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACGAAGGTCTA 22875
||| | ||||| || ||| | || ||| || ||||| | ||||| ||||| ||
Sbjct 30909 CGTGGTTTGATGCCTGGTTTGACATTCAGCAATGAATTGATCTGTCGTGATGAAGGCCTT 30850
Query 22876 CACTGTGACTTTGCTTGT 22893
|| |||||||||||||
Sbjct 30849 CATACTGACTTTGCTTGT 30832
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 356229940033729
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |