Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017
-02-15] 843 sequences; 47,573,060 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq744 253 3e-62
seq578 141 1e-28
seq723 111 2e-19
seq657 98.7 1e-15
>seq744
Length=38458
Score = 253 bits (280), Expect = 3e-62
Identities = 568/846 (67%), Gaps = 9/846 (1%)
Strand=Plus/Plus
Query 32372 TTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTTTC 32431
||| || ||| ||||| ||||| || || || || || |||| | || || | ||
Sbjct 30544 TTGATAGTCAGAGACACGCTTTTCAAAGAAGTTGGTCTTGCCTTGAAGAGAGATCATGTC 30603
Query 32432 CATGAAATCGAATGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAA 32491
||| || || |||||||||||| | | ||||| || | |||||| | || || |
Sbjct 30604 CATAAAGTCAAATGGATTGGTAGCCATGTAAATCTTGTCAAATCCAAGAGCAACCATGAG 30663
Query 32492 TCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTT 32551
| ||| || || ||||| || ||| ||||| || ||||||| || || ||
Sbjct 30664 ACGATCAGCAACGAATTCGATGTATTGGCACATCAAAGCAGAATTCATGCCGATGAGAGC 30723
Query 32552 AACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAGA 32611
||| |||||||| | || | |||||| |||||||| ||| || || || |||
Sbjct 30724 AACGGGAAGAGCATCCGTCAAAAATTCCTGTTCAATGCTGACAGCTTCCAAGATGATATC 30783
Query 32612 TCTTACTGTTTCTTCACTCGGTGGAT-ACAATAAATGTTTAAACATCAAACATGCGAAAT 32670
| || ||||| || || | | || | | ||| |||| | | ||| || || |
Sbjct 30784 CTTGACGCGTTCTTGGCTAGGACGCTTACGA-AGATGGGTAAATAAAAGACAAGCAAAGT 30842
Query 32671 CGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTA 32730
| || || || || || | || || ||||| ||| || || | || ||||| |
Sbjct 30843 CAGTATGAAGGCCTTCATCACGACAGATCAATTCATTGCTGAATGTCAAACCAGGCATCA 30902
Query 32731 GGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTA 32790
||||| || || |||||||| ||||| ||||| || ||||| |||||||| ||||| |
Sbjct 30903 AACCACGTTTCTTGAGCCAAAAAATGGAAGCAAAGGAACCAGAGAAGAAAATACCTTCGA 30962
Query 32791 CTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCATGTATCCACTTTTGAG 32850
| || |||||||||| ||| | ||| || || || | |||||||| |
Sbjct 30963 CAGCAGCAAAGGCAACAAGACGCTCAGCAAAAGAACCGTTAGAGGAAATCCACTTGAAGG 31022
Query 32851 CCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGtttt 32910
||||||| ||||| |||| | |||||| || || || |||||| |||||| | ||
Sbjct 31023 CCCAATCAGCCTTTCTTTTGATACAAGGGATAGTGTCAATAGCAGAAAAGAGCATTTCTT 31082
Query 32911 tttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGT 32970
| || | ||||||| | ||| || |||||||||||||| || |||| | ||||| |
Sbjct 31083 TCTCTTGGTTATCTTTGATATAAGTGTCAATCAAAAGACTGTAAGTTTCTGCGTGAATAT 31142
Query 32971 TTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTACTTCTGTAC 33030
||||||| |||||||| || ||||| ||| |||| || | ||||| ||||| ||
Sbjct 31143 TTTCAATCATGATTTGAAAGCCATAGAAACATTTAGCTTCAGGAATCTTGACTTCATCAC 31202
Query 33031 AAAATCGTTCTG--CTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAA 33088
|||| ||| || | || |||||||| || || || || | ||||| || || ||
Sbjct 31203 AAAA--GTTTTGAACCAAGTTTTCATTAACAATGCCATCTGAACCAGCAAAGAAGGCTAA 31260
Query 33089 TACATGTTTTATAAAATATTTTTCGTCT--GGTGTTAGT-TTATTCCAATCATTGATATC 33145
|| | ||||| | ||||| | ||| | | || | |||||||| | ||
Sbjct 31261 GACGCGAGAGATAAAGAAGCGTTCGTTTTCGGTCATCTTGTTTTCCCAATCATGAAGGTC 31320
Query 33146 TTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATT 33205
|| | ||| | |||||| |||||||||| || || || || || ||||| | |
Sbjct 31321 CTTGCTCAAATCGATTTCTTCAGCTGTCCAAAAGGAAGCTTCAGCTTTCTTATAGAATTG 31380
Query 33206 CCAGAT 33211
||||||
Sbjct 31381 CCAGAT 31386
>seq578
Length=440600
Score = 141 bits (156), Expect = 1e-28
Identities = 437/667 (66%), Gaps = 12/667 (2%)
Strand=Plus/Minus
Query 63052 CCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-A 63110
||| || |||| | || || || ||||| |||||||| ||| |||| || || ||| |
Sbjct 115942 CCAGTCACCGTTAGACTCAACACGCTTCATGAAGAGATCGGGAGTCCAGAGGGC-ATAGA 115884
Query 63111 ATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCA 63170
| || || | | ||| || || || || ||||| ||| || | |||| | |
Sbjct 115883 AGAGGTCACGTGCTCTGACCTCTTCCTTACCGTGGTTCTTGCGAAGGTCCAAGAACTCAA 115824
Query 63171 TAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTC 63230
|| || || ||||| || |||| ||| || || | | | ||||| || ||||| || |
Sbjct 115823 AGATGTCGGAGTGCCAGGGCTCCAGGTAGATAGCGAAAGCACCAGGGCGCTTGTTCCCGC 115764
Query 63231 CCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGG 63290
|||| || | |||||| || ||||| || | |||| | ||| || | || || ||||
Sbjct 115763 CCTGGTCAACGTATCTTGCAGTGTTGTTGAACACTCGAAGCATAGGGACAAGCCCGTTGG 115704
Query 63291 ATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAA--TTGATAG 63348
| || || || || || ||| || || | ||||| ||| | |||| |
Sbjct 115703 AAGTTCCGTTAGTACCACCGATGTAAGAACCTGTAGCACGGATACGGTGGACGTTGA--G 115646
Query 63349 ACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCC 63408
||| || || || || | || ||||| | || || || || || |||||||| ||
Sbjct 115645 ACCAATACCACCCGCAGTCTTGGAGATCATGGCACAAGTCTTCAAGGTGTCATAGATACC 115586
Query 63409 CTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGT 63468
||| || || || ||| |||| | | || || ||| | || || | || |||
Sbjct 115585 CTCAATGCTGTCCTCCTTCATATCGATAAGGAAGCAGGAGGCCAGCTGCGGCTGAGGAGT 115526
Query 63469 TCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTA 63528
|| || || || | || || || |||||||| || |||| | || | ||||||||
Sbjct 115525 ACCGGCGTTGAACAGAGTCGGCGAGGCGTGAGTGAAGTATTTCTGGGACATCAGATTGTA 115466
Query 63529 CGTCTCAATAGCTGAGTCTATATCC-CATTGATGAATTCCTACTGCGACACGCATTAACA 63587
||||| ||| | || | || || | || ||||| || || |||||||| | ||
Sbjct 115465 GGTCTCGATAACCTTCTCGAGGTCATCACCG-TGGATTCCGACCGCAACACGCATAATCA 115407
Query 63588 TGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAG 63647
|||||||||| | ||| | | ||| || || | || || ||| ||||| ||
Sbjct 115406 TGTGCTGAGGACGCTCAGCAACCTTTCCATTGATGCGGAGCAGATACGATCGTTCCAGAG 115347
Query 63648 TTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAG 63705
| || || || || || | ||| ||||| || || || |||| |||| | ||||| |
Sbjct 115346 TCTTGAATCCGAAGTATTGGTAGTTGAAA--TCACGGTCATAAACAATAGCGGAGTTCAA 115289
Query 63706 TTTATCC 63712
|| ||||
Sbjct 115288 TTCATCC 115282
>seq723
Length=18298
Score = 111 bits (122), Expect = 2e-19
Identities = 278/421 (66%), Gaps = 5/421 (1%)
Strand=Plus/Plus
Query 61888 ATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTT 61947
||||||||| || || |||| || |||| | ||||| |||||| || | |||
Sbjct 4430 ATAGTACATGCCAGTCTTTAATCCCTTCTTCCAGGCATAAAAGTGCATAGAGGTCAATTT 4489
Query 61948 GGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCC 62007
| | | | || || || || | ||||||||||||| ||| ||||| || |||||
Sbjct 4490 GCCAAAGTTTGGTTCGGCAGTAAACAAATTCATAGATTGAGATTGGTCGATAAAAGCTCC 4549
Query 62008 CCTGTCTGCAGCCATTTTTATAATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAAC 62067
|| || || ||||| | ||||| || |||||| ||| ||||| | ||||| || |
Sbjct 4550 TCTATCAGCGGCCATGTCAATAATAGTTCTTTGTGAAATCTCCCATACTGTTTTGTATAG 4609
Query 62068 TCGCTTAATATCTTCTGGAAGGTTTGTATTCTGAATGGAT----CCACCATCTGCCATAA 62123
|| | ||| || |||| | | | | | ||||| || |||| || || |
Sbjct 4610 CTTTTTGAGATCATCAGGAACGCCGGGAATACG-TTGGATACTACCGCCATGAGCAATCA 4668
Query 62124 TCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCG 62183
|| | |||||||| | |||||||||||| | ||| | | | | | | ||||
Sbjct 4669 TCATGTTCTTGATGTTATCATTCCATAAATCGAGCTCAATGAGGTCATTCAATAAATGCT 4728
Query 62184 GATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACG 62243
| || |||| ||| ||||| ||| || | || || |||||||| || || || |
Sbjct 4729 GGTTGACTATTTGGAATTCACCACTTTGAACACGACGCGTATAAATATTGCTAGTGTAAG 4788
Query 62244 GTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCA 62303
| || | | || ||||| ||||| |||||| ||| ||||| |||||||| || |
Sbjct 4789 GCTCGAAGCATTCGTTATTGCCCAATATTTGACTAGTGCTAGCAGTAGGCATAGGAGCAA 4848
Query 62304 C 62304
|
Sbjct 4849 C 4849
>seq657
Length=446211
Score = 98.7 bits (108), Expect = 1e-15
Identities = 114/154 (74%), Gaps = 0/154 (0%)
Strand=Plus/Plus
Query 32652 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 32711
|||| || ||| ||||| ||| ||| |||||||| || | | || | ||||| ||
Sbjct 212063 AACAGCAGACAAGCGAAGTCGGTGTGCAGACCCTCATCACGAGAGATCAGCTCGTTAGAG 212122
Query 32712 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 32771
|| || || || ||||| ||||||||||| || ||||| || || || || || || |||
Sbjct 212123 AAGGTCAGACCAGGCATGAGGCCACGCTTCTTCAGCCAGAAGATAGAGGCGAAAGAGCCA 212182
Query 32772 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAA 32805
|| ||||| || || || || || || |||||||
Sbjct 212183 GAGAAGAAGATACCCTCAACAGCAGCGAAGGCAA 212216
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633625323102800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |