Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017 -02-15] 843 sequences; 47,573,060 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq553 268 2e-66 seq141 174 3e-38 seq657 105 1e-17 >seq553 Length=41262 Score = 268 bits (296), Expect = 2e-66 Identities = 692/1037 (67%), Gaps = 43/1037 (4%) Strand=Plus/Plus Query 279344 AGGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAA 279403 |||||| ||||| ||| ||||||| ||||| || || ||||||| ||||| |||| || Sbjct 39667 AGGTGAAGATCTTTGTAACTGTGAATTCTCTCTTGCTTATGGTGCCAAGATCTTGCTTAA 39726 Query 279404 CTCTACC-CGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAG 279462 | |||| | | || | ||||||||||| || ||||||||| ||| ||||||| Sbjct 39727 CCGTACCTCTCTTCGTC-TCAAGCGTGGCCGTCGTTATGGTCTCTGTGGTGCCAATGGTT 39785 Query 279463 CGGGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAA-C 279521 |||||| ||||| ||||| |||||||| |||| ||| | ||||| || ||| | Sbjct 39786 GTGGTAAGTCTACTCTCATGCGTGCCATTGCCAACGAACAGGTCGAAGGCTTCCCTCCTC 39845 Query 279522 GCATCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTCCTCTCTCTCGGATAGC 279581 || ||||| | | ||| || || || || ||||||||||| || | |||| Sbjct 39846 GC-TCTGAACTCAAGACTGTCTACGTCGAACACGACATCGATGGTTCCGAAGCTGATACT 39904 Query 279582 ACTGTGTTCGACTT---CCTAACGTCTGACAATCAGGTTATGGAAATCAGCTCTCCTGAG 279638 || || | ||||| ||| | || || |||| || | || | ||||| Sbjct 39905 CCTTTGGTTGACTTTATCCTTGCTTCCGA-----AGGTGTTGAGACCAAGGAC-CCTGAA 39958 Query 279639 GAAATCATCCAGAAACTGGAGGCCAATGGTTTTGATGAAAGAATGCGTA---ATCTGCCA 279695 ||| | | ||| || || |||| || |||| |||| || | || | Sbjct 39959 GAAGTTCGCAAGATCCTCTTGGAATATGGCTTCTCTGAACAAATGGTTACCAAGATGGCT 40018 Query 279696 GTAGGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTG 279755 | || || || |||||||||||||||||||| || || | || || || | || Sbjct 40019 ATTGGCGAACTCTCTGGTGGTTGGAAGATGAAGCTTGCTCTTGCCCGTGCTATGTTGATG 40078 Query 279756 CGTGCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCC 279815 ||| ||| |||| || | || || || ||||| ||| |||| |||||| ||| Sbjct 40079 AATGCTGATATCCTCTTGTTGGACGAACCTACCAATCACTTGGATGTTGTCAACGTTGCC 40138 Query 279816 TGGCTAGTGTCCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCACGAC 279875 ||||| | | |||||| || |||||| |||| | || |||||||||| |||||| Sbjct 40139 TGGCTGGAGAACTACCTTCTTGGTTTGAAGACTGTTACCTCTATCATTGTCTCCCACGAC 40198 Query 279876 TCTGGCTTCCTAGATGCCGTGTGCTCTGCCATCATTCACTATGAGCAAAATCTGAAGCTC 279935 ||||| ||| | ||| || || || | |||||||||||| || | || |||||| Sbjct 40199 TCTGGTTTCTTGGATCATGTCTGTTCCGACATCATTCACTACGAACCCAACTATAAGCTC 40258 Query 279936 TCCAAGC---ACATCGGCAACCTGTCTGCTTTCGTGGCAAAGCGCCCTGAGGCGGCCGCC 279992 |||| ||| || ||| |||| | ||||| ||| |||| || ||| | Sbjct 40259 ---AAGCGCTACAAGGGTAACTTGTCCGAATTCGTAAAGAAGGTCCCTCGTGCTGCCTCT 40315 Query 279993 TACTATGACCTGAAGG--ACGCCACCGCCAAGTGGGAATTCCCTGAGCCAGGGTTTCTGG 280050 ||||| | || | | || | | ||||| ||||||||||| || || ||| Sbjct 40316 TACTACTCCTTGGAAGCTACTCAAAT--CAAGTTCTCTTTCCCTGAGCCTGGTTTCTTGG 40373 Query 280051 AGGGCATCACATCAAAGGATCGCGCAATCATGAAGCTCCGTGGCGTCTCCTTTGCTTATC 280110 | || |||| | ||||| || |||||| ||||| | ||| ||| |||| Sbjct 40374 AAGGTATCAAGACTAAGGAACGTGCAATCTTGAAGATGAAGAACGTTGACTTCCAGTATC 40433 Query 280111 CCAAT---GGCCCCAA-CATCTTCAGCAGTGTCAACTC---GCAGGTTTCTATGAACTCA 280163 | | | || ||| || || | || || ||| ||| |||| | ||| Sbjct 40434 CTGGTTCTGACCGCAAGCAACTG----ATTGACATCTCCATGCAATGTTCTCTTGCCTCC 40489 Query 280164 CGGATTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACT 280223 || ||| |||||||| ||||| ||||| |||||||||||| | ||||| | ||||| Sbjct 40490 CGTGTTGCCGTCATTGGTCCCAACGGTGCTGGTAAGTCTACCTTGATCAAGTTGTTGACT 40549 Query 280224 GGCGAGACCCAGGCCACTGAGG--GGT-CCGTTTGGAAGCATCCCAACATGCGGATGGCT 280280 || || | | || || |||| ||| | || |||| ||||| ||| |||| || || Sbjct 40550 GGTGAAATCGAGTCC---GAGGTTGGTACTGTCTGGAGACATCCTAACTTGCGCATTGCC 40606 Query 280281 TACGTCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAA 280340 || |||||||| || ||||||||||||||||| ||| |||||| || |||||| || Sbjct 40607 TATGTCGCTCAACATGCTTTCCACCACATCGAACGTCACTTGGACAAAACCCCTAACGAA 40666 Query 280341 TACATTCAGTGGCGCTA 280357 ||||| || ||||| || Sbjct 40667 TACATCCAATGGCGTTA 40683 Score = 116 bits (128), Expect = 8e-21 Identities = 178/251 (71%), Gaps = 2/251 (1%) Strand=Plus/Plus Query 280638 CCTCTGACTGCCAAGAATGTTGAGGACCATATGACCAAGCTGGGTCTGGACCCCGAGTTT 280697 ||| ||||||||||| | | || | || || | | | ||||| || ||||| || Sbjct 40973 CCTTTGACTGCCAAGGAAATCGAAAAGCACTTGGCTGAAGTTGGTCTTGAACCCGAATTC 41032 Query 280698 ACAACTCACTCTCGCATTCGCGGTCTTTCTGGAGGCCAGAAGGTCAAACTTGTCATCGGA 280757 | ||||||||||| || || ||||| ||||| || || |||||||| | ||||| || Sbjct 41033 GCTACTCACTCTCGTATCCGTGGTCTCTCTGGTGGTCAAAAGGTCAAGTTGGTCATTGGT 41092 Query 280758 GCAGCTCTGTGGCAACA-CCCTCACGTGATCGTTCTCGACGAGCCTACCAACTATCTGGA 280816 || ||| ||||| |||| |||||| || | ||||| ||||| |||||||| ||| |||| Sbjct 41093 GCTGCTATGTGG-AACAGACCTCACATGCTTGTTCTTGACGAACCTACCAATTATTTGGA 41151 Query 280817 CCGCGAGAGCCTGGGCGCTCTGAGTGCTGCTCTGGACACATTTGGCGGCGGCGTCGTAGT 280876 || || || || ||| || | ||||| | | || ||| || || || || | Sbjct 41152 TCGTGAATCTCTTGGTGCTTTGGCTACTGCTATCAAGGAATATGGTGGTGGTGTTGTCAT 41211 Query 280877 CATTTCTCACA 280887 | || |||||| Sbjct 41212 CGTTACTCACA 41222 >seq141 Length=39483 Score = 174 bits (192), Expect = 3e-38 Identities = 456/684 (67%), Gaps = 29/684 (4%) Strand=Plus/Minus Query 279699 GGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGT 279758 |||||||| || |||||||||||||||||||| || || |||| ||||| | || | Sbjct 19125 GGTTCTCTCTCTGGTGGTTGGAAGATGAAGCTCGCTCTGGCTCGTGCCATGTTGATGAAT 19066 Query 279759 GCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGG 279818 || ||| |||| |||| ||||| || || || ||| |||| || || || ||| Sbjct 19065 GCTGATATCCTCTTGCTGGATGAACCTACAAATCACTTGGATGTGGTGAATGTTGCTTGG 19006 Query 279819 CTAGTGTCCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCACGACTCT 279878 || | |||||| | |||||| || | || |||||||||||||||||||| Sbjct 19005 CTTGAAAACTACCTTCTTGGCTTGAAGACAGTGACCTCTATCATTGTCTCTCACGACTCT 18946 Query 279879 GGCTTCCTAGATGCCGTGTGCTCTGCCATCATTCACTATGA--GCAA----AATCTGAAG 279932 || ||| | || ||||| | | || ||||| ||||| | || || ||||| Sbjct 18945 GGTTTCTTGGACCATGTGTGTACCGATATTATTCATTATGAAGGTAATTATAAGTTGAAG 18886 Query 279933 CTCTCCAAGCACATCGGCAACCTGTCTGCTTTCGTGGCAAA-GCGC-CCTGAGGCGGCCG 279990 | | ||| || || || || | || || |||| | | ||| || || | Sbjct 18885 CGGTATAAG------GGTAATCTCTCCGAGTTTGT--CAAACGTGTGCCTCGTGCTGCTG 18834 Query 279991 CCTACTATGACCTGAAGGACGCCACCGCCAAGTGGGAATTCCCTGAGCCAGGGTTTCTGG 280050 |||| || || | | |||| | | || ||||| || || | ||||| Sbjct 18833 CCTATTACTCTTTGGACGCTGCCAAAACTGTCTTCCGCTTTCCTGAACCTGGTTATCTGG 18774 Query 280051 AGGGCATCACATCAAAGGATCGCGCAATCATGAAGCTCCGTGGCGTCTCCTTTGCTTATC 280110 | ||||||| | ||||| || |||||| ||||| | ||| |||| |||| Sbjct 18773 AAGGCATCAAGACCAAGGAACGTGCAATCTTGAAGATGAAGAATGTCGACTTTCAGTATC 18714 Query 280111 CCAATGGCCC--CAACATCTTCAGCAG--TGTCAACTC---GCAGGTTTCTATGAACTCA 280163 | |||| | ||| | ||| | || | ||| |||| |||| | |||| Sbjct 18713 C---TGGCTCATCAA-AGAAGCAGTTGGTTGATATCTCCATGCAGTGTTCTCTTGCCTCA 18658 Query 280164 CGGATTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACT 280223 || | | || ||||| || |||||||| || ||||||||||| ||||| | |||| Sbjct 18657 CGTGTAGCCGTGATTGGTCCTAATGGTGCTGGAAAGTCTACCCTGATCAAGCTATTGACA 18598 Query 280224 GGCGAGACCCAGGCCACTGAGGGGTCCGTT-TGGAAGCATCCCAACATGCGGATGGCTTA 280282 |||||| | |||| | | |||| || | ||||||||||| || | || || || || Sbjct 18597 GGCGAGCTCGAGGCT-CAAACGGGTACGGTATGGAAGCATCCTAATTTACGCATTGCCTA 18539 Query 280283 CGTCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATA 280342 || ||||| ||||| ||||| ||||||||| | ||| |||| | ||| || ||| |||| Sbjct 18538 TGTTGCTCAACACGCCTTCCATCACATCGAGCAACACTTGGATAAGACGCCAAACGAATA 18479 Query 280343 CATTCAGTGGCGCTATGCAAGTGG 280366 |||||||||||| ||||| | ||| Sbjct 18478 CATTCAGTGGCGTTATGCTACTGG 18455 Score = 87.8 bits (96), Expect = 4e-12 Identities = 92/121 (76%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 280702 CTCACTCTCGCATTCGCGGTCTTTCTGGAGGCCAGAAGGTCAAACTTGTCATCGGAGCAG 280761 ||||||||| || || ||||| ||||| || || |||||||| |||||||| || || | Sbjct 18110 CTCACTCTCATATCCGTGGTCTCTCTGGTGGTCAAAAGGTCAAGCTTGTCATTGGTGCTG 18051 Query 280762 CTCTGTGGCAACACCCTCACGTGATCGTTCTCGACGAGCCTACCAACTATCTGGACCGCG 280821 | ||||| | ||||| || | ||||| || |||||||||||||| |||| || | Sbjct 18050 CCATGTGGAATAGACCTCATATGTTGGTTCTTGATGAGCCTACCAACTACTTGGATCGTG 17991 Query 280822 A 280822 | Sbjct 17990 A 17990 >seq657 Length=446211 Score = 105 bits (116), Expect = 1e-17 Identities = 275/411 (67%), Gaps = 24/411 (6%) Strand=Plus/Plus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| || | |||||| | || ||||| |||||||||||||||||||||||| Sbjct 211805 TCGAAGAAGTTGGTCTTGCCAGCGAGCGAGATGTTGTCCATGAAGTCGAAGGGGTTTGTG 211864 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 || ||||| | ||| | |||||| | || | | |||||| || || ||||| | Sbjct 211865 GCGTTGTAGTACTTCTTGTTGCCAAGAGAGACCAGCAGGCGGTCGGCAACGAACTCGATG 211924 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAA--GGAATTGCCTCACAGA 251740 ||||| | ||| || | |||||||| |||| | | ||| || | || || | Sbjct 211925 TACTGGCACATGAGCTTGGAGTTCATACCAA--GGAGGGCAACGGGGAGGGCGTCCGTCA 211982 Query 251741 TGAATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTC------ACCT---GTG 251791 ||| |||| || || | || | | || || || |||| |||| ||| Sbjct 211983 GGAACTCCTGCTCAATGTCGACGG---CATCAACGATGATCTTCTCGACAACCTCAGGTG 212039 Query 251792 CCAGAGACAGCTTGTTCTCCAGCTTTGAGTACAGGAG-CTCGCCAAACTGTTGGTGCAGA 251850 || | | | ||||| ||| | ||| |||| || | || || | | ||||||| Sbjct 212040 --AGGGGC-GGTTGTT---CAGGTGGGAGAACAGCAGACAAGCGAAGTCGGT-GTGCAGA 212092 Query 251851 CCCTCGTCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTC 251910 ||||| || ||| ||| | |||||| || | ||| |||||||| | ||||| ||| Sbjct 212093 CCCTCATCACGAGAGATCAGCTCGTTAGAGAAGGTCAGACCAGGCATGAGGCCACGCTTC 212152 Query 251911 CTGAGCCAGAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACA 251961 | ||||||||||| | | || || |||||||| | | |||||| ||| Sbjct 212153 TTCAGCCAGAAGATAGAGGCGAAAGAGCCAGAGAAGAAGATACCCTCAACA 212203 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027825698398963