Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017
-02-15] 843 sequences; 47,573,060 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq744 251 9e-62
seq578 154 2e-32
seq657 120 4e-22
seq723 105 8e-18
>seq744
Length=38458
Score = 251 bits (278), Expect = 9e-62
Identities = 563/843 (67%), Gaps = 3/843 (0%)
Strand=Plus/Plus
Query 33015 TTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTC 33074
||| || ||| ||||| ||||| || || || || || |||| | || || | ||
Sbjct 30544 TTGATAGTCAGAGACACGCTTTTCAAAGAAGTTGGTCTTGCCTTGAAGAGAGATCATGTC 30603
Query 33075 CATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAA 33134
||| || ||||| ||||||||| | | ||||| || | |||||| | || || |
Sbjct 30604 CATAAAGTCAAATGGATTGGTAGCCATGTAAATCTTGTCAAATCCAAGAGCAACCATGAG 30663
Query 33135 TCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTT 33194
| ||| || |||||||| || ||| ||||| || ||||||| || || ||
Sbjct 30664 ACGATCAGCAACGAATTCGATGTATTGGCACATCAAAGCAGAATTCATGCCGATGAGAGC 30723
Query 33195 AACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATAGA 33254
||| |||||||| | || | |||||| ||||||||| || || || || |||
Sbjct 30724 AACGGGAAGAGCATCCGTCAAAAATTCCTGTTCAATGCTGACAGCTTCCAAGATGATATC 30783
Query 33255 TCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAAATC 33314
| ||| ||||| || || | | | ||| |||| | | ||| || || ||
Sbjct 30784 CTTGACGCGTTCTTGGCTAGGACGCTTACGAAGATGGGTAAATAAAAGACAAGCAAAGTC 30843
Query 33315 GCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAG 33374
|| || || || || | || || | ||| ||| || || | || ||||| |
Sbjct 30844 AGTATGAAGGCCTTCATCACGACAGATCAATTCATTGCTGAATGTCAAACCAGGCATCAA 30903
Query 33375 GCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTAC 33434
||||| || || |||||||| |||||||| || || ||||| ||||| || ||||| ||
Sbjct 30904 ACCACGTTTCTTGAGCCAAAAAATGGAAGCAAAGGAACCAGAGAAGAAAATACCTTCGAC 30963
Query 33435 TGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCATGTATCCACTTTTGAGC 33494
||||||||||||| ||| | ||| || || || | |||||||| ||
Sbjct 30964 AGCAGCAAAGGCAACAAGACGCTCAGCAAAAGAACCGTTAGAGGAAATCCACTTGAAGGC 31023
Query 33495 CCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGttttt 33554
|||||| ||||| |||| | |||||| || || || || ||| |||||| | |||
Sbjct 31024 CCAATCAGCCTTTCTTTTGATACAAGGGATAGTGTCAATAGCAGAAAAGAGCATTTCTTT 31083
Query 33555 ttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTT 33614
|| | ||||||| | |||||| || ||||||||||| || |||| | ||||| ||
Sbjct 31084 CTCTTGGTTATCTTTGATATAAGTGTCAATCAAAAGACTGTAAGTTTCTGCGTGAATATT 31143
Query 33615 TTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACA 33674
|||||| || ||||| || ||||||||| |||| || | ||||| ||||| |||
Sbjct 31144 TTCAATCATGATTTGAAAGCCATAGAAACATTTAGCTTCAGGAATCTTGACTTCATCACA 31203
Query 33675 AAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATAC 33734
||| || |||| |||||||| || || || || | ||||| || || || ||
Sbjct 31204 AAAGTTTTGAACCAAGTTTTCATTAACAATGCCATCTGAACCAGCAAAGAAGGCTAAGAC 31263
Query 33735 ATGTTTTATAAAATATTTTTCGTCT--GGTGTTAGT-TTATTCCAATCATTGATATCTTT 33791
| ||||| | ||||| | ||| | | || | |||||||| | || ||
Sbjct 31264 GCGAGAGATAAAGAAGCGTTCGTTTTCGGTCATCTTGTTTTCCCAATCATGAAGGTCCTT 31323
Query 33792 AGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATGTTCCA 33851
| ||| | |||||| |||||||||| || || || || || ||||| | | |||
Sbjct 31324 GCTCAAATCGATTTCTTCAGCTGTCCAAAAGGAAGCTTCAGCTTTCTTATAGAATTGCCA 31383
Query 33852 GAT 33854
|||
Sbjct 31384 GAT 31386
>seq578
Length=440600
Score = 154 bits (170), Expect = 2e-32
Identities = 547/842 (65%), Gaps = 16/842 (2%)
Strand=Plus/Minus
Query 63197 CCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-A 63255
||| || |||| | || || || ||||| |||||||| ||| |||| || || ||| |
Sbjct 115942 CCAGTCACCGTTAGACTCAACACGCTTCATGAAGAGATCGGGAGTCCAGAGGGC-ATAGA 115884
Query 63256 ATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCA 63315
| || || | | ||| || || || || ||||| ||| || | |||| | |
Sbjct 115883 AGAGGTCACGTGCTCTGACCTCTTCCTTACCGTGGTTCTTGCGAAGGTCCAAGAACTCAA 115824
Query 63316 TAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTC 63375
|| || || ||||| || |||| ||| || || | | | ||||| || ||||| || |
Sbjct 115823 AGATGTCGGAGTGCCAGGGCTCCAGGTAGATAGCGAAAGCACCAGGGCGCTTGTTCCCGC 115764
Query 63376 CCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTG 63435
|||| || | |||||| || ||||| || | |||| | ||| || | || ||||| |
Sbjct 115763 CCTGGTCAACGTATCTTGCAGTGTTGTTGAACACTCGAAGCATAGGGACAAGCCCGTTGG 115704
Query 63436 ATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAA--TTGATAG 63493
| | || || ||||| ||| || || | ||||| ||| | |||| |
Sbjct 115703 AAGTTCCGTTAGTACCACCGATGTAAGAACCTGTAGCACGGATACGGTGGACGTTGA--G 115646
Query 63494 ACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACC 63553
||| || || || || | || ||||| | || || || || ||||||||||||||
Sbjct 115645 ACCAATACCACCCGCAGTCTTGGAGATCATGGCACAAGTCTTCAAGGTGTCATAGATACC 115586
Query 63554 CTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGT 63613
||| ||||| || || |||| | | || || ||| | || || | || |||
Sbjct 115585 CTCAATGCTGTCCTCCTTCATATCGATAAGGAAGCAGGAGGCCAGCTGCGGCTGAGGAGT 115526
Query 63614 TCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTA 63673
|| || || || | || || || ||||| || || |||| | || | ||||||||
Sbjct 115525 ACCGGCGTTGAACAGAGTCGGCGAGGCGTGAGTGAAGTATTTCTGGGACATCAGATTGTA 115466
Query 63674 CGTCTCAATAGCTGAGTCTATATCC-CATTGATGAATTCCTACTGCGACACGCATTAACA 63732
||||| ||| | || | || || | || ||||| || || |||||||| | ||
Sbjct 115465 GGTCTCGATAACCTTCTCGAGGTCATCACCG-TGGATTCCGACCGCAACACGCATAATCA 115407
Query 63733 TGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAG 63792
|||||||||| | ||| | | ||| || || | || || ||| ||||| ||
Sbjct 115406 TGTGCTGAGGACGCTCAGCAACCTTTCCATTGATGCGGAGCAGATACGATCGTTCCAGAG 115347
Query 63793 TTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAG 63850
| || || || || || | ||| ||||| || || || |||| |||| | ||||| |
Sbjct 115346 TCTTGAATCCGAAGTATTGGTAGTTGAAA--TCACGGTCATAAACAATAGCGGAGTTCAA 115289
Query 63851 TTTATCCTTATATTTGTTAACTATATCCATGGTGATACTT--GAAATAATCGGAGAATGT 63908
|| |||| || || ||| || | ||| | | ||| || || ||||| | |
Sbjct 115288 TTCATCCGCATGCTTCATAATGAT-TTCAT-ACGTTTCTTTCGATATCATCGGCGCCGGC 115231
Query 63909 TTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttt 63968
|| ||| || || || ||||||| | | | |||| || || | || | ||
Sbjct 115230 TTATTATTCTTCGGGTTGACATAGTGGTAAAGGTCCTGGATGACCAGAGAGAACTGCTTC 115171
Query 63969 tttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCCGGA 64028
|| || | |||||| || || || |||||||| | || || || || ||||| || ||
Sbjct 115170 TTGGTCTGCTTGTGGAGGTTGGACACGGCTATACGCGCAGCGAGGATAGCATAGTCTGGG 115111
Query 64029 TG 64030
||
Sbjct 115110 TG 115109
>seq657
Length=446211
Score = 120 bits (132), Expect = 4e-22
Identities = 119/154 (77%), Gaps = 0/154 (0%)
Strand=Plus/Plus
Query 33295 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 33354
|||| || ||| ||||| ||| |||||||||||| || | | || || ||||| ||
Sbjct 212063 AACAGCAGACAAGCGAAGTCGGTGTGCAGACCCTCATCACGAGAGATCAGCTCGTTAGAG 212122
Query 33355 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCA 33414
|| || || || ||||| ||||||||||| || ||||| || || || ||||| || |||
Sbjct 212123 AAGGTCAGACCAGGCATGAGGCCACGCTTCTTCAGCCAGAAGATAGAGGCGAAAGAGCCA 212182
Query 33415 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAA 33448
|| |||||||| || || || ||||| |||||||
Sbjct 212183 GAGAAGAAGATACCCTCAACAGCAGCGAAGGCAA 212216
>seq723
Length=18298
Score = 105 bits (116), Expect = 8e-18
Identities = 277/421 (66%), Gaps = 5/421 (1%)
Strand=Plus/Plus
Query 62033 ATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTT 62092
||||||||| || || |||| || |||| | ||||| |||||| || | |||
Sbjct 4430 ATAGTACATGCCAGTCTTTAATCCCTTCTTCCAGGCATAAAAGTGCATAGAGGTCAATTT 4489
Query 62093 GGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCC 62152
| | | | || || || || | ||||||||||||| ||| ||||| || |||||
Sbjct 4490 GCCAAAGTTTGGTTCGGCAGTAAACAAATTCATAGATTGAGATTGGTCGATAAAAGCTCC 4549
Query 62153 CCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAAC 62212
|| || || ||||| | || || || |||||| ||| ||||| | ||||| || |
Sbjct 4550 TCTATCAGCGGCCATGTCAATAATAGTTCTTTGTGAAATCTCCCATACTGTTTTGTATAG 4609
Query 62213 TCGCTTAATATCTTCTGGAAGGTTTGTATTCTGAATGGAT----CCACCATCTGCCATAA 62268
|| | ||| || |||| | | | | | ||||| || |||| || || |
Sbjct 4610 CTTTTTGAGATCATCAGGAACGCCGGGAATACG-TTGGATACTACCGCCATGAGCAATCA 4668
Query 62269 TCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCG 62328
|| | |||||||| | |||||||||||| | ||| | | | | | | ||||
Sbjct 4669 TCATGTTCTTGATGTTATCATTCCATAAATCGAGCTCAATGAGGTCATTCAATAAATGCT 4728
Query 62329 GATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACG 62388
| || |||| ||| ||||| ||| || | || || |||||||| || || || |
Sbjct 4729 GGTTGACTATTTGGAATTCACCACTTTGAACACGACGCGTATAAATATTGCTAGTGTAAG 4788
Query 62389 GTTCCACCGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCA 62448
| || | | || ||||| ||||| |||||| ||| ||||| |||||||| || |
Sbjct 4789 GCTCGAAGCATTCGTTATTGCCCAATATTTGACTAGTGCTAGCAGTAGGCATAGGAGCAA 4848
Query 62449 C 62449
|
Sbjct 4849 C 4849
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622940635693880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |