Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017 -02-15] 843 sequences; 47,573,060 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq744 251 9e-62 seq578 154 2e-32 seq657 120 4e-22 seq723 105 8e-18 >seq744 Length=38458 Score = 251 bits (278), Expect = 9e-62 Identities = 563/843 (67%), Gaps = 3/843 (0%) Strand=Plus/Plus Query 33015 TTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTC 33074 ||| || ||| ||||| ||||| || || || || || |||| | || || | || Sbjct 30544 TTGATAGTCAGAGACACGCTTTTCAAAGAAGTTGGTCTTGCCTTGAAGAGAGATCATGTC 30603 Query 33075 CATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAA 33134 ||| || ||||| ||||||||| | | ||||| || | |||||| | || || | Sbjct 30604 CATAAAGTCAAATGGATTGGTAGCCATGTAAATCTTGTCAAATCCAAGAGCAACCATGAG 30663 Query 33135 TCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTT 33194 | ||| || |||||||| || ||| ||||| || ||||||| || || || Sbjct 30664 ACGATCAGCAACGAATTCGATGTATTGGCACATCAAAGCAGAATTCATGCCGATGAGAGC 30723 Query 33195 AACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATAGA 33254 ||| |||||||| | || | |||||| ||||||||| || || || || ||| Sbjct 30724 AACGGGAAGAGCATCCGTCAAAAATTCCTGTTCAATGCTGACAGCTTCCAAGATGATATC 30783 Query 33255 TCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAAATC 33314 | ||| ||||| || || | | | ||| |||| | | ||| || || || Sbjct 30784 CTTGACGCGTTCTTGGCTAGGACGCTTACGAAGATGGGTAAATAAAAGACAAGCAAAGTC 30843 Query 33315 GCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAG 33374 || || || || || | || || | ||| ||| || || | || ||||| | Sbjct 30844 AGTATGAAGGCCTTCATCACGACAGATCAATTCATTGCTGAATGTCAAACCAGGCATCAA 30903 Query 33375 GCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTAC 33434 ||||| || || |||||||| |||||||| || || ||||| ||||| || ||||| || Sbjct 30904 ACCACGTTTCTTGAGCCAAAAAATGGAAGCAAAGGAACCAGAGAAGAAAATACCTTCGAC 30963 Query 33435 TGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCATGTATCCACTTTTGAGC 33494 ||||||||||||| ||| | ||| || || || | |||||||| || Sbjct 30964 AGCAGCAAAGGCAACAAGACGCTCAGCAAAAGAACCGTTAGAGGAAATCCACTTGAAGGC 31023 Query 33495 CCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGttttt 33554 |||||| ||||| |||| | |||||| || || || || ||| |||||| | ||| Sbjct 31024 CCAATCAGCCTTTCTTTTGATACAAGGGATAGTGTCAATAGCAGAAAAGAGCATTTCTTT 31083 Query 33555 ttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTT 33614 || | ||||||| | |||||| || ||||||||||| || |||| | ||||| || Sbjct 31084 CTCTTGGTTATCTTTGATATAAGTGTCAATCAAAAGACTGTAAGTTTCTGCGTGAATATT 31143 Query 33615 TTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACA 33674 |||||| || ||||| || ||||||||| |||| || | ||||| ||||| ||| Sbjct 31144 TTCAATCATGATTTGAAAGCCATAGAAACATTTAGCTTCAGGAATCTTGACTTCATCACA 31203 Query 33675 AAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATAC 33734 ||| || |||| |||||||| || || || || | ||||| || || || || Sbjct 31204 AAAGTTTTGAACCAAGTTTTCATTAACAATGCCATCTGAACCAGCAAAGAAGGCTAAGAC 31263 Query 33735 ATGTTTTATAAAATATTTTTCGTCT--GGTGTTAGT-TTATTCCAATCATTGATATCTTT 33791 | ||||| | ||||| | ||| | | || | |||||||| | || || Sbjct 31264 GCGAGAGATAAAGAAGCGTTCGTTTTCGGTCATCTTGTTTTCCCAATCATGAAGGTCCTT 31323 Query 33792 AGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATGTTCCA 33851 | ||| | |||||| |||||||||| || || || || || ||||| | | ||| Sbjct 31324 GCTCAAATCGATTTCTTCAGCTGTCCAAAAGGAAGCTTCAGCTTTCTTATAGAATTGCCA 31383 Query 33852 GAT 33854 ||| Sbjct 31384 GAT 31386 >seq578 Length=440600 Score = 154 bits (170), Expect = 2e-32 Identities = 547/842 (65%), Gaps = 16/842 (2%) Strand=Plus/Minus Query 63197 CCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-A 63255 ||| || |||| | || || || ||||| |||||||| ||| |||| || || ||| | Sbjct 115942 CCAGTCACCGTTAGACTCAACACGCTTCATGAAGAGATCGGGAGTCCAGAGGGC-ATAGA 115884 Query 63256 ATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCA 63315 | || || | | ||| || || || || ||||| ||| || | |||| | | Sbjct 115883 AGAGGTCACGTGCTCTGACCTCTTCCTTACCGTGGTTCTTGCGAAGGTCCAAGAACTCAA 115824 Query 63316 TAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTC 63375 || || || ||||| || |||| ||| || || | | | ||||| || ||||| || | Sbjct 115823 AGATGTCGGAGTGCCAGGGCTCCAGGTAGATAGCGAAAGCACCAGGGCGCTTGTTCCCGC 115764 Query 63376 CCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTG 63435 |||| || | |||||| || ||||| || | |||| | ||| || | || ||||| | Sbjct 115763 CCTGGTCAACGTATCTTGCAGTGTTGTTGAACACTCGAAGCATAGGGACAAGCCCGTTGG 115704 Query 63436 ATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAA--TTGATAG 63493 | | || || ||||| ||| || || | ||||| ||| | |||| | Sbjct 115703 AAGTTCCGTTAGTACCACCGATGTAAGAACCTGTAGCACGGATACGGTGGACGTTGA--G 115646 Query 63494 ACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACC 63553 ||| || || || || | || ||||| | || || || || |||||||||||||| Sbjct 115645 ACCAATACCACCCGCAGTCTTGGAGATCATGGCACAAGTCTTCAAGGTGTCATAGATACC 115586 Query 63554 CTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGT 63613 ||| ||||| || || |||| | | || || ||| | || || | || ||| Sbjct 115585 CTCAATGCTGTCCTCCTTCATATCGATAAGGAAGCAGGAGGCCAGCTGCGGCTGAGGAGT 115526 Query 63614 TCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTA 63673 || || || || | || || || ||||| || || |||| | || | |||||||| Sbjct 115525 ACCGGCGTTGAACAGAGTCGGCGAGGCGTGAGTGAAGTATTTCTGGGACATCAGATTGTA 115466 Query 63674 CGTCTCAATAGCTGAGTCTATATCC-CATTGATGAATTCCTACTGCGACACGCATTAACA 63732 ||||| ||| | || | || || | || ||||| || || |||||||| | || Sbjct 115465 GGTCTCGATAACCTTCTCGAGGTCATCACCG-TGGATTCCGACCGCAACACGCATAATCA 115407 Query 63733 TGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAG 63792 |||||||||| | ||| | | ||| || || | || || ||| ||||| || Sbjct 115406 TGTGCTGAGGACGCTCAGCAACCTTTCCATTGATGCGGAGCAGATACGATCGTTCCAGAG 115347 Query 63793 TTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAG 63850 | || || || || || | ||| ||||| || || || |||| |||| | ||||| | Sbjct 115346 TCTTGAATCCGAAGTATTGGTAGTTGAAA--TCACGGTCATAAACAATAGCGGAGTTCAA 115289 Query 63851 TTTATCCTTATATTTGTTAACTATATCCATGGTGATACTT--GAAATAATCGGAGAATGT 63908 || |||| || || ||| || | ||| | | ||| || || ||||| | | Sbjct 115288 TTCATCCGCATGCTTCATAATGAT-TTCAT-ACGTTTCTTTCGATATCATCGGCGCCGGC 115231 Query 63909 TTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttt 63968 || ||| || || || ||||||| | | | |||| || || | || | || Sbjct 115230 TTATTATTCTTCGGGTTGACATAGTGGTAAAGGTCCTGGATGACCAGAGAGAACTGCTTC 115171 Query 63969 tttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCCGGA 64028 || || | |||||| || || || |||||||| | || || || || ||||| || || Sbjct 115170 TTGGTCTGCTTGTGGAGGTTGGACACGGCTATACGCGCAGCGAGGATAGCATAGTCTGGG 115111 Query 64029 TG 64030 || Sbjct 115110 TG 115109 >seq657 Length=446211 Score = 120 bits (132), Expect = 4e-22 Identities = 119/154 (77%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 33295 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 33354 |||| || ||| ||||| ||| |||||||||||| || | | || || ||||| || Sbjct 212063 AACAGCAGACAAGCGAAGTCGGTGTGCAGACCCTCATCACGAGAGATCAGCTCGTTAGAG 212122 Query 33355 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCA 33414 || || || || ||||| ||||||||||| || ||||| || || || ||||| || ||| Sbjct 212123 AAGGTCAGACCAGGCATGAGGCCACGCTTCTTCAGCCAGAAGATAGAGGCGAAAGAGCCA 212182 Query 33415 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAA 33448 || |||||||| || || || ||||| ||||||| Sbjct 212183 GAGAAGAAGATACCCTCAACAGCAGCGAAGGCAA 212216 >seq723 Length=18298 Score = 105 bits (116), Expect = 8e-18 Identities = 277/421 (66%), Gaps = 5/421 (1%) Strand=Plus/Plus Query 62033 ATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTT 62092 ||||||||| || || |||| || |||| | ||||| |||||| || | ||| Sbjct 4430 ATAGTACATGCCAGTCTTTAATCCCTTCTTCCAGGCATAAAAGTGCATAGAGGTCAATTT 4489 Query 62093 GGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCC 62152 | | | | || || || || | ||||||||||||| ||| ||||| || ||||| Sbjct 4490 GCCAAAGTTTGGTTCGGCAGTAAACAAATTCATAGATTGAGATTGGTCGATAAAAGCTCC 4549 Query 62153 CCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAAC 62212 || || || ||||| | || || || |||||| ||| ||||| | ||||| || | Sbjct 4550 TCTATCAGCGGCCATGTCAATAATAGTTCTTTGTGAAATCTCCCATACTGTTTTGTATAG 4609 Query 62213 TCGCTTAATATCTTCTGGAAGGTTTGTATTCTGAATGGAT----CCACCATCTGCCATAA 62268 || | ||| || |||| | | | | | ||||| || |||| || || | Sbjct 4610 CTTTTTGAGATCATCAGGAACGCCGGGAATACG-TTGGATACTACCGCCATGAGCAATCA 4668 Query 62269 TCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCG 62328 || | |||||||| | |||||||||||| | ||| | | | | | | |||| Sbjct 4669 TCATGTTCTTGATGTTATCATTCCATAAATCGAGCTCAATGAGGTCATTCAATAAATGCT 4728 Query 62329 GATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACG 62388 | || |||| ||| ||||| ||| || | || || |||||||| || || || | Sbjct 4729 GGTTGACTATTTGGAATTCACCACTTTGAACACGACGCGTATAAATATTGCTAGTGTAAG 4788 Query 62389 GTTCCACCGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCA 62448 | || | | || ||||| ||||| |||||| ||| ||||| |||||||| || | Sbjct 4789 GCTCGAAGCATTCGTTATTGCCCAATATTTGACTAGTGCTAGCAGTAGGCATAGGAGCAA 4848 Query 62449 C 62449 | Sbjct 4849 C 4849 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622940635693880