Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017
-02-15] 843 sequences; 47,573,060 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq812 122 7e-23
seq609 105 6e-18
>seq812
Length=913560
Score = 122 bits (134), Expect = 7e-23
Identities = 145/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| ||||| || || ||| | ||||| || || | ||||| ||||| ||| | |
Sbjct 528979 ATGCAGATTTTCGTCAAGACTCTGACCGGCAAGACTATTACTCTGGAAGTCGAATCGTCA 528920
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|||||| | || | |||| || || ||||| || || || || || ||||| ||
Sbjct 528919 GATACCATCGATAACGTCAAGAGCAAGATCCAAGATAAAGAAGGCATCCCTCCCGACCAG 528860
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| |||||||| ||||| || || ||||| || ||| ||||||| | ||||||||||||
Sbjct 528859 CAGCGTCTTATCTTTGCTGGTAAGCAGTTGGAAGATGGCCGCACCTTGTCCGATTACAAC 528800
Query 22399 ATTCAAAAAGAATCCAC 22415
||||| || || || ||
Sbjct 528799 ATTCAGAAGGAGTCTAC 528783
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| ||||||||||| ||||| || || || || |||| | || || ||| ||| |
Sbjct 528751 ATGCAGATTTTTGTTAAGACTTTGACTGGCAAGACTATCACATTGGAGGTTGAATCCAGC 528692
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| | | || || |||||||||||||| ||||| || || || ||
Sbjct 528691 GACACAATTGACAACGTGAAGAGCAAGATTCAAGACAAGGAAGGTATCCCTCCTGACCAG 528632
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| || || || ||||| || || ||| | ||||| || ||| | ||||| ||||||
Sbjct 528631 CAGCGCCTGATCTTTGCTGGTAAGCAGCTGGAGGACGGTCGTACCTTGTCCGACTACAAC 528572
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445
|| || || ||||| ||| | || | ||| ||||| | || || ||
Sbjct 528571 ATCCAGAAGGAATCTACCCTGCACCTGGTTCTGCGACTCCGTGGTGG 528525
Score = 105 bits (116), Expect = 6e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || || || | || || || || |||| || || || || | ||
Sbjct 529207 ATGCAGATCTTCGTGAAGACCCTTACTGGAAAGACTATCACCCTCGAGGTTGAGTCTTCC 529148
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | ||| | |||| || || || || ||||||||||| || ||||| ||
Sbjct 529147 GACACCATCGACAACGTCAAGAGCAAGATCCAGGATAAGGAGGGTATCCCTCCCGACCAG 529088
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|||||||| || || || || || ||| | |||||| |||||| ||||||| ||||||
Sbjct 529087 CAACGTCTGATCTTCGCTGGAAAGCAGCTTGAGGATGGCCGCACACTCTCCGACTACAAC 529028
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| || || || || ||| | || | || |||| | || ||||||
Sbjct 529027 ATCCAGAAGGAGTCGACCCTTCACCTCGTCCTGCGCCTCCGTGGAGGT 528980
>seq609
Length=32548
Score = 105 bits (116), Expect = 6e-18
Identities = 126/171 (74%), Gaps = 0/171 (0%)
Strand=Plus/Plus
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | ||| || |||| ||||| || ||||| ||||| ||||| || || ||||||
Sbjct 20853 GACACCATTGACAATGTCAAGCAAAAGATCCAAGATAAGGAAGGTATCCCTCCTGATCAA 20912
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|||||||| || || ||||| ||||| | || || || ||| | |||||||||
Sbjct 20913 CAACGTCTCATTTTCGCCGGTAAACAACTCGAAGACGGTCGTACCTTGAGTGATTACAAC 20972
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGTTTT 22449
|||||||| ||||| ||| | || || ||| | || | || || ||| ||
Sbjct 20973 ATTCAAAAGGAATCTACCCTTCACTTGGTTCTCCGTCTTCGTGGTGGTATT 21023
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419723687688295
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |