Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017
-02-15] 843 sequences; 47,573,060 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq744 242 5e-59
seq578 150 3e-31
seq723 127 3e-24
seq657 116 5e-21
>seq744
Length=38458
Score = 242 bits (268), Expect = 5e-59
Identities = 561/843 (67%), Gaps = 3/843 (0%)
Strand=Plus/Plus
Query 49671 TTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTC 49730
||| || ||| ||||| ||||| || || || || || |||| | || || | ||
Sbjct 30544 TTGATAGTCAGAGACACGCTTTTCAAAGAAGTTGGTCTTGCCTTGAAGAGAGATCATGTC 30603
Query 49731 CATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAA 49790
||| || ||||| ||||||||| | | ||||| || | |||||| | || || |
Sbjct 30604 CATAAAGTCAAATGGATTGGTAGCCATGTAAATCTTGTCAAATCCAAGAGCAACCATGAG 30663
Query 49791 TCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTT 49850
| ||| || || ||||| || ||| ||||| || ||||||| || || ||
Sbjct 30664 ACGATCAGCAACGAATTCGATGTATTGGCACATCAAAGCAGAATTCATGCCGATGAGAGC 30723
Query 49851 AACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATAGA 49910
||| |||||||| | || | |||||| ||||||||| || || || || |||
Sbjct 30724 AACGGGAAGAGCATCCGTCAAAAATTCCTGTTCAATGCTGACAGCTTCCAAGATGATATC 30783
Query 49911 TCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAAATC 49970
| ||| ||||| || || | | | ||| |||| | | ||| || || ||
Sbjct 30784 CTTGACGCGTTCTTGGCTAGGACGCTTACGAAGATGGGTAAATAAAAGACAAGCAAAGTC 30843
Query 49971 GCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAG 50030
|| || || || || | || || | ||| ||| || || | || ||||| |
Sbjct 30844 AGTATGAAGGCCTTCATCACGACAGATCAATTCATTGCTGAATGTCAAACCAGGCATCAA 30903
Query 50031 GCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTAC 50090
||||| || || |||||||| ||||| ||||| || ||||| ||||| || ||||| ||
Sbjct 30904 ACCACGTTTCTTGAGCCAAAAAATGGAAGCAAAGGAACCAGAGAAGAAAATACCTTCGAC 30963
Query 50091 TGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCTGTCATGTATCCACTTTTGAGC 50150
|| |||||||||||||| | ||| || || || | |||||||| ||
Sbjct 30964 AGCAGCAAAGGCAACAAGACGCTCAGCAAAAGAACCGTTAGAGGAAATCCACTTGAAGGC 31023
Query 50151 CCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGttttt 50210
|||||| ||||| |||| | |||||| || || || || ||| |||||| | |||
Sbjct 31024 CCAATCAGCCTTTCTTTTGATACAAGGGATAGTGTCAATAGCAGAAAAGAGCATTTCTTT 31083
Query 50211 ttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTT 50270
|| | ||||||| | |||||| || ||||||||||| || |||| | ||||| ||
Sbjct 31084 CTCTTGGTTATCTTTGATATAAGTGTCAATCAAAAGACTGTAAGTTTCTGCGTGAATATT 31143
Query 50271 TTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTACA 50330
|||||| || ||||| || ||||||||| |||| || | ||||| ||||| |||
Sbjct 31144 TTCAATCATGATTTGAAAGCCATAGAAACATTTAGCTTCAGGAATCTTGACTTCATCACA 31203
Query 50331 AAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATAC 50390
||| || | | || |||||||| || || || || | ||||| || || || ||
Sbjct 31204 AAAGTTTTGAACCAAGTTTTCATTAACAATGCCATCTGAACCAGCAAAGAAGGCTAAGAC 31263
Query 50391 ATGTTTTATAAAATGTTTTTCG--TTGGGTGTTAGT-TTATTCCAATCATTGATATCTTT 50447
| ||||| |||| || ||| | | || | |||||||| | || ||
Sbjct 31264 GCGAGAGATAAAGAAGCGTTCGTTTTCGGTCATCTTGTTTTCCCAATCATGAAGGTCCTT 31323
Query 50448 AGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCA 50507
| ||| | |||||| |||||||||| || || || || || ||||| | | |||
Sbjct 31324 GCTCAAATCGATTTCTTCAGCTGTCCAAAAGGAAGCTTCAGCTTTCTTATAGAATTGCCA 31383
Query 50508 GAT 50510
|||
Sbjct 31384 GAT 31386
>seq578
Length=440600
Score = 150 bits (166), Expect = 3e-31
Identities = 535/823 (65%), Gaps = 16/823 (2%)
Strand=Plus/Minus
Query 79939 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATG 79997
|| || ||||| |||||||| ||| |||| || || ||| || || || | | |||
Sbjct 115923 ACACGCTTCATGAAGAGATCGGGAGTCCAGAGGGC-ATAGAAGAGGTCACGTGCTCTGAC 115865
Query 79998 CTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGG 80057
||| || || || ||||| ||| || | |||| | | || || || ||||| ||
Sbjct 115864 CTCTTCCTTACCGTGGTTCTTGCGAAGGTCCAAGAACTCAAAGATGTCGGAGTGCCAGGG 115805
Query 80058 TTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGC 80117
|||| ||| || || | | | || || || ||||| || ||||| || | |||||| ||
Sbjct 115804 CTCCAGGTAGATAGCGAAAGCACCAGGGCGCTTGTTCCCGCCCTGGTCAACGTATCTTGC 115745
Query 80118 GGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGA 80177
||||| || | |||| | ||| || | || || ||||| || || || || ||
Sbjct 115744 AGTGTTGTTGAACACTCGAAGCATAGGGACAAGCCCGTTGGAAGTTCCGTTAGTACCACC 115685
Query 80178 GATATAGCTTCCACTGGCACGAATATTACTAA--TTGATAGACCTATTCCCCCTGCCATT 80235
||| || || | ||||| ||| | |||| |||| || || || || |
Sbjct 115684 GATGTAAGAACCTGTAGCACGGATACGGTGGACGTTGA--GACCAATACCACCCGCAGTC 115627
Query 80236 TTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATC 80295
|| ||||| | || || || || || |||||||| ||||| ||||| || || ||
Sbjct 115626 TTGGAGATCATGGCACAAGTCTTCAAGGTGTCATAGATACCCTCAATGCTGTCCTCCTTC 115567
Query 80296 ATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTA 80355
|| | | || || ||| | || || | || ||| || || || || | ||
Sbjct 115566 ATATCGATAAGGAAGCAGGAGGCCAGCTGCGGCTGAGGAGTACCGGCGTTGAACAGAGTC 115507
Query 80356 GGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCT 80415
|| || ||||| || || |||| | |||| |||||||| ||||| ||| | ||
Sbjct 115506 GGCGAGGCGTGAGTGAAGTATTTCTGGGACATCAGATTGTAGGTCTCGATAACCTTCTCG 115447
Query 80416 ATATCC-CATTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAAC 80474
| || || | || ||||| ||||| |||||||| | |||||||||||| | ||| |
Sbjct 115446 AGGTCATCACCG-TGGATTCCGACCGCAACACGCATAATCATGTGCTGAGGACGCTCAGC 115388
Query 80475 GATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTT 80534
| ||| ||| || | || || ||| ||||| ||| || || || || || |
Sbjct 115387 AACCTTTCCATTGATGCGGAGCAGATACGATCGTTCCAGAGTCTTGAATCCGAAGTATTG 115328
Query 80535 GTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTA 80592
||| ||||| || || || |||| |||| | ||||| | || |||| || || ||
Sbjct 115327 GTAGTTGAAA--TCACGGTCATAAACAATAGCGGAGTTCAATTCATCCGCATGCTTCATA 115270
Query 80593 ACTACATCCATGGTGATACTT--GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAA 80650
| | | ||| | | ||| || || ||||| | | || ||| || || || |
Sbjct 115269 A-TGATTTCAT-ACGTTTCTTTCGATATCATCGGCGCCGGCTTATTATTCTTCGGGTTGA 115212
Query 80651 CATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGAT 80710
|||||| | | | |||| || || | || | || || || | |||||| || |
Sbjct 115211 CATAGTGGTAAAGGTCCTGGATGACCAGAGAGAACTGCTTCTTGGTCTGCTTGTGGAGGT 115152
Query 80711 TTGATACGGCTATTCTGGCGGCTAAAATGGCATAATCTGGATG 80753
| || |||||||| | || || | || ||||| ||||| ||
Sbjct 115151 TGGACACGGCTATACGCGCAGCGAGGATAGCATAGTCTGGGTG 115109
>seq723
Length=18298
Score = 127 bits (140), Expect = 3e-24
Identities = 458/715 (64%), Gaps = 5/715 (1%)
Strand=Plus/Plus
Query 78756 ATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTT 78815
||||||||| || || |||| || |||| | || || |||||| || | |||
Sbjct 4430 ATAGTACATGCCAGTCTTTAATCCCTTCTTCCAGGCATAAAAGTGCATAGAGGTCAATTT 4489
Query 78816 GGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCC 78875
| | | | || || || || | ||||||||||||| ||| ||||| || |||||
Sbjct 4490 GCCAAAGTTTGGTTCGGCAGTAAACAAATTCATAGATTGAGATTGGTCGATAAAAGCTCC 4549
Query 78876 CCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAAC 78935
|| || || ||||| | || || || |||||| ||| ||||| | ||||| || |
Sbjct 4550 TCTATCAGCGGCCATGTCAATAATAGTTCTTTGTGAAATCTCCCATACTGTTTTGTATAG 4609
Query 78936 TCGCTTAATATCTTCTGGAAGGTTTGTATTCTGAATGGAT----CCACCATCTGCCATAA 78991
|| | ||| || |||| | | | | | ||||| || |||| || || |
Sbjct 4610 CTTTTTGAGATCATCAGGAACGCCGGGAATACG-TTGGATACTACCGCCATGAGCAATCA 4668
Query 78992 TCCTATTCTTGATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCG 79051
|| | |||||||| | ||||||||||| | ||| | | | | | | ||||
Sbjct 4669 TCATGTTCTTGATGTTATCATTCCATAAATCGAGCTCAATGAGGTCATTCAATAAATGCT 4728
Query 79052 GATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATG 79111
| || |||| ||| ||||| ||| || | || || |||||||| || || || |
Sbjct 4729 GGTTGACTATTTGGAATTCACCACTTTGAACACGACGCGTATAAATATTGCTAGTGTAAG 4788
Query 79112 GTTCCACCGATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCA 79171
| || | |||| ||||| ||||| |||||| ||| || || |||||||| || |
Sbjct 4789 GCTCGAAGCATTCGTTATTGCCCAATATTTGACTAGTGCTAGCAGTAGGCATAGGAGCAA 4848
Query 79172 CCAATAAACTATTTCTAAGACCGTATGATCTGATTTTATCTTTTAGAGATTCCCAATCCC 79231
| | | | || | | ||| ||| |||| || || | | || | ||||||
Sbjct 4849 CAAGAAGAGAGTTACGGACACCATATTTCTTGATATTGGCTCTCAAAGTATTCCAATCGA 4908
Query 79232 AAAGATCAGACGGGACAACATTCCAAAGATCATATTGTAGAATACCGTTACTAGCGTATG 79291
| | || || |||||||| | ||| | ||| |||||||| | ||| | ||
Sbjct 4909 GATGTTCCGAGCCTTTGACATTCCATAAATCGTGTTGAAGAATACCTTGACTTACAGGTG 4968
Query 79292 ATCCTGTGTATGTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATG 79351
| ||| ||| || ||||| ||||| | | || || | ||||| |||||||| |
Sbjct 4969 AGCCTTCGTAGGTCTCATAGGGTCCCTGTTCTTTCGCAAGCTCACACGAAGCCTCTAAAG 5028
Query 79352 CTCCGTAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAA 79411
| | ||||||| |||||||||| | | || | | ||||| | |||||
Sbjct 5029 CAGCAAAATAAATTCTTTCGAAAATATCTCTGTTCAATTGAGCAGCTTCAGGAGAATCAA 5088
Query 79412 ATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGAT 79466
| |||||| | | ||||| || || || | |||||||| || | ||||||
Sbjct 5089 ACGGATAACGCATCAAGATAAATGCATCAGCAAGCCCTTGAACGCCGAGACCGAT 5143
>seq657
Length=446211
Score = 116 bits (128), Expect = 5e-21
Identities = 159/219 (73%), Gaps = 5/219 (2%)
Strand=Plus/Plus
Query 49951 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 50010
|||| || ||| ||||| ||| |||||||||||| || | | || || ||||| ||
Sbjct 212063 AACAGCAGACAAGCGAAGTCGGTGTGCAGACCCTCATCACGAGAGATCAGCTCGTTAGAG 212122
Query 50011 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCA 50070
|| || || || ||||| ||||||||||| || ||||| || || || || || || |||
Sbjct 212123 AAGGTCAGACCAGGCATGAGGCCACGCTTCTTCAGCCAGAAGATAGAGGCGAAAGAGCCA 212182
Query 50071 GAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG---CG 50127
|| |||||||| || || || || || |||||||| | | || | || ||| |
Sbjct 212183 GAGAAGAAGATACCCTCAACAGCAGCGAAGGCAACCAAGCGCTGGGCGAAAGTGGACTCC 212242
Query 50128 CTGTCATGTATCCA-CTTTTGAGCCCAATCGGCCTTCTT 50165
|||| || ||||| | || ||||| |||||||||||
Sbjct 212243 TTGTCCTGGATCCAGCGAATG-GCCCAGTCGGCCTTCTT 212280
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718261231242520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |