Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017
-02-15] 843 sequences; 47,573,060 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq657 113 4e-20
seq812 102 8e-17
seq609 102 8e-17
>seq657
Length=446211
Score = 113 bits (124), Expect = 4e-20
Identities = 160/225 (71%), Gaps = 0/225 (0%)
Strand=Plus/Minus
Query 52837 GAGGCCGTCGACATTGAAAAAGAGTTTTTTACGGACGCTTTACCCGTATCATTGTTGGGC 52896
|| |||||||||||||| | ||||| | |||||||| | ||||| | | | ||
Sbjct 212010 GATGCCGTCGACATTGAGCAGGAGTTCCTGACGGACGCCCTCCCCGTTGCCCTCCTTGGT 211951
Query 52897 ATGAACGCGACCATGATGTGCGAGTACATCGAGTTTGTTGCGGACAGACTGTTGATGCAG 52956
|||||| | | | |||||| ||||||||||||| ||||| ||| | ||| || |
Sbjct 211950 ATGAACTCCAAGCTCATGTGCCAGTACATCGAGTTCGTTGCCGACCGCCTGCTGGTCTCT 211891
Query 52957 CTCGGTCAGCCGAAATACTATAATGCGCGTAACCCCTTTTCGTTTATGAACAACATATCG 53016
|| || | ||| ||||| || || |||||||| || ||| ||||||| |||
Sbjct 211890 CTTGGCAACAAGAAGTACTACAACGCCACAAACCCCTTCGACTTCATGGACAACATCTCG 211831
Query 53017 CTCGAGGGCAAAACAAACTTTTTCGAGAGACGTGTGGGCGAGTAC 53061
|||| ||||| || ||||| ||||||| ||||| || || |||
Sbjct 211830 CTCGCTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTAC 211786
>seq812
Length=913560
Score = 102 bits (112), Expect = 8e-17
Identities = 143/201 (71%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627
|||||||| || |||||||| |||||| || |||| ||||| | ||| ||||||
Sbjct 528783 GTAGACTCCTTCTGAATGTTGTAATCGGACAAGGTGCGGCCATCTTCCAACTGCTTACCA 528842
Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687
||| |||| ||||| ||||| |||||||| ||||||||||| || ||| || ||
Sbjct 528843 GCAAAGATAAGACGCTGCTGGTCGGGAGGGATGCCTTCTTTATCTTGGATCTTGCTCTTG 528902
Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747
| | || | || || | | || || || | || | ||||||||||||| ||
Sbjct 528903 ACGTTATCGATGGTATCTGACGATTCGACTTCCAGAGTAATAGTCTTGCCGGTCAGAGTC 528962
Query 139748 TTTACGAATATTTGCATAGCT 139768
|| ||||| || |||||| ||
Sbjct 528963 TTGACGAAAATCTGCATACCT 528983
Score = 89.7 bits (98), Expect = 5e-13
Identities = 151/219 (69%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 139550 CGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAG 139609
|||| || | ||||| || ||||| || || ||||| || ||| | |||||
Sbjct 528993 CGCAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGTGTGCGGCCA 529052
Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669
|| || ||||| || ||||| |||||||||||||||| |||||||| || || || ||
Sbjct 529053 TCCTCAAGCTGCTTTCCAGCGAAGATCAGACGTTGCTGGTCGGGAGGGATACCCTCCTTA 529112
Query 139670 TCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACC 139729
|| ||| || || | | || | ||||||| | ||| ||||| | ||| |
Sbjct 529113 TCCTGGATCTTGCTCTTGACGTTGTCGATGGTGTCGGAAGACTCAACCTCGAGGGTGATA 529172
Query 139730 GTCTTGCCGGTCAACGTTTTTACGAATATTTGCATAGCT 139768
||||| || || | || || ||||| || |||||| ||
Sbjct 529173 GTCTTTCCAGTAAGGGTCTTCACGAAGATCTGCATACCT 529211
>seq609
Length=32548
Score = 102 bits (112), Expect = 8e-17
Identities = 112/149 (75%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| || || | ||| | ||| ||||||| ||||| || ||||||||||| ||||| |||
Sbjct 21019 CCACCACGAAGACGGAGAACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCACTC 20960
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| || | ||||||||| |||||||| || | || |||||||| ||||| |||||
Sbjct 20959 AAGGTACGACCGTCTTCGAGTTGTTTACCGGCGAAAATGAGACGTTGTTGATCAGGAGGG 20900
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTT 139686
|| ||||| || || ||| ||||| ||
Sbjct 20899 ATACCTTCCTTATCTTGGATCTTTTGCTT 20871
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496058772725600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |