Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017 -02-15] 843 sequences; 47,573,060 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq657 165 8e-36 seq812 131 2e-25 seq810 111 1e-19 seq578 100 3e-16 seq799 98.7 9e-16 seq609 96.9 3e-15 >seq657 Length=446211 Score = 165 bits (182), Expect = 8e-36 Identities = 347/512 (68%), Gaps = 9/512 (2%) Strand=Plus/Minus Query 46087 CCGTGCGTGCGCAAGAAAACCGACTGGGCGATGAAGTGGATCAACAGCAGCACCGCG--- 46143 || ||| | |||||||| |||||||||| || |||||| ||| | || | | Sbjct 212292 CCCTGCATCCGCAAGAAGGCCGACTGGGCCATTCGCTGGATC--CAGGA-CAAGGAGTCC 212236 Query 46144 ACTTTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGT 46203 ||||||||| |||| |||| ||||| || ||| ||||| |||| || |||||| | Sbjct 212235 ACTTTCGCCCAGCGCTTGGTTGCCTTCGCTGCTGTTGAGGGTATCTTCTTCTCTGGCTCT 212176 Query 46204 TTTGCCGCCATCTTTTACATCAAAACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAAC 46263 || ||| | ||||| | | || | ||| ||||||| || ||||| || ||| Sbjct 212175 TTCGCCTCTATCTTCTGGCTGAAGAAGCGTGGCCTCATGCCTGGTCTGACCTTCTCTAAC 212116 Query 46264 GAGCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCTCTACTATAACACT 46323 |||||||| || || || ||||| ||||| || ||||| || ||||| || | | | Sbjct 212115 GAGCTGATCTCTCGTGATGAGGGTCTGCACACCGACTTCGCTTGTCTG--CTGTT-CTCC 212059 Query 46324 CGCGTGCACGACAAGCTTGCGCCCGACACCGTGCTGAGCATGTTCAAGGAGGCGGTGGCC 46383 | | || || || | | || || || || || || || || || | | Sbjct 212058 CACCTGAACAACCGCCCCTCACCTGAGGTTGTCGAGAAGATCATCGTTGATGCCGTCGAC 211999 Query 46384 ATTGAGAAGGAGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACGCACAG 46443 |||||| ||||||| | |||| ||| || |||| |||||| || || |||||| | || Sbjct 211998 ATTGAGCAGGAGTTCCTGACGGACGCCCTCCCCGTTGCCCTCCTTGGTATGAACTCCAAG 211939 Query 46444 TCAATGTGCGACTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCACCAGCCG 46503 |||||| | ||||||||||| || || ||||| ||||| || ||| | | | Sbjct 211938 CTCATGTGCCAGTACATCGAGTTCGTTGCCGACCGCCTGCTGGTCTCTCTTGGCAACAAG 211879 Query 46504 AAGCATTTTCACGCGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAGGGCAAA 46563 ||| | | |||| || || || || || ||| |||||||||| || | ||||| Sbjct 211878 AAGTACTACAACGCCACAAACCCCTTCGACTTCATGGACAACATCTCGCTCGCTGGCAAG 211819 Query 46564 ACTAATTTTTTCGAAAAGCGCGTCGGCGAGTA 46595 || || || ||||| ||||| ||||| || || Sbjct 211818 ACCAACTTCTTCGAGAAGCGTGTCGGTGACTA 211787 >seq812 Length=913560 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| || || || | || | || |||||||| ||||||||||||||| | Sbjct 528753 CCACCACGCAGGCGGAGGACAAGGTGGAGAGTAGACTCCTTCTGAATGTTGTAATCGGAC 528812 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| || || | |||||| || || |||| | |||||||||||| |||||| Sbjct 528813 AAGGTGCGGCCATCTTCCAACTGCTTACCAGCAAAGATAAGACGCTGCTGGTCGGGAGGG 528872 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || |||||||| || ||| || ||||| | || | ||||| | || |||| Sbjct 528873 ATGCCTTCTTTATCTTGGATCTTGCTCTTGACGTTATCGATGGTATCTGACGATTCGACT 528932 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | |||| || || ||||| ||||| || |||||||||||||| Sbjct 528933 TCCAGAGTAATAGTCTTGCCGGTCAGAGTCTTGACGAAAATCTGCAT 528979 Score = 109 bits (120), Expect = 5e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 131020 CGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAG 131079 ||||| || | || | |||||||||||| || |||||||| ||| | ||||| Sbjct 528993 CGCAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGTGTGCGGCCA 529052 Query 131080 TCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTG 131139 ||||| |||||||| || ||| |||| | ||| |||||||| |||||||| || || || Sbjct 529053 TCCTCAAGCTGCTTTCCAGCGAAGATCAGACGTTGCTGGTCGGGAGGGATACCCTCCTTA 529112 Query 131140 TCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACG 131199 || ||| || ||||| | || | || |||| ||||| | |||| ||| | Sbjct 529113 TCCTGGATCTTGCTCTTGACGTTGTCGATGGTGTCGGAAGACTCAACCTCGAGGGTGATA 529172 Query 131200 GTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || || || || || || || ||||| |||||||| Sbjct 529173 GTCTTTCCAGTAAGGGTCTTCACGAAGATCTGCAT 529207 Score = 105 bits (116), Expect = 6e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || || | ||| ||||| | || | ||| |||||||| || |||||||| || Sbjct 529209 CCTCCACGAAGACGGAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 529268 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| |||||| |||||||| || ||| |||| | |||||||||||| |||||| Sbjct 529269 AGCGTGCGACCGTCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCAGGAGGG 529328 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||||| | || | || || | |||||||| Sbjct 529329 ATACCCTCCTTGTCCTGGATCTTGCTCTTGACGTTGTCGATGGTGTCCGAGGACTCGACC 529388 Query 131188 TCGACGGTAACGGTTTTACCGGT 131210 |||| ||| | ||| || || || Sbjct 529389 TCGAGGGTGATGGTCTTTCCAGT 529411 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||||| || | || | ||| || ||||| || |||||||| ||| | Sbjct 528525 CCACCACGGAGTCGCAGAACCAGGTGCAGGGTAGATTCCTTCTGGATGTTGTAGTCGGAC 528584 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || |||||| |||||||| || || |||| | ||||||||||| |||||| Sbjct 528585 AAGGTACGACCGTCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCAGGAGGG 528644 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| || || ||| | | || | || ||| |||| || | Sbjct 528645 ATACCTTCCTTGTCTTGAATCTTGCTCTTCACGTTGTCAATTGTGTCGCTGGATTCAACC 528704 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | || || || || | ||| || || ||||||||||| Sbjct 528705 TCCAATGTGATAGTCTTGCCAGTCAAAGTCTTAACAAAAATCTGCAT 528751 >seq810 Length=1034423 Score = 111 bits (122), Expect = 1e-19 Identities = 133/181 (73%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104 |||| || |||||||| ||||||| ||||| || || |||||||| || ||| ||| Sbjct 583011 CCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCTTCGAGCTGCTTTCCGGCGAAGA 582952 Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164 | | ||||||||||||||| || || || || ||||| ||| || ||||| | | Sbjct 582951 TCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGT 582892 Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 | | || |||| ||||||| |||| ||||| ||| ||||| || || || || |||| Sbjct 582891 CGATCGTGTCGGACGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 582832 Query 131225 A 131225 | Sbjct 582831 A 582831 >seq578 Length=440600 Score = 100 bits (110), Expect = 3e-16 Identities = 451/714 (63%), Gaps = 18/714 (3%) Strand=Plus/Minus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 || |||||||| ||||| || || | |||||||| | || | ||| || ||| | ||| Sbjct 116869 TTAACGACCTGGAACTCTCCCGCAAGGACACGACGAGAGTAGATGTTCGAAGTGTATGGT 116810 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 || || | ||||| ||||||||| ||| ||| | || ||||||||| || || Sbjct 116809 TCGAAGCATTCGTTGAAGCCCAGGATCTGACTGGTACTGGCCGTGGGCATGGGAGCAACG 116750 Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237 | || ||||| | || ||||| || || |||| || | || ||| ||||| Sbjct 116749 AGCAAGCTGTTGCGGACACCATGCTTGGCAATCTCCGCCTTCAGTGAACTCCAGTCCCAA 116690 Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGGCTG 145297 || ||| || || |||||||||||||||||| | ||||||| | ||| | Sbjct 116689 AGGTCAGTAGGGGTCTTGTCCCACATGTCGTACTGAAGGATGCCCTGAGAGATGGGAGAG 116630 Query 145298 CCTTGAAAGGAACTGTAACTGCCCCAAGTTTTGGCGAGCTCGCAACTCGCCTCCAGAGCG 145357 |||| | | || ||| ||||| ||||| || ||| || || ||| Sbjct 116629 CCTTCATAAGAGGAGTATGTGCCCTGCTCCTTGGCAAGTTCGACGGATGCAGTCAAAGCA 116570 Query 145358 CCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTCGTAC 145417 ||| || || ||||| || || |||||||| || | || || ||| || Sbjct 116569 CCGTGGTAGATGGTCTCAAAGATCTGGATGTTGAGCTGCTTGGCCTCCGGAGAGTCGAAC 116510 Query 145418 GGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGGCCGA 145477 |||| || || | || || || || || || | | || ||| | ||||| || Sbjct 116509 GGCAGACGGAGAGCCAGGAAGGCGTCAGCAAGACCGTTAACACCAACGGCAATGGGGCGG 116450 Query 145478 TGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATATCGATTACGGTCGATAATTTTA 145537 || || ||||||| || | ||| | | || || || ||||||||| || Sbjct 116449 TGGCGCAAGTTGCTCTTCTTGGCCTCCGGAACGGGGTAGTAGTTGATGTCGATAATCTTG 116390 Query 145538 TTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAAAC------ 145591 |||| ||| || || || |||| || | | ||| | ||||||| || Sbjct 116389 TTCAGGTTGCGAACCACAACCTGGGTGACTTCATGCAGTCTGCCAAAGTCGTACTCGCCA 116330 Query 145592 CGAGCCTCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAAACTGCC 145651 ||||| | ||||||| | | | || | || ||||| || ||||| || Sbjct 116329 CGAGCAGCATCAACGA------AAGTGGGCAGAGCAAGAGAGGCCAAGTTGCAAACGGCG 116276 Query 145652 GTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATT---GCTACATTTGATG 145708 ||| |||| | | |||| | | |||||| | ||| | || ||| | ||| Sbjct 116275 ACCTCATCGGGGGCAGTGTACTCGATGATCTCAGTGCAGAGGTTAGAGCTGC---GGATA 116219 Query 145709 GTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATG 145762 || ||||| || | ||| || || ||| |||||||||| |||||||| |||||| Sbjct 116218 GTACCCAGGTTCTTCTGGTTGCTCTTCTTGTTGCACGCATCCTTGTACAGCATG 116165 >seq799 Length=343686 Score = 98.7 bits (108), Expect = 9e-16 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| || ||||| | || | |||||||||||| || |||||||| || Sbjct 28765 CCACCACGCAGGCGGAGCACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAG 28824 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| |||||| |||||||| || ||| |||| | |||||||||||| || ||| Sbjct 28825 AGAGTGCGACCGTCCTCGAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCAGGGGGG 28884 Query 131128 ATTCCTTCTTTGTC 131141 || || || ||||| Sbjct 28885 ATACCCTCCTTGTC 28898 >seq609 Length=32548 Score = 96.9 bits (106), Expect = 3e-15 Identities = 112/151 (74%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || || || | ||| || |||||||||||||||||||| ||| Sbjct 21019 CCACCACGAAGACGGAGAACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCACTC 20960 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || ||| || || || || || ||| | || | ||| || || || |||||| Sbjct 20959 AAGGTACGACCGTCTTCGAGTTGTTTACCGGCGAAAATGAGACGTTGTTGATCAGGAGGG 20900 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGA 131158 || ||||| || || ||| || ||||||| Sbjct 20899 ATACCTTCCTTATCTTGGATCTTTTGCTTGA 20869 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472007826165120