Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017
-02-15] 843 sequences; 47,573,060 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq609 113 4e-20
seq744 109 5e-19
seq657 96.9 3e-15
>seq609
Length=32548
Score = 113 bits (124), Expect = 4e-20
Identities = 107/137 (78%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
|||||||| || | ||||| |||||||| || || ||||| || ||||| ||||||
Sbjct 20853 GACACCATTGACAATGTCAAGCAAAAGATCCAAGATAAGGAAGGTATCCCTCCTGATCAA 20912
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
||| | ||||||| || ||| |||||||||||||| | | | | | | || || || |||
Sbjct 20913 CAACGTCTCATTTTCGCCGGTAAACAACTCGAAGACGGTCGTACCTTGAGTGATTACAAC 20972
Query 26949 ATTCAAAAAGAATCTAC 26965
|||||||| ||||||||
Sbjct 20973 ATTCAAAAGGAATCTAC 20989
>seq744
Length=38458
Score = 109 bits (120), Expect = 5e-19
Identities = 153/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 119655 ACACGTTTTTCaaaaaaaTTAGTCTTGCCCTCAAGAGATATGTTATTCATAAACTCGAAA 119714
||||| |||||||| || || |||||||| | |||||| || | | |||||| || ||
Sbjct 30557 ACACGCTTTTCAAAGAAGTTGGTCTTGCCTTGAAGAGAGATCATGTCCATAAAGTCAAAT 30616
Query 119715 GGATTTGCAGTGTTGAAATGCTTGTCGTAGCCCAACTCGAACAACAGTCGATCTGCCACA 119774
||||| | || || || |||||| | || | | | || || ||||| || ||
Sbjct 30617 GGATTGGTAGCCATGTAAATCTTGTCAAATCCAAGAGCAACCATGAGACGATCAGCAACG 30676
Query 119775 AACTCGATGTATTCGCACATGGATTGCGAATTCATGCCCAACATAGCGACCGGTAAAGCA 119834
|| |||||||||| |||||| | ||||||||||| | | ||| || || | ||||
Sbjct 30677 AATTCGATGTATTGGCACATCAAAGCAGAATTCATGCCGATGAGAGCAACGGGAAGAGCA 30736
Query 119835 TTGGTAAAGAAATCCTTTTCAATGTCGACCGCTTC 119869
| || || || |||| ||||||| ||| |||||
Sbjct 30737 TCCGTCAAAAATTCCTGTTCAATGCTGACAGCTTC 30771
>seq657
Length=446211
Score = 96.9 bits (106), Expect = 3e-15
Identities = 162/232 (70%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 119642 CTTGTACTCGCCCACACGTTTTTCaaaaaaaTTAGTCTTGCCCTCAAGAGATATGTTATT 119701
|| ||| || || ||||| || || || || || |||||||| | || || ||||| |
Sbjct 211783 CTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCGAGCGAGATGTTGTC 211842
Query 119702 CATAAACTCGAAAGGATTTGCAGTGTTGAAATGCTTGTCGTAGCCCAACTCGAACAACAG 119761
||| || ||||| || |||| | |||| | | ||| | || ||| | || || |||
Sbjct 211843 CATGAAGTCGAAGGGGTTTGTGGCGTTGTAGTACTTCTTGTTGCCAAGAGAGACCAGCAG 211902
Query 119762 TCGATCTGCCACAAACTCGATGTATTCGCACATG-GATTGCGAATTCATGCCCAACATAG 119820
|| || || || ||||||||||| | ||||||| | ||| || ||||| || | | |
Sbjct 211903 GCGGTCGGCAACGAACTCGATGTACTGGCACATGAGCTTG-GAGTTCATACCAAGGAGGG 211961
Query 119821 CGACCGGTAAAGCATTGGTAAAGAAATCCTTTTCAATGTCGACCGCTTCTAC 119872
| || || | || | || | ||| |||| ||||||||||| || || ||
Sbjct 211962 CAACGGGGAGGGCGTCCGTCAGGAACTCCTGCTCAATGTCGACGGCATCAAC 212013
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478657356094960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |