Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017
-02-15] 843 sequences; 47,573,060 total letters
Query= NC_006883.2
Length=252401
Score E
Sequences producing significant alignments: (Bits) Value
seq219 178 2e-39
>seq219
Length=30711
Score = 178 bits (196), Expect = 2e-39
Identities = 357/526 (68%), Gaps = 4/526 (1%)
Strand=Plus/Plus
Query 193645 CTGAGATCTATAATCTTGGTGCTCAAAGTCATGTTAAAGTTTCCTTTGAGATGCCAGAGT 193704
|||| | || ||||||| |||||| |||||| || || || ||||| ||| |||| |
Sbjct 12603 CTGAAGTTTACAATCTTGCAGCTCAATCTCATGTCAAGGTCTCTTTTGACATGTCAGAAT 12662
Query 193705 ATACTTCTAATGTTGATGCTTTAGGAACTCTTAGAATACTTGAAGCAGTTCGTATGTTGG 193764
|||| | | || || ||| | || || ||| | ||||||| || | |||| |||
Sbjct 12663 ATACCGGTGACGTCGACGCTCTTGGCACACTTCGTTTACTTGATGCTATCCGTAC-TTGT 12721
Query 193765 GAATGGA--GAAAGATGTTCGCATCTATCAGGCATCTACCAGCGAACTGTATGGTGGTGT 193822
| | | || | |||||| ||||||| || |||||| ||||| |||||| ||
Sbjct 12722 GGTTTAACCGATCG-TGTTCGTTTCTATCAAGCTTCTACCTCTGAACTCTATGGTAAAGT 12780
Query 193823 TCTAGGCACTCCACTATCAGAAACCACACCATTTCATCCACGCTCTCCTTATGGTGTAGC 193882
| | || || | | ||||| ||||| || |||| || || ||||||||||||||
Sbjct 12781 AGTTGAAACACCCCAAAAGGAAACAACACCCTTCTATCCCCGTTCCCCTTATGGTGTAGC 12840
Query 193883 AAAGTTGTATGGTTATTGGATCATCAAGAATTATCGTGAGTCATATGGATTCCACGCTAG 193942
||| | |||||||||||||| | || || ||||| ||||| | || |
Sbjct 12841 CAAGCTTTATGGTTATTGGATTACGGTCAACTACCGTGAATCATACAATATGTTTGCCTG 12900
Query 193943 TTCTGGTATTCTCTTCAATCACGAATCTCCAAGAAGAGGTGAGACATTTGTAACTCGTAA 194002
| ||||||||| ||||| || ||||| || | | || || || || || || ||
Sbjct 12901 TAATGGTATTCTATTCAACCATGAATCACCTCGTCGTGGCCGTACCTTCGTTACCCGAAA 12960
Query 194003 GATTACACAAGGTTTATCTAAGATCTCTGTTGGATTACAGAAGATTCTTTATCTTGGTAA 194062
|||||| | | | | | | ||| | ||| || || |||||||| |||||
Sbjct 12961 GATTACTCGTGCTGTCGCAGATATCCACTTGGGACGTCAAGAGTGCCTTTATCTCGGTAA 13020
Query 194063 TCTTAATGCTAAGAGGGATTGGGGACACGCAAAGGATTATGTTGAAGCGATGTGGTTAAT 194122
| || |||||||| | ||||||||||| || |||||||| |||| |||||| | ||
Sbjct 13021 TATTGATGCTAAGCGTGATTGGGGACATGCTCGTGATTATGTCGAAGGTATGTGGCTCAT 13080
Query 194123 GTTGCAACAGGATGAACCCGATGATTATGTGATTGCTACAGGTGAA 194168
| |||| || ||| | || | |||| || | ||||| ||||||
Sbjct 13081 GCTGCAGCAAGATCAGCCTCAAGATTTCGTCTTGGCTACTGGTGAA 13126
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 807546690387080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |