Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017 -02-15] 843 sequences; 47,573,060 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq578 190 5e-43 >seq578 Length=440600 Score = 190 bits (210), Expect = 5e-43 Identities = 618/952 (65%), Gaps = 16/952 (2%) Strand=Plus/Plus Query 364111 GCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATG 364170 || |||||||| |||| |||||| | || | |||| ||||| || | |||| ||| Sbjct 116109 GCTCAGAAGCTCTGGTATGCCATTCTCGAGGCCCAGACCGAGACCGGTAACCCCTTCATG 116168 Query 364171 TTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAG 364230 ||||||| ||| |||||||| ||| ||||||| || |||| ||||| || | |||| Sbjct 116169 CTGTACAAGGATGCGTGCAACAAGAAGAGCAACCAGAAGAACCTGGGTACTATCC-GCAG 116227 Query 364231 AGC-AACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAA 364289 | ||||| || || ||||| || || ||||| || ||||| ||| ||||| || || Sbjct 116228 CTCTAACCTCTGCACTGAGATCATCGAGTACACTGCCCCCGATGAGGTCGCCGTTTGCAA 116287 Query 364290 CCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAAAGATGGTACTTTTGACCACCA-----G 364344 | | || || | || || || | || || | | || | | || || | | Sbjct 116288 CTTGGCCTCTCTTGCTCTGCCCACTTTCGTTGATGCTGCTCGTGGCGAGTACGACTTTGG 116347 Query 364345 CAT-CTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTTATCGACAAGAA 364403 || || |||| || ||| | || | |||| || ||||| ||||||||| || Sbjct 116348 CAGACTGCATGAAGTCACCCAGGTTGTGGTTCGCAACCTGAACAAGATTATCGACATCAA 116407 Query 364404 TTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGCCCGATTGGTCTTGG 364463 || || || |||| || ||| || || |||| || ||||| |||| |||| Sbjct 116408 CTACTACCCCGTTCCGGAGGCCAAGAAGAGCAACTTGCGCCACCGCCCCATTGCCGTTGG 116467 Query 364464 TGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGATTCGCCTGACGC 364523 ||| | || || ||||||| || || ||| || | || || || || || || Sbjct 116468 TGTTAACGGTCTTGCTGACGCCTTCCTGGCTCTCCGTCTGCCGTTCGACTCTCCGGAGGC 116527 Query 364524 TCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACTGCTTC-GT 364582 || || | |||||||||| || || || | || ||||||| || || Sbjct 116528 CAAGCAGCTCAACATCCAGATCTTTGAGACCATCTACCACGGTGCTTTGACTGCATCCGT 116587 Query 364583 GTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTCTTTCGCAGG 364642 | ||| ||| | || || | | ||||| ||||||| || || || | || |||| Sbjct 116588 CGAACTTGCCAAGGAGCAGGGCACA-TACTCCTCTTATGAAGGCTCTCCCATCTCTCAGG 116646 Query 364643 GAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACTGGGATACGC 364702 | | | |||| || | ||| | || || ||| || ||| ||||| | | | Sbjct 116647 GCATCCTTCAGTACGACATGTGGGACAAGACCCCTACTGACCTTTGGGACTGGAGTTCAC 116706 Query 364703 TACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCC---CTCGTTACAGCGCCCATGC 364759 | | | || ||||||||| |||||| | |||||| || ||||||| Sbjct 116707 TGAAGGCGGAGATTGCCAAGCATGGTGTCCGCAACAGCTTGCTCGTT---GCTCCCATGC 116763 Query 364760 CCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTACAAGCA 364819 ||||||| ||| |||||||| || |||||| ||||||||||| | || | Sbjct 116764 CCACGGCCAGTACCAGTCAGATCCTGGGCTTCAACGAATGCTTCGAACCATACACTTCGA 116823 Query 364820 ATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCA 364879 | | || || || || || ||| | ||||| || | ||| ||||| | || | | Sbjct 116824 ACATCTACTCTCGTCGTGTCCTTGCGGGAGAGTTCCAGGTCGTTAACCCTTGGCTGCTGA 116883 Query 364880 AGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCATCGCCGCTA 364939 ||||||| ||||| ||| ||||| ||||| |||||||||| |||||| |||| Sbjct 116884 AGGATCTCGTCGACCTCGGCTTGTGGTCTGACAACATGAAGAACCGTATCATTGCCGAGG 116943 Query 364940 ATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTTACAAAACCG 364999 ||||| || |||||||| || |||| | || | ||| || | ||||| || | Sbjct 116944 GAGGTTCCGTCCAGAACATCCCCAACATTCCTGCCGACATCAAGGCTCTGTACAAGACTG 117003 Query 365000 TATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGGTGC 365051 | |||||||| || ||| || || || | ||||| || || || || || Sbjct 117004 TGTGGGAAATCTCTCAGCGTACCATCCTTCAGATGGCTGCAGACCGTGGCGC 117055 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303339522559226