Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017 -02-15] 843 sequences; 47,573,060 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq812 107 2e-18 >seq812 Length=913560 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || || | ||| |||| ||||| || || ||||| || ||||||||||||| | Sbjct 528525 CCACCACGGAGTCGCAGAACCAGGTGCAGGGTAGATTCCTTCTGGATGTTGTAGTCGGAC 528584 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| ||||||||| || || || ||| | || || ||||| ||||| ||| Sbjct 528585 AAGGTACGACCGTCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCAGGAGGG 528644 Query 16829 ACGCCCTCTTTGTCGGCAAT-TTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGT 16887 | || || ||||| ||| ||||| |||||| | | | | ||||||| || || Sbjct 528645 ATACCTTCCTTGTCTTGAATCTTGCT-CTTCACGTTGTCAATTGTGTCGCTGGATTCAAC 528703 Query 16888 TTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| ||||| || || || |||| || || |||||||||||||| Sbjct 528704 CTCCAATGTGATAGTCTTGCCAGTCAAAGTCTTAACAAAAATCTGCAT 528751 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405083838100570