Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017 -02-15] 843 sequences; 47,573,060 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value seq219 178 2e-39 >seq219 Length=30711 Score = 178 bits (196), Expect = 2e-39 Identities = 357/526 (68%), Gaps = 4/526 (1%) Strand=Plus/Plus Query 193645 CTGAGATCTATAATCTTGGTGCTCAAAGTCATGTTAAAGTTTCCTTTGAGATGCCAGAGT 193704 |||| | || ||||||| |||||| |||||| || || || ||||| ||| |||| | Sbjct 12603 CTGAAGTTTACAATCTTGCAGCTCAATCTCATGTCAAGGTCTCTTTTGACATGTCAGAAT 12662 Query 193705 ATACTTCTAATGTTGATGCTTTAGGAACTCTTAGAATACTTGAAGCAGTTCGTATGTTGG 193764 |||| | | || || ||| | || || ||| | ||||||| || | |||| ||| Sbjct 12663 ATACCGGTGACGTCGACGCTCTTGGCACACTTCGTTTACTTGATGCTATCCGTAC-TTGT 12721 Query 193765 GAATGGA--GAAAGATGTTCGCATCTATCAGGCATCTACCAGCGAACTGTATGGTGGTGT 193822 | | | || | |||||| ||||||| || |||||| ||||| |||||| || Sbjct 12722 GGTTTAACCGATCG-TGTTCGTTTCTATCAAGCTTCTACCTCTGAACTCTATGGTAAAGT 12780 Query 193823 TCTAGGCACTCCACTATCAGAAACCACACCATTTCATCCACGCTCTCCTTATGGTGTAGC 193882 | | || || | | ||||| ||||| || |||| || || |||||||||||||| Sbjct 12781 AGTTGAAACACCCCAAAAGGAAACAACACCCTTCTATCCCCGTTCCCCTTATGGTGTAGC 12840 Query 193883 AAAGTTGTATGGTTATTGGATCATCAAGAATTATCGTGAGTCATATGGATTCCACGCTAG 193942 ||| | |||||||||||||| | || || ||||| ||||| | || | Sbjct 12841 CAAGCTTTATGGTTATTGGATTACGGTCAACTACCGTGAATCATACAATATGTTTGCCTG 12900 Query 193943 TTCTGGTATTCTCTTCAATCACGAATCTCCAAGAAGAGGTGAGACATTTGTAACTCGTAA 194002 | ||||||||| ||||| || ||||| || | | || || || || || || || Sbjct 12901 TAATGGTATTCTATTCAACCATGAATCACCTCGTCGTGGCCGTACCTTCGTTACCCGAAA 12960 Query 194003 GATTACACAAGGTTTATCTAAGATCTCTGTTGGATTACAGAAGATTCTTTATCTTGGTAA 194062 |||||| | | | | | | ||| | ||| || || |||||||| ||||| Sbjct 12961 GATTACTCGTGCTGTCGCAGATATCCACTTGGGACGTCAAGAGTGCCTTTATCTCGGTAA 13020 Query 194063 TCTTAATGCTAAGAGGGATTGGGGACACGCAAAGGATTATGTTGAAGCGATGTGGTTAAT 194122 | || |||||||| | ||||||||||| || |||||||| |||| |||||| | || Sbjct 13021 TATTGATGCTAAGCGTGATTGGGGACATGCTCGTGATTATGTCGAAGGTATGTGGCTCAT 13080 Query 194123 GTTGCAACAGGATGAACCCGATGATTATGTGATTGCTACAGGTGAA 194168 | |||| || ||| | || | |||| || | ||||| |||||| Sbjct 13081 GCTGCAGCAAGATCAGCCTCAAGATTTCGTCTTGGCTACTGGTGAA 13126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 807546690387080