Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017
-02-15] 843 sequences; 47,573,060 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq744 214 2e-50
>seq744
Length=38458
Score = 214 bits (236), Expect = 2e-50
Identities = 597/908 (66%), Gaps = 30/908 (3%)
Strand=Plus/Plus
Query 92742 TTAGAAATCTGCATCTAGTGTAAATACATTGTCAAGTGGATTCTTATTCATAACACCACA 92801
||||||||| ||||||| ||||| || ||| || | ||| ||||| ||||||
Sbjct 30481 TTAGAAATCAGCATCTAAGGTAAAGGTCTTTTCAGCAGGCTGCTTGTTCATGACACCAGC 30540
Query 92802 TTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTCCAAAGATATCGA 92861
||| || || || ||||||||||| || ||||| |||| | ||| |||
Sbjct 30541 ACGTTGATAGTCAGAGACACGCTTTTCAAAGAAGTTGGTCTTGCCTTGAAGAGAGATCAT 30600
Query 92862 ATTCACTA-GTGAT-TGGATTCTTGGCGTTATAATACTTTTCA---CC--GATCAACTCG 92914
| || | || | |||||| | || | ||| ||| ||| || || ||||
Sbjct 30601 GTCCATAAAGTCAAATGGATTGGTAGCCATGTAAATCTTGTCAAATCCAAGAGCAAC--- 30657
Query 92915 TACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCT 92974
|| | | |||||| || ||||| ||||| || |||||||| || ||||||| ||
Sbjct 30658 --CATGAGACGATCAGCAACGAATTCGATGTATTGGCACATCAAAGCAGAATTCATGCCG 30715
Query 92975 AGAAGACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTC 93034
| ||| || || ||||| || ||||| || || | || || || |||||
Sbjct 30716 ATGAGAGCAACGGGAAGAGCATCCGTCAAAAATTCCTGTTCAATGCTGACAGCTTCCAAG 30775
Query 93035 AAGATTTCTATTACTCTACTATTTGGTGGTTTTTGTACGACATAATTGTACATTAAGCAC 93094
| ||| || | || | | || | | | ||||| | | ||| || || ||
Sbjct 30776 ATGATATCCTTGACGCGT-TCTTGGCTAGGACGCTTACGA-AGATGGGTAAATAAAAGAC 30833
Query 93095 --GCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAAC 93152
|||||||| ||||| | ||||| || || | ||||| |||||||||||||| ||||
Sbjct 30834 AAGCAAAGTCAGTATGAAGGCCTTCATCACGACAGATCAATTCATTGCTGAATGTCAAAC 30893
Query 93153 CTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTA 93212
| || | || || ||||||||||||||||| || |||||||| |||||| || || |
Sbjct 30894 CAGGCATCAAACCACGTTTCTTGAGCCAAAAAATGGAAGCAAAGGAACCAGAGAAGAAAA 30953
Query 93213 TACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCTGA 93272
||||||| || || ||||| || |||| ||| || |||||| || ||| | |
Sbjct 30954 TACCTTCGACAGCAGCAAAGGCAACAAGACGCTCAGCAAAAGAACCG---TTAGAGGAAA 31010
Query 93273 TCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTAA 93332
|||| || || |||||||| || ||| | || |||||||| | || || ||||| ||
Sbjct 31011 TCCACTTGAAGGCCCAATCAGCCTTTCTTTTGATACAAGGGATAGTGTCAATAGCAGAAA 31070
Query 93333 ATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACATTT 93392
| || ||| ||| | |||| || || || || || || ||| || |||
Sbjct 31071 AGAGCATTTCTTTCTCTTGGTTATCTTTGATATAAGTGTCAATCAAAAGACTGTAAGTTT 31130
Query 93393 CAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCT 93452
| | || | ||| || || ||||| || || ||||||||| ||||||| | ||||
Sbjct 31131 CTGCGTGAATATTTTCAATCATGATTTGAAAGCCATAGAAACATTTAGCTTCAGGAATCT 31190
Query 93453 GCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCaa 93512
||||| | | |||| | | || | |||||||| || || ||||| || | ||||
Sbjct 31191 TGACTTCATCACAAAAGTTTTGAACCAAGTTTTCATTAACAATGCCATCTGAACCAGCAA 31250
Query 93513 aaaaaGCCAATATATGCTTTATAAA-------ATGTTTCTCATCATCTTTAAGCTTATCC 93565
| || || || | | ||||| |||| ||||||| || |||
Sbjct 31251 AGAAGGCTAAGACGCGAGAGATAAAGAAGCGTTCGTTTTCGGTCATCTT----GTTTTCC 31306
Query 93566 CAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCT 93625
||||| || || || | ||||| |||||| | |||||||| || ||||| |||
Sbjct 31307 CAATCATGAAGGTCCTTGCTCAAATCGATTTCTTCAGCTGTCCAAAAGGAAGCTTCAGCT 31366
Query 93626 TTTTTGTA 93633
|| || ||
Sbjct 31367 TTCTTATA 31374
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556854932079320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |