Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017
-02-15] 843 sequences; 47,573,060 total letters
Query= NC_005179.1
Length=134721
Score E
Sequences producing significant alignments: (Bits) Value
seq744 127 2e-24
>seq744
Length=38458
Score = 127 bits (140), Expect = 2e-24
Identities = 462/715 (65%), Gaps = 16/715 (2%)
Strand=Plus/Plus
Query 12986 TCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTATTAATTTTACA 13045
|||||||| || || ||||| || ||| ||| || | ||||| || || | ||
Sbjct 30668 TCAGCAACGAATTCGATGTATTGGCACATCAAAGCAGAATTCATGCCGATGAGAGCAACG 30727
Query 13046 GGCATAGCTTCTGTTAAAAAGtttttttCTATATCAACTGCTTCGATAACTATGTCTCTT 13105
|| | ||| || || ||||| | | ||| || || ||||| | | || || |||
Sbjct 30728 GGAAGAGCATCCGTCAAAAATTCCTGTTCAATGCTGACAGCTTCCAAGATGATATC-CTT 30786
Query 13106 ATTACGTTCT---CTAATGGAGGATTTGATAGATGCTTAAACATCATACATGCAAAATCA 13162
|||||| ||| ||| | || ||||| |||| | | ||| ||||| |||
Sbjct 30787 GACGCGTTCTTGGCTA--GGACGCTTACGAAGATGGGTAAATAAAAGACAAGCAAAGTCA 30844
Query 13163 CAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCGGCATAAGC 13222
|| | |||||||| | || || | || || ||||| | ||| ||||| |
Sbjct 30845 GTATGAAGGCCTTCATCACGACAGATCAATTCATTGCTGAATGTCAAACCAGGCATCAAA 30904
Query 13223 CCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATTCCTTCAACT 13282
|| ||||| || | |||||| || | |||||| ||||| || || || || ||||| ||
Sbjct 30905 CCACGTTTCTTGAGCCAAAAAATGGAAGCAAAGGAACCAGAGAAGAAAATACCTTCGACA 30964
Query 13283 GCTGCAAACGCTATCAACCTTTCACCATACGTACTATTTTTACTCTCTATCCACTTTCTG 13342
|| ||||| || | | | ||| || | | || || | |||||||| |
Sbjct 30965 GCAGCAAAGGCAACAAGACGCTCAGCAAAAGAACCGTT---AGAGGAAATCCACTTGAAG 31021
Query 13343 GCCCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTTCTATTGCGTTAAATAAATAAttt 13402
||||| | || ||| ||| | || ||| | || || || ||| | ||||
Sbjct 31022 GCCCAATCAGCCTTTCTTTTGATACAAGGGATAGTGTCAATAGCAGAAAAGAGC--ATTT 31079
Query 13403 ttttC-CTTACTG-TCTAAAATATAAGTATCTATCAATAAGCTATACATTTCTGAATGAA 13460
|||| ||| | ||| |||||||| || ||||| | || || |||||| ||||
Sbjct 31080 CTTTCTCTTGGTTATCTTTGATATAAGTGTCAATCAAAAGACTGTAAGTTTCTGCGTGAA 31139
Query 13461 TATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATACCTGAACTTCGG 13520
||||||| ||| ||||| || ||||| |||||| |||| || | | || |||||
Sbjct 31140 TATTTTCAATCATGATTTGAAAGCCATAGAAACATTTAGCTTCAGGAATCTTGACTTCAT 31199
Query 13521 AGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCAGCaaaaaaaGCAA 13580
|||| ||| | |||||||| ||||| || || || | ||||||| || || |
Sbjct 31200 CACAAAAGTTTTGAACCAAGTTTTCATTAACAATGCCATCTGAACCAGCAAAGAAGGCTA 31259
Query 13581 GTATGTGCTTAATAAAttttttttCGTTTTCTGACAAC---TTTAACCAATCTGGAAAAT 13637
| | | ||||| ||||||||| | || | ||| |||||| ||| |
Sbjct 31260 AGACGCGAGAGATAAAGAAGCGTTCGTTTTCGGTCATCTTGTTTTCCCAATCATGAAGGT 31319
Query 13638 CTTTTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAGCAACAGCCTTCTTATA 13692
| || ||||| | || ||| | |||||||| ||||| |||| ||||||||
Sbjct 31320 CCTTGCTCAAATCGATTTCTTCAGCTGTCCAAAAGGAAGCTTCAGCTTTCTTATA 31374
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430977972059886
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |