Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017 -02-15] 843 sequences; 47,573,060 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq744 242 5e-59 seq578 150 3e-31 seq723 127 3e-24 seq657 116 5e-21 >seq744 Length=38458 Score = 242 bits (268), Expect = 5e-59 Identities = 561/843 (67%), Gaps = 3/843 (0%) Strand=Plus/Plus Query 49671 TTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTC 49730 ||| || ||| ||||| ||||| || || || || || |||| | || || | || Sbjct 30544 TTGATAGTCAGAGACACGCTTTTCAAAGAAGTTGGTCTTGCCTTGAAGAGAGATCATGTC 30603 Query 49731 CATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAA 49790 ||| || ||||| ||||||||| | | ||||| || | |||||| | || || | Sbjct 30604 CATAAAGTCAAATGGATTGGTAGCCATGTAAATCTTGTCAAATCCAAGAGCAACCATGAG 30663 Query 49791 TCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTT 49850 | ||| || || ||||| || ||| ||||| || ||||||| || || || Sbjct 30664 ACGATCAGCAACGAATTCGATGTATTGGCACATCAAAGCAGAATTCATGCCGATGAGAGC 30723 Query 49851 AACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATAGA 49910 ||| |||||||| | || | |||||| ||||||||| || || || || ||| Sbjct 30724 AACGGGAAGAGCATCCGTCAAAAATTCCTGTTCAATGCTGACAGCTTCCAAGATGATATC 30783 Query 49911 TCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAAATC 49970 | ||| ||||| || || | | | ||| |||| | | ||| || || || Sbjct 30784 CTTGACGCGTTCTTGGCTAGGACGCTTACGAAGATGGGTAAATAAAAGACAAGCAAAGTC 30843 Query 49971 GCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAG 50030 || || || || || | || || | ||| ||| || || | || ||||| | Sbjct 30844 AGTATGAAGGCCTTCATCACGACAGATCAATTCATTGCTGAATGTCAAACCAGGCATCAA 30903 Query 50031 GCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTAC 50090 ||||| || || |||||||| ||||| ||||| || ||||| ||||| || ||||| || Sbjct 30904 ACCACGTTTCTTGAGCCAAAAAATGGAAGCAAAGGAACCAGAGAAGAAAATACCTTCGAC 30963 Query 50091 TGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCTGTCATGTATCCACTTTTGAGC 50150 || |||||||||||||| | ||| || || || | |||||||| || Sbjct 30964 AGCAGCAAAGGCAACAAGACGCTCAGCAAAAGAACCGTTAGAGGAAATCCACTTGAAGGC 31023 Query 50151 CCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGttttt 50210 |||||| ||||| |||| | |||||| || || || || ||| |||||| | ||| Sbjct 31024 CCAATCAGCCTTTCTTTTGATACAAGGGATAGTGTCAATAGCAGAAAAGAGCATTTCTTT 31083 Query 50211 ttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTT 50270 || | ||||||| | |||||| || ||||||||||| || |||| | ||||| || Sbjct 31084 CTCTTGGTTATCTTTGATATAAGTGTCAATCAAAAGACTGTAAGTTTCTGCGTGAATATT 31143 Query 50271 TTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTACA 50330 |||||| || ||||| || ||||||||| |||| || | ||||| ||||| ||| Sbjct 31144 TTCAATCATGATTTGAAAGCCATAGAAACATTTAGCTTCAGGAATCTTGACTTCATCACA 31203 Query 50331 AAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATAC 50390 ||| || | | || |||||||| || || || || | ||||| || || || || Sbjct 31204 AAAGTTTTGAACCAAGTTTTCATTAACAATGCCATCTGAACCAGCAAAGAAGGCTAAGAC 31263 Query 50391 ATGTTTTATAAAATGTTTTTCG--TTGGGTGTTAGT-TTATTCCAATCATTGATATCTTT 50447 | ||||| |||| || ||| | | || | |||||||| | || || Sbjct 31264 GCGAGAGATAAAGAAGCGTTCGTTTTCGGTCATCTTGTTTTCCCAATCATGAAGGTCCTT 31323 Query 50448 AGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCA 50507 | ||| | |||||| |||||||||| || || || || || ||||| | | ||| Sbjct 31324 GCTCAAATCGATTTCTTCAGCTGTCCAAAAGGAAGCTTCAGCTTTCTTATAGAATTGCCA 31383 Query 50508 GAT 50510 ||| Sbjct 31384 GAT 31386 >seq578 Length=440600 Score = 150 bits (166), Expect = 3e-31 Identities = 535/823 (65%), Gaps = 16/823 (2%) Strand=Plus/Minus Query 79939 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATG 79997 || || ||||| |||||||| ||| |||| || || ||| || || || | | ||| Sbjct 115923 ACACGCTTCATGAAGAGATCGGGAGTCCAGAGGGC-ATAGAAGAGGTCACGTGCTCTGAC 115865 Query 79998 CTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGG 80057 ||| || || || ||||| ||| || | |||| | | || || || ||||| || Sbjct 115864 CTCTTCCTTACCGTGGTTCTTGCGAAGGTCCAAGAACTCAAAGATGTCGGAGTGCCAGGG 115805 Query 80058 TTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGC 80117 |||| ||| || || | | | || || || ||||| || ||||| || | |||||| || Sbjct 115804 CTCCAGGTAGATAGCGAAAGCACCAGGGCGCTTGTTCCCGCCCTGGTCAACGTATCTTGC 115745 Query 80118 GGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGA 80177 ||||| || | |||| | ||| || | || || ||||| || || || || || Sbjct 115744 AGTGTTGTTGAACACTCGAAGCATAGGGACAAGCCCGTTGGAAGTTCCGTTAGTACCACC 115685 Query 80178 GATATAGCTTCCACTGGCACGAATATTACTAA--TTGATAGACCTATTCCCCCTGCCATT 80235 ||| || || | ||||| ||| | |||| |||| || || || || | Sbjct 115684 GATGTAAGAACCTGTAGCACGGATACGGTGGACGTTGA--GACCAATACCACCCGCAGTC 115627 Query 80236 TTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATC 80295 || ||||| | || || || || || |||||||| ||||| ||||| || || || Sbjct 115626 TTGGAGATCATGGCACAAGTCTTCAAGGTGTCATAGATACCCTCAATGCTGTCCTCCTTC 115567 Query 80296 ATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTA 80355 || | | || || ||| | || || | || ||| || || || || | || Sbjct 115566 ATATCGATAAGGAAGCAGGAGGCCAGCTGCGGCTGAGGAGTACCGGCGTTGAACAGAGTC 115507 Query 80356 GGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCT 80415 || || ||||| || || |||| | |||| |||||||| ||||| ||| | || Sbjct 115506 GGCGAGGCGTGAGTGAAGTATTTCTGGGACATCAGATTGTAGGTCTCGATAACCTTCTCG 115447 Query 80416 ATATCC-CATTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAAC 80474 | || || | || ||||| ||||| |||||||| | |||||||||||| | ||| | Sbjct 115446 AGGTCATCACCG-TGGATTCCGACCGCAACACGCATAATCATGTGCTGAGGACGCTCAGC 115388 Query 80475 GATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTT 80534 | ||| ||| || | || || ||| ||||| ||| || || || || || | Sbjct 115387 AACCTTTCCATTGATGCGGAGCAGATACGATCGTTCCAGAGTCTTGAATCCGAAGTATTG 115328 Query 80535 GTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTA 80592 ||| ||||| || || || |||| |||| | ||||| | || |||| || || || Sbjct 115327 GTAGTTGAAA--TCACGGTCATAAACAATAGCGGAGTTCAATTCATCCGCATGCTTCATA 115270 Query 80593 ACTACATCCATGGTGATACTT--GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAA 80650 | | | ||| | | ||| || || ||||| | | || ||| || || || | Sbjct 115269 A-TGATTTCAT-ACGTTTCTTTCGATATCATCGGCGCCGGCTTATTATTCTTCGGGTTGA 115212 Query 80651 CATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGAT 80710 |||||| | | | |||| || || | || | || || || | |||||| || | Sbjct 115211 CATAGTGGTAAAGGTCCTGGATGACCAGAGAGAACTGCTTCTTGGTCTGCTTGTGGAGGT 115152 Query 80711 TTGATACGGCTATTCTGGCGGCTAAAATGGCATAATCTGGATG 80753 | || |||||||| | || || | || ||||| ||||| || Sbjct 115151 TGGACACGGCTATACGCGCAGCGAGGATAGCATAGTCTGGGTG 115109 >seq723 Length=18298 Score = 127 bits (140), Expect = 3e-24 Identities = 458/715 (64%), Gaps = 5/715 (1%) Strand=Plus/Plus Query 78756 ATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTT 78815 ||||||||| || || |||| || |||| | || || |||||| || | ||| Sbjct 4430 ATAGTACATGCCAGTCTTTAATCCCTTCTTCCAGGCATAAAAGTGCATAGAGGTCAATTT 4489 Query 78816 GGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCC 78875 | | | | || || || || | ||||||||||||| ||| ||||| || ||||| Sbjct 4490 GCCAAAGTTTGGTTCGGCAGTAAACAAATTCATAGATTGAGATTGGTCGATAAAAGCTCC 4549 Query 78876 CCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAAC 78935 || || || ||||| | || || || |||||| ||| ||||| | ||||| || | Sbjct 4550 TCTATCAGCGGCCATGTCAATAATAGTTCTTTGTGAAATCTCCCATACTGTTTTGTATAG 4609 Query 78936 TCGCTTAATATCTTCTGGAAGGTTTGTATTCTGAATGGAT----CCACCATCTGCCATAA 78991 || | ||| || |||| | | | | | ||||| || |||| || || | Sbjct 4610 CTTTTTGAGATCATCAGGAACGCCGGGAATACG-TTGGATACTACCGCCATGAGCAATCA 4668 Query 78992 TCCTATTCTTGATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCG 79051 || | |||||||| | ||||||||||| | ||| | | | | | | |||| Sbjct 4669 TCATGTTCTTGATGTTATCATTCCATAAATCGAGCTCAATGAGGTCATTCAATAAATGCT 4728 Query 79052 GATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATG 79111 | || |||| ||| ||||| ||| || | || || |||||||| || || || | Sbjct 4729 GGTTGACTATTTGGAATTCACCACTTTGAACACGACGCGTATAAATATTGCTAGTGTAAG 4788 Query 79112 GTTCCACCGATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCA 79171 | || | |||| ||||| ||||| |||||| ||| || || |||||||| || | Sbjct 4789 GCTCGAAGCATTCGTTATTGCCCAATATTTGACTAGTGCTAGCAGTAGGCATAGGAGCAA 4848 Query 79172 CCAATAAACTATTTCTAAGACCGTATGATCTGATTTTATCTTTTAGAGATTCCCAATCCC 79231 | | | | || | | ||| ||| |||| || || | | || | |||||| Sbjct 4849 CAAGAAGAGAGTTACGGACACCATATTTCTTGATATTGGCTCTCAAAGTATTCCAATCGA 4908 Query 79232 AAAGATCAGACGGGACAACATTCCAAAGATCATATTGTAGAATACCGTTACTAGCGTATG 79291 | | || || |||||||| | ||| | ||| |||||||| | ||| | || Sbjct 4909 GATGTTCCGAGCCTTTGACATTCCATAAATCGTGTTGAAGAATACCTTGACTTACAGGTG 4968 Query 79292 ATCCTGTGTATGTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATG 79351 | ||| ||| || ||||| ||||| | | || || | ||||| |||||||| | Sbjct 4969 AGCCTTCGTAGGTCTCATAGGGTCCCTGTTCTTTCGCAAGCTCACACGAAGCCTCTAAAG 5028 Query 79352 CTCCGTAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAA 79411 | | ||||||| |||||||||| | | || | | ||||| | ||||| Sbjct 5029 CAGCAAAATAAATTCTTTCGAAAATATCTCTGTTCAATTGAGCAGCTTCAGGAGAATCAA 5088 Query 79412 ATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGAT 79466 | |||||| | | ||||| || || || | |||||||| || | |||||| Sbjct 5089 ACGGATAACGCATCAAGATAAATGCATCAGCAAGCCCTTGAACGCCGAGACCGAT 5143 >seq657 Length=446211 Score = 116 bits (128), Expect = 5e-21 Identities = 159/219 (73%), Gaps = 5/219 (2%) Strand=Plus/Plus Query 49951 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 50010 |||| || ||| ||||| ||| |||||||||||| || | | || || ||||| || Sbjct 212063 AACAGCAGACAAGCGAAGTCGGTGTGCAGACCCTCATCACGAGAGATCAGCTCGTTAGAG 212122 Query 50011 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCA 50070 || || || || ||||| ||||||||||| || ||||| || || || || || || ||| Sbjct 212123 AAGGTCAGACCAGGCATGAGGCCACGCTTCTTCAGCCAGAAGATAGAGGCGAAAGAGCCA 212182 Query 50071 GAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG---CG 50127 || |||||||| || || || || || |||||||| | | || | || ||| | Sbjct 212183 GAGAAGAAGATACCCTCAACAGCAGCGAAGGCAACCAAGCGCTGGGCGAAAGTGGACTCC 212242 Query 50128 CTGTCATGTATCCA-CTTTTGAGCCCAATCGGCCTTCTT 50165 |||| || ||||| | || ||||| ||||||||||| Sbjct 212243 TTGTCCTGGATCCAGCGAATG-GCCCAGTCGGCCTTCTT 212280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718261231242520