Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017 -02-15] 843 sequences; 47,573,060 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq657 168 1e-36 seq744 150 3e-31 seq578 113 7e-20 >seq657 Length=446211 Score = 168 bits (186), Expect = 1e-36 Identities = 341/503 (68%), Gaps = 25/503 (5%) Strand=Plus/Minus Query 125361 ATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCC 125420 || || || ||||| | |||| ||||| |||||| | ||| | |||| | | |||| Sbjct 212286 ATCCGCAAGAAGGCCGACTGGGCCATTCGCTGGATCCAGGACAAGGAGTCCACTTTCGCC 212227 Query 125421 GACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCC 125480 | | |||| || ||||| || || ||||| |||||||| || || ||| || | Sbjct 212226 CAGCGCTTGGTTGCCTTCGCTGCTGTTGAGGGTATCTTCTTCTCTGGCTCTTTCGCCTCT 212167 Query 125481 ATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATA 125540 ||||| ||||| |||||||| || |||||||| || ||||| | ||||||| | || Sbjct 212166 ATCTTCTGGCTGAAGAAGCGTGGCCTCATGCCTGGTCTGACCTTCTCTAACGAGCTGATC 212107 Query 125541 TCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACT----ATC 125595 ||||| || ||||| || ||| ||||| || ||| ||||| || || || | | Sbjct 212106 TCTCGTGATGAGGGTCTGCACACCGACTTCGCTTGTCTGCTGTTCTCCCACCTGAACAAC 212047 Query 125596 TGCGTCCCGAGTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGA 125655 || | | || | | | || ||| ||||| ||| ||||||| Sbjct 212046 CGCCCCTCACCTGAGGTT-----GTCGAGAAGATCATCG---TTG------ATGCCGTCG 212001 Query 125656 GGATAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCA 125715 || || || ||||| || || || |||| || || | | |||| ||||||| || Sbjct 212000 ACATTGAGCAGGAGTTCCTGACGGACGCCCTCCCCGTTGCCCTCCTTGGTATGAACTCCA 211941 Query 125716 AGCTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGCC 125775 |||| |||||| ||||||| ||||| || || || || || ||| | | ||||| Sbjct 211940 AGCTCATGTGCCAGTACATCGAGTTCGTTGCCGACCGCCTGCTGGTC---TCTCTTGGCA 211884 Query 125776 GCAAGATTTAC---AACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGG 125832 ||||| ||| ||||||| || ||||| || |||||| || ||| || || | | Sbjct 211883 ACAAGAAGTACTACAACGCCACAAACCCCTTCGACTTCATGGACAACATCTCGCTCGCTG 211824 Query 125833 GTAAGACCAACTTTTTCGAGAAG 125855 | ||||||||||| ||||||||| Sbjct 211823 GCAAGACCAACTTCTTCGAGAAG 211801 Score = 118 bits (130), Expect = 2e-21 Identities = 205/291 (70%), Gaps = 8/291 (3%) Strand=Plus/Minus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| | |||||||| ||||| |||| ||||| ||||| | || ||| |||||||| Sbjct 212687 ATCTGGCAGATGTACAAGAAGGCAGAGGCTTCCTTCTGGACTGCTGAGGAGATCGATCTG 212628 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 |||||||||||| |||| ||| | | || | | | ||||| | || || || Sbjct 212627 TCCAAGGACCTGCACGACTGGAACAACCGCCTCAACAATGACGAGCGCTACTTCATCTCC 212568 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACG 125197 || | |||| ||||| |||| || || || ||||||||||| || || || || || Sbjct 212567 CATGTCCTGGCTTTCTTCGCCGCGTCTGACGGCATCGTCAACGAGAACCTCGTCGA-GCG 212509 Query 125198 ATTCTCTCAAGAGTTGACCA--TTCCAGAGGTGTCG-TGCTTTTACGGATTCCAAATCAT 125254 ||| | ||| | ||| | || |||| ||| ||||| ||||| ||||| ||||| Sbjct 212508 TTTCAGTGGCGAG--GTCCAGGTCCCTGAGG-CTCGTTGCTTCTACGGTTTCCAGATCAT 212452 Query 125255 GATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACAT 125305 ||| |||||| | ||||| || | ||||| || || |||| ||||| Sbjct 212451 GATGGAGAACATCCACTCCGAGACATACTCCCTTCTCATCGACACCTACAT 212401 >seq744 Length=38458 Score = 150 bits (166), Expect = 3e-31 Identities = 543/842 (64%), Gaps = 22/842 (3%) Strand=Plus/Minus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| || | || || || ||| | || ||||||||||| | ||||| ||||| || Sbjct 31386 ATCTGGCAATTCTATAAGAAAGCTGAAGCTTCCTTTTGGACAGCTGAAGAAATCGATTTG 31327 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 ||||||||| | |||||||| | |||| |||| || || ||||| || Sbjct 31326 AGCAAGGACCTTCATGATTGGGAAAACAAGATGACCGAAAACGAACGCTTCTTTATCTCT 31267 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGA 125198 | | | || ||||||||||| || || ||||| || || || || || || | | Sbjct 31266 CGCGTCTTAGCCTTCTTTGCTGGTTCAGATGGCATTGTTAATGAAAACTTGGTTCAAAAC 31207 Query 125199 TTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGATT 125258 || | | | || | | ||||| || | || || || || || |||||||||||| Sbjct 31206 TTTTGTGATGAAGTCAAGATTCCTGAAGCTAAATGTTTCTATGGCTTTCAAATCATGATT 31147 Query 125259 GAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCCGCAA 125318 || || | ||| | |||| ||| | ||||||||| || || ||| ||| Sbjct 31146 GAAAATATTCACGCAGAAACTTACAGTCTTTTGATTGACACTTATATCAAAGATAACCAA 31087 Query 125319 CGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGGCTCAA 125378 ||| | ||||||||| || || ||||| | || | ||| | ||||||| | Sbjct 31086 GAGAAAGAAATGCTCTTTTCTGCTATTGACACTATCCCTTGTATCAAAAGAAAGGCTGAT 31027 Query 125379 TGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGCATTC 125438 |||| | |||||| | | || ||| | || || | || || || || Sbjct 31026 TGGGCCTTCAAGTGGAT---TTCCTCTAACGGTTCTTTTGCTGAGCGTCTTGTTGCCTTT 30970 Query 125439 GCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAGAAG 125498 || || || || || || ||||| || ||| ||||| |||| |||||||||||||| Sbjct 30969 GCTGCTGTCGAAGGTATTTTCTTCTCTGGTTCCTTTGCTTCCATTTTTTGGCTCAAGAAA 30910 Query 125499 CGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGGCCTA 125558 || || | ||||| || |||| ||| || || || || | ||| || || ||||| Sbjct 30909 CGTGGTTTGATGCCTGGTTTGACATTCAGCAATGAATTGATCTGTCGTGATGAAGGCCTT 30850 Query 125559 CACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCTGCGTCCCGAGTGCAGATCC-AG 125617 || ||||||||| ||| | ||| | | |||| ||| || | ||| || Sbjct 30849 CATACTGACTTTGCTTGTCTTTTATTT---ACCCATCTTCGT---AAGCG----TCCTAG 30800 Query 125618 CGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAGAGTTTCTAAC 125677 | | ||| |||| | || | || || || || || ||||| || ||| | || Sbjct 30799 CCAAGAACGCGTCAAGGATATCATCTTGGAAGCTGTCAGCATTGAACAGGAATTTTTGAC 30740 Query 125678 CGAATCCCTACCGGTCAGCATGATTGGCATGAA--CTGCAAGCTAATGTGCGAGTACATA 125735 || | || || || | || |||||||| |||| | |||||| | ||||| Sbjct 30739 GGATGCTCTTCCCGTTGCTCTCATCGGCATGAATTCTGC--TTTGATGTGCCAATACATC 30682 Query 125736 GAGTTTGTGGCAGATCGTCTACTG--TACGAGTTGATTGGCCGCAAGATTTACAACGCCA 125793 || || || || |||||||| || | | | |||| | ||||||||||| || | Sbjct 30681 GAATTCGTTGCTGATCGTCTCATGGTTGCTCTTGGATTTG--ACAAGATTTACATGGCTA 30624 Query 125794 AGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTTTTTCGAGA 125853 ||||| ||||| || ||| || || || || | || ||||||||||| || || | Sbjct 30623 CCAATCCATTTGACTTTATGGACATGATCTCTCTTCAAGGCAAGACCAACTTCTTTGAAA 30564 Query 125854 AG 125855 || Sbjct 30563 AG 30562 >seq578 Length=440600 Score = 113 bits (124), Expect = 7e-20 Identities = 218/318 (69%), Gaps = 8/318 (3%) Strand=Plus/Plus Query 96807 ACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATG-CAATGTCACG 96865 || ||||| | ||| || || || || ||||| || ||| ||| || || || | Sbjct 115691 ACTAACGGAACTTCCAACGGGCTTGTCCCTATGCTTCGAGTGTTCAACAACACTG-CAAG 115749 Query 96866 ATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTG 96925 ||||||| |||||||| || || || || || ||| | || ||||| |||| || || Sbjct 115750 ATACGTTGACCAGGGCGGGAACAAGCGCCCTGGTGCTTTCGCTATCTACCTGGAGCCCTG 115809 Query 96926 GCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACG 96985 |||| | ||| | ||||| || | || | ||||| ||| || ||||||| | Sbjct 115810 GCACTCCGACATCTTTGAGTTCTTGGACCTTCGCAAGAACCACGGTAAGGAAGAGGTCAG 115869 Query 96986 AGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAA--- 97042 ||| | ||| | || ||||| |||||| || ||| | ||||||||||| || | Sbjct 115870 AGCACGTGACCTCTTCTATGCCCTCTGGACTCCCGATCTCTTCATGAAGCGTGTTGAGTC 115929 Query 97043 CGACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTG 97102 |||||| |||||| |||| | ||||| | | | |||||||| || ||| || Sbjct 115930 TAACGGTG---ACTGGACCCTATTCTGCCCAAATGAGGCTCCCGGTCTTTCTGATGTCTA 115986 Query 97103 GGGCGAAGAGTTTGAGGC 97120 ||||| ||||||||||| Sbjct 115987 TGGCGATGAGTTTGAGGC 116004 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741051391088680