Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017
-02-15] 843 sequences; 47,573,060 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq657 165 8e-36
seq812 131 2e-25
seq810 111 1e-19
seq578 100 3e-16
seq799 98.7 9e-16
seq609 96.9 3e-15
>seq657
Length=446211
Score = 165 bits (182), Expect = 8e-36
Identities = 347/512 (68%), Gaps = 9/512 (2%)
Strand=Plus/Minus
Query 46087 CCGTGCGTGCGCAAGAAAACCGACTGGGCGATGAAGTGGATCAACAGCAGCACCGCG--- 46143
|| ||| | |||||||| |||||||||| || |||||| ||| | || | |
Sbjct 212292 CCCTGCATCCGCAAGAAGGCCGACTGGGCCATTCGCTGGATC--CAGGA-CAAGGAGTCC 212236
Query 46144 ACTTTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGT 46203
||||||||| |||| |||| ||||| || ||| ||||| |||| || |||||| |
Sbjct 212235 ACTTTCGCCCAGCGCTTGGTTGCCTTCGCTGCTGTTGAGGGTATCTTCTTCTCTGGCTCT 212176
Query 46204 TTTGCCGCCATCTTTTACATCAAAACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAAC 46263
|| ||| | ||||| | | || | ||| ||||||| || ||||| || |||
Sbjct 212175 TTCGCCTCTATCTTCTGGCTGAAGAAGCGTGGCCTCATGCCTGGTCTGACCTTCTCTAAC 212116
Query 46264 GAGCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCTCTACTATAACACT 46323
|||||||| || || || ||||| ||||| || ||||| || ||||| || | | |
Sbjct 212115 GAGCTGATCTCTCGTGATGAGGGTCTGCACACCGACTTCGCTTGTCTG--CTGTT-CTCC 212059
Query 46324 CGCGTGCACGACAAGCTTGCGCCCGACACCGTGCTGAGCATGTTCAAGGAGGCGGTGGCC 46383
| | || || || | | || || || || || || || || || | |
Sbjct 212058 CACCTGAACAACCGCCCCTCACCTGAGGTTGTCGAGAAGATCATCGTTGATGCCGTCGAC 211999
Query 46384 ATTGAGAAGGAGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACGCACAG 46443
|||||| ||||||| | |||| ||| || |||| |||||| || || |||||| | ||
Sbjct 211998 ATTGAGCAGGAGTTCCTGACGGACGCCCTCCCCGTTGCCCTCCTTGGTATGAACTCCAAG 211939
Query 46444 TCAATGTGCGACTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCACCAGCCG 46503
|||||| | ||||||||||| || || ||||| ||||| || ||| | | |
Sbjct 211938 CTCATGTGCCAGTACATCGAGTTCGTTGCCGACCGCCTGCTGGTCTCTCTTGGCAACAAG 211879
Query 46504 AAGCATTTTCACGCGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAGGGCAAA 46563
||| | | |||| || || || || || ||| |||||||||| || | |||||
Sbjct 211878 AAGTACTACAACGCCACAAACCCCTTCGACTTCATGGACAACATCTCGCTCGCTGGCAAG 211819
Query 46564 ACTAATTTTTTCGAAAAGCGCGTCGGCGAGTA 46595
|| || || ||||| ||||| ||||| || ||
Sbjct 211818 ACCAACTTCTTCGAGAAGCGTGTCGGTGACTA 211787
>seq812
Length=913560
Score = 131 bits (144), Expect = 2e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| |||| || || || | || | || |||||||| ||||||||||||||| |
Sbjct 528753 CCACCACGCAGGCGGAGGACAAGGTGGAGAGTAGACTCCTTCTGAATGTTGTAATCGGAC 528812
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| || || | |||||| || || |||| | |||||||||||| ||||||
Sbjct 528813 AAGGTGCGGCCATCTTCCAACTGCTTACCAGCAAAGATAAGACGCTGCTGGTCGGGAGGG 528872
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| |||||||| || ||| || ||||| | || | ||||| | || ||||
Sbjct 528873 ATGCCTTCTTTATCTTGGATCTTGCTCTTGACGTTATCGATGGTATCTGACGATTCGACT 528932
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | |||| || || ||||| ||||| || ||||||||||||||
Sbjct 528933 TCCAGAGTAATAGTCTTGCCGGTCAGAGTCTTGACGAAAATCTGCAT 528979
Score = 109 bits (120), Expect = 5e-19
Identities = 153/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 131020 CGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAG 131079
||||| || | || | |||||||||||| || |||||||| ||| | |||||
Sbjct 528993 CGCAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGTGTGCGGCCA 529052
Query 131080 TCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTG 131139
||||| |||||||| || ||| |||| | ||| |||||||| |||||||| || || ||
Sbjct 529053 TCCTCAAGCTGCTTTCCAGCGAAGATCAGACGTTGCTGGTCGGGAGGGATACCCTCCTTA 529112
Query 131140 TCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACG 131199
|| ||| || ||||| | || | || |||| ||||| | |||| ||| |
Sbjct 529113 TCCTGGATCTTGCTCTTGACGTTGTCGATGGTGTCGGAAGACTCAACCTCGAGGGTGATA 529172
Query 131200 GTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| || || || || || || ||||| ||||||||
Sbjct 529173 GTCTTTCCAGTAAGGGTCTTCACGAAGATCTGCAT 529207
Score = 105 bits (116), Expect = 6e-18
Identities = 145/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|| || || | ||| ||||| | || | ||| |||||||| || |||||||| ||
Sbjct 529209 CCTCCACGAAGACGGAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 529268
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| |||||| |||||||| || ||| |||| | |||||||||||| ||||||
Sbjct 529269 AGCGTGCGACCGTCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCAGGAGGG 529328
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| ||| || ||||| | || | || || | ||||||||
Sbjct 529329 ATACCCTCCTTGTCCTGGATCTTGCTCTTGACGTTGTCGATGGTGTCCGAGGACTCGACC 529388
Query 131188 TCGACGGTAACGGTTTTACCGGT 131210
|||| ||| | ||| || || ||
Sbjct 529389 TCGAGGGTGATGGTCTTTCCAGT 529411
Score = 98.7 bits (108), Expect = 9e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||||| || | || | ||| || ||||| || |||||||| ||| |
Sbjct 528525 CCACCACGGAGTCGCAGAACCAGGTGCAGGGTAGATTCCTTCTGGATGTTGTAGTCGGAC 528584
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||| || |||||| |||||||| || || |||| | ||||||||||| ||||||
Sbjct 528585 AAGGTACGACCGTCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCAGGAGGG 528644
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| ||||| ||||| || || ||| | | || | || ||| |||| || |
Sbjct 528645 ATACCTTCCTTGTCTTGAATCTTGCTCTTCACGTTGTCAATTGTGTCGCTGGATTCAACC 528704
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | || | || || || || | ||| || || |||||||||||
Sbjct 528705 TCCAATGTGATAGTCTTGCCAGTCAAAGTCTTAACAAAAATCTGCAT 528751
>seq810
Length=1034423
Score = 111 bits (122), Expect = 1e-19
Identities = 133/181 (73%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104
|||| || |||||||| ||||||| ||||| || || |||||||| || ||| |||
Sbjct 583011 CCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCTTCGAGCTGCTTTCCGGCGAAGA 582952
Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164
| | ||||||||||||||| || || || || ||||| ||| || ||||| | |
Sbjct 582951 TCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGT 582892
Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224
| | || |||| ||||||| |||| ||||| ||| ||||| || || || || ||||
Sbjct 582891 CGATCGTGTCGGACGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 582832
Query 131225 A 131225
|
Sbjct 582831 A 582831
>seq578
Length=440600
Score = 100 bits (110), Expect = 3e-16
Identities = 451/714 (63%), Gaps = 18/714 (3%)
Strand=Plus/Minus
Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117
|| |||||||| ||||| || || | |||||||| | || | ||| || ||| | |||
Sbjct 116869 TTAACGACCTGGAACTCTCCCGCAAGGACACGACGAGAGTAGATGTTCGAAGTGTATGGT 116810
Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177
|| || | ||||| ||||||||| ||| ||| | || ||||||||| || ||
Sbjct 116809 TCGAAGCATTCGTTGAAGCCCAGGATCTGACTGGTACTGGCCGTGGGCATGGGAGCAACG 116750
Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237
| || ||||| | || ||||| || || |||| || | || ||| |||||
Sbjct 116749 AGCAAGCTGTTGCGGACACCATGCTTGGCAATCTCCGCCTTCAGTGAACTCCAGTCCCAA 116690
Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGGCTG 145297
|| ||| || || |||||||||||||||||| | ||||||| | ||| |
Sbjct 116689 AGGTCAGTAGGGGTCTTGTCCCACATGTCGTACTGAAGGATGCCCTGAGAGATGGGAGAG 116630
Query 145298 CCTTGAAAGGAACTGTAACTGCCCCAAGTTTTGGCGAGCTCGCAACTCGCCTCCAGAGCG 145357
|||| | | || ||| ||||| ||||| || ||| || || |||
Sbjct 116629 CCTTCATAAGAGGAGTATGTGCCCTGCTCCTTGGCAAGTTCGACGGATGCAGTCAAAGCA 116570
Query 145358 CCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTCGTAC 145417
||| || || ||||| || || |||||||| || | || || ||| ||
Sbjct 116569 CCGTGGTAGATGGTCTCAAAGATCTGGATGTTGAGCTGCTTGGCCTCCGGAGAGTCGAAC 116510
Query 145418 GGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGGCCGA 145477
|||| || || | || || || || || || | | || ||| | ||||| ||
Sbjct 116509 GGCAGACGGAGAGCCAGGAAGGCGTCAGCAAGACCGTTAACACCAACGGCAATGGGGCGG 116450
Query 145478 TGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATATCGATTACGGTCGATAATTTTA 145537
|| || ||||||| || | ||| | | || || || ||||||||| ||
Sbjct 116449 TGGCGCAAGTTGCTCTTCTTGGCCTCCGGAACGGGGTAGTAGTTGATGTCGATAATCTTG 116390
Query 145538 TTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAAAC------ 145591
|||| ||| || || || |||| || | | ||| | ||||||| ||
Sbjct 116389 TTCAGGTTGCGAACCACAACCTGGGTGACTTCATGCAGTCTGCCAAAGTCGTACTCGCCA 116330
Query 145592 CGAGCCTCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAAACTGCC 145651
||||| | ||||||| | | | || | || ||||| || ||||| ||
Sbjct 116329 CGAGCAGCATCAACGA------AAGTGGGCAGAGCAAGAGAGGCCAAGTTGCAAACGGCG 116276
Query 145652 GTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATT---GCTACATTTGATG 145708
||| |||| | | |||| | | |||||| | ||| | || ||| | |||
Sbjct 116275 ACCTCATCGGGGGCAGTGTACTCGATGATCTCAGTGCAGAGGTTAGAGCTGC---GGATA 116219
Query 145709 GTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATG 145762
|| ||||| || | ||| || || ||| |||||||||| |||||||| ||||||
Sbjct 116218 GTACCCAGGTTCTTCTGGTTGCTCTTCTTGTTGCACGCATCCTTGTACAGCATG 116165
>seq799
Length=343686
Score = 98.7 bits (108), Expect = 9e-16
Identities = 102/134 (76%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| |||| || ||||| | || | |||||||||||| || |||||||| ||
Sbjct 28765 CCACCACGCAGGCGGAGCACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAG 28824
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| |||||| |||||||| || ||| |||| | |||||||||||| || |||
Sbjct 28825 AGAGTGCGACCGTCCTCGAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCAGGGGGG 28884
Query 131128 ATTCCTTCTTTGTC 131141
|| || || |||||
Sbjct 28885 ATACCCTCCTTGTC 28898
>seq609
Length=32548
Score = 96.9 bits (106), Expect = 3e-15
Identities = 112/151 (74%), Gaps = 0/151 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||| || || || || | ||| || |||||||||||||||||||| |||
Sbjct 21019 CCACCACGAAGACGGAGAACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCACTC 20960
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||| || ||| || || || || || ||| | || | ||| || || || ||||||
Sbjct 20959 AAGGTACGACCGTCTTCGAGTTGTTTACCGGCGAAAATGAGACGTTGTTGATCAGGAGGG 20900
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGA 131158
|| ||||| || || ||| || |||||||
Sbjct 20899 ATACCTTCCTTATCTTGGATCTTTTGCTTGA 20869
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 472007826165120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |