Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017 -02-15] 843 sequences; 47,573,060 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq812 98.7 9e-16 >seq812 Length=913560 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/220 (72%), Gaps = 8/220 (4%) Strand=Plus/Plus Query 94792 TCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA 94851 ||||| |||| ||||| ||||||||||| || | ||| || ||| || || || || Sbjct 528536 TCGCAGAACCAGGTGCAGGGTAGATTCCTTCTGGATGTTGTAGTCGGACA-AG-GTACGA 528593 Query 94852 A--TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCT 94909 ||||||||||| || || ||||||| | | ||||| || ||||| |||||||| Sbjct 528594 CCGTCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCAGGAGGGATACCTTCC 528653 Query 94910 TTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGG--TCGACGTCAATCG 94967 ||||| | ||| || ||| ||| | | | ||||| || ||| || || || | | Sbjct 528654 TTGTCTTGAATCTTGCTCTTCACGTTGTCAATTGTGTC-GC-TGGATTCAACCTCCAATG 528711 Query 94968 TGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||| || || ||||| | ||| || ||||| |||||||| Sbjct 528712 TGATAGTCTTGCCAGTCAAAGTCTTAACAAAAATCTGCAT 528751 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 |||| || | ||| | || || ||||| || | ||| || ||| | ||| | | Sbjct 528993 CGCAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGTGTGCGGCCA 529052 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 ||||| ||||| ||||| | ||||| | | |||||| || ||||| ||||| || || Sbjct 529053 TCCTCAAGCTGCTTTCCAGCGAAGATCAGACGTTGCTGGTCGGGAGGGATACCCTCCTTA 529112 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | || || ||||||| | ||| ||||| | || || || | ||||| Sbjct 529113 TCCTGGATCTTGCTCTTGACGTTGTCGATGGTGTCGGAAGACTCAACCTCGAGGGTGATA 529172 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || ||||||||||| || ||||| ||||||||||| Sbjct 529173 GTCTTTCCAGTAAGGGTCTTCACGAAGATCTGCAT 529207 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448286476131480