Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017
-02-15] 843 sequences; 47,573,060 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq657 168 1e-36
seq744 150 3e-31
seq578 113 7e-20
>seq657
Length=446211
Score = 168 bits (186), Expect = 1e-36
Identities = 341/503 (68%), Gaps = 25/503 (5%)
Strand=Plus/Minus
Query 125361 ATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCC 125420
|| || || ||||| | |||| ||||| |||||| | ||| | |||| | | ||||
Sbjct 212286 ATCCGCAAGAAGGCCGACTGGGCCATTCGCTGGATCCAGGACAAGGAGTCCACTTTCGCC 212227
Query 125421 GACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCC 125480
| | |||| || ||||| || || ||||| |||||||| || || ||| || |
Sbjct 212226 CAGCGCTTGGTTGCCTTCGCTGCTGTTGAGGGTATCTTCTTCTCTGGCTCTTTCGCCTCT 212167
Query 125481 ATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATA 125540
||||| ||||| |||||||| || |||||||| || ||||| | ||||||| | ||
Sbjct 212166 ATCTTCTGGCTGAAGAAGCGTGGCCTCATGCCTGGTCTGACCTTCTCTAACGAGCTGATC 212107
Query 125541 TCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACT----ATC 125595
||||| || ||||| || ||| ||||| || ||| ||||| || || || | |
Sbjct 212106 TCTCGTGATGAGGGTCTGCACACCGACTTCGCTTGTCTGCTGTTCTCCCACCTGAACAAC 212047
Query 125596 TGCGTCCCGAGTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGA 125655
|| | | || | | | || ||| ||||| ||| |||||||
Sbjct 212046 CGCCCCTCACCTGAGGTT-----GTCGAGAAGATCATCG---TTG------ATGCCGTCG 212001
Query 125656 GGATAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCA 125715
|| || || ||||| || || || |||| || || | | |||| ||||||| ||
Sbjct 212000 ACATTGAGCAGGAGTTCCTGACGGACGCCCTCCCCGTTGCCCTCCTTGGTATGAACTCCA 211941
Query 125716 AGCTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGCC 125775
|||| |||||| ||||||| ||||| || || || || || ||| | | |||||
Sbjct 211940 AGCTCATGTGCCAGTACATCGAGTTCGTTGCCGACCGCCTGCTGGTC---TCTCTTGGCA 211884
Query 125776 GCAAGATTTAC---AACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGG 125832
||||| ||| ||||||| || ||||| || |||||| || ||| || || | |
Sbjct 211883 ACAAGAAGTACTACAACGCCACAAACCCCTTCGACTTCATGGACAACATCTCGCTCGCTG 211824
Query 125833 GTAAGACCAACTTTTTCGAGAAG 125855
| ||||||||||| |||||||||
Sbjct 211823 GCAAGACCAACTTCTTCGAGAAG 211801
Score = 118 bits (130), Expect = 2e-21
Identities = 205/291 (70%), Gaps = 8/291 (3%)
Strand=Plus/Minus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|| ||| | |||||||| ||||| |||| ||||| ||||| | || ||| ||||||||
Sbjct 212687 ATCTGGCAGATGTACAAGAAGGCAGAGGCTTCCTTCTGGACTGCTGAGGAGATCGATCTG 212628
Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138
|||||||||||| |||| ||| | | || | | | ||||| | || || ||
Sbjct 212627 TCCAAGGACCTGCACGACTGGAACAACCGCCTCAACAATGACGAGCGCTACTTCATCTCC 212568
Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACG 125197
|| | |||| ||||| |||| || || || ||||||||||| || || || || ||
Sbjct 212567 CATGTCCTGGCTTTCTTCGCCGCGTCTGACGGCATCGTCAACGAGAACCTCGTCGA-GCG 212509
Query 125198 ATTCTCTCAAGAGTTGACCA--TTCCAGAGGTGTCG-TGCTTTTACGGATTCCAAATCAT 125254
||| | ||| | ||| | || |||| ||| ||||| ||||| ||||| |||||
Sbjct 212508 TTTCAGTGGCGAG--GTCCAGGTCCCTGAGG-CTCGTTGCTTCTACGGTTTCCAGATCAT 212452
Query 125255 GATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACAT 125305
||| |||||| | ||||| || | ||||| || || |||| |||||
Sbjct 212451 GATGGAGAACATCCACTCCGAGACATACTCCCTTCTCATCGACACCTACAT 212401
>seq744
Length=38458
Score = 150 bits (166), Expect = 3e-31
Identities = 543/842 (64%), Gaps = 22/842 (3%)
Strand=Plus/Minus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|| ||| || | || || || ||| | || ||||||||||| | ||||| ||||| ||
Sbjct 31386 ATCTGGCAATTCTATAAGAAAGCTGAAGCTTCCTTTTGGACAGCTGAAGAAATCGATTTG 31327
Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138
||||||||| | |||||||| | |||| |||| || || ||||| ||
Sbjct 31326 AGCAAGGACCTTCATGATTGGGAAAACAAGATGACCGAAAACGAACGCTTCTTTATCTCT 31267
Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGA 125198
| | | || ||||||||||| || || ||||| || || || || || || | |
Sbjct 31266 CGCGTCTTAGCCTTCTTTGCTGGTTCAGATGGCATTGTTAATGAAAACTTGGTTCAAAAC 31207
Query 125199 TTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGATT 125258
|| | | | || | | ||||| || | || || || || || ||||||||||||
Sbjct 31206 TTTTGTGATGAAGTCAAGATTCCTGAAGCTAAATGTTTCTATGGCTTTCAAATCATGATT 31147
Query 125259 GAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCCGCAA 125318
|| || | ||| | |||| ||| | ||||||||| || || ||| |||
Sbjct 31146 GAAAATATTCACGCAGAAACTTACAGTCTTTTGATTGACACTTATATCAAAGATAACCAA 31087
Query 125319 CGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGGCTCAA 125378
||| | ||||||||| || || ||||| | || | ||| | ||||||| |
Sbjct 31086 GAGAAAGAAATGCTCTTTTCTGCTATTGACACTATCCCTTGTATCAAAAGAAAGGCTGAT 31027
Query 125379 TGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGCATTC 125438
|||| | |||||| | | || ||| | || || | || || || ||
Sbjct 31026 TGGGCCTTCAAGTGGAT---TTCCTCTAACGGTTCTTTTGCTGAGCGTCTTGTTGCCTTT 30970
Query 125439 GCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAGAAG 125498
|| || || || || || ||||| || ||| ||||| |||| ||||||||||||||
Sbjct 30969 GCTGCTGTCGAAGGTATTTTCTTCTCTGGTTCCTTTGCTTCCATTTTTTGGCTCAAGAAA 30910
Query 125499 CGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGGCCTA 125558
|| || | ||||| || |||| ||| || || || || | ||| || || |||||
Sbjct 30909 CGTGGTTTGATGCCTGGTTTGACATTCAGCAATGAATTGATCTGTCGTGATGAAGGCCTT 30850
Query 125559 CACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCTGCGTCCCGAGTGCAGATCC-AG 125617
|| ||||||||| ||| | ||| | | |||| ||| || | ||| ||
Sbjct 30849 CATACTGACTTTGCTTGTCTTTTATTT---ACCCATCTTCGT---AAGCG----TCCTAG 30800
Query 125618 CGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAGAGTTTCTAAC 125677
| | ||| |||| | || | || || || || || ||||| || ||| | ||
Sbjct 30799 CCAAGAACGCGTCAAGGATATCATCTTGGAAGCTGTCAGCATTGAACAGGAATTTTTGAC 30740
Query 125678 CGAATCCCTACCGGTCAGCATGATTGGCATGAA--CTGCAAGCTAATGTGCGAGTACATA 125735
|| | || || || | || |||||||| |||| | |||||| | |||||
Sbjct 30739 GGATGCTCTTCCCGTTGCTCTCATCGGCATGAATTCTGC--TTTGATGTGCCAATACATC 30682
Query 125736 GAGTTTGTGGCAGATCGTCTACTG--TACGAGTTGATTGGCCGCAAGATTTACAACGCCA 125793
|| || || || |||||||| || | | | |||| | ||||||||||| || |
Sbjct 30681 GAATTCGTTGCTGATCGTCTCATGGTTGCTCTTGGATTTG--ACAAGATTTACATGGCTA 30624
Query 125794 AGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTTTTTCGAGA 125853
||||| ||||| || ||| || || || || | || ||||||||||| || || |
Sbjct 30623 CCAATCCATTTGACTTTATGGACATGATCTCTCTTCAAGGCAAGACCAACTTCTTTGAAA 30564
Query 125854 AG 125855
||
Sbjct 30563 AG 30562
>seq578
Length=440600
Score = 113 bits (124), Expect = 7e-20
Identities = 218/318 (69%), Gaps = 8/318 (3%)
Strand=Plus/Plus
Query 96807 ACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATG-CAATGTCACG 96865
|| ||||| | ||| || || || || ||||| || ||| ||| || || || |
Sbjct 115691 ACTAACGGAACTTCCAACGGGCTTGTCCCTATGCTTCGAGTGTTCAACAACACTG-CAAG 115749
Query 96866 ATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTG 96925
||||||| |||||||| || || || || || ||| | || ||||| |||| || ||
Sbjct 115750 ATACGTTGACCAGGGCGGGAACAAGCGCCCTGGTGCTTTCGCTATCTACCTGGAGCCCTG 115809
Query 96926 GCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACG 96985
|||| | ||| | ||||| || | || | ||||| ||| || ||||||| |
Sbjct 115810 GCACTCCGACATCTTTGAGTTCTTGGACCTTCGCAAGAACCACGGTAAGGAAGAGGTCAG 115869
Query 96986 AGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAA--- 97042
||| | ||| | || ||||| |||||| || ||| | ||||||||||| || |
Sbjct 115870 AGCACGTGACCTCTTCTATGCCCTCTGGACTCCCGATCTCTTCATGAAGCGTGTTGAGTC 115929
Query 97043 CGACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTG 97102
|||||| |||||| |||| | ||||| | | | |||||||| || ||| ||
Sbjct 115930 TAACGGTG---ACTGGACCCTATTCTGCCCAAATGAGGCTCCCGGTCTTTCTGATGTCTA 115986
Query 97103 GGGCGAAGAGTTTGAGGC 97120
||||| |||||||||||
Sbjct 115987 TGGCGATGAGTTTGAGGC 116004
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741051391088680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |