Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017 -02-15] 843 sequences; 47,573,060 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq812 170 4e-37 seq219 161 2e-34 seq553 159 6e-34 seq657 143 5e-29 seq810 138 2e-27 seq141 107 4e-18 >seq812 Length=913560 Score = 170 bits (188), Expect = 4e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| || ||||||| || | ||| || || ||||| || |||||||| || |||||| Sbjct 528981 CCTCCACGGAGGCGCAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAG 529040 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 ||||| | ||||| || | |||||| || ||||| || || | ||| |||||||| || Sbjct 529041 AGTGTGCGGCCATCCTCAAGCTGCTTTCCAGCGAAGATCAGACGTTGCTGGTCGGGAGGG 529100 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||| || || ||||| ||||||| ||||||||||| | || || || Sbjct 529101 ATACCCTCCTTATCCTGGATCTTGCTCTTGACGTTGTCGATGGTGTCGGAAGACTCAACC 529160 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | |||||| || ||||| || |||||||| ||||| |||||||| Sbjct 529161 TCGAGGGTGATAGTCTTTCCAGTAAGGGTCTTCACGAAGATCTGCAT 529207 Score = 158 bits (174), Expect = 2e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | || | ||| || || ||||| || || ||||| |||||||| Sbjct 528753 CCACCACGCAGGCGGAGGACAAGGTGGAGAGTAGACTCCTTCTGAATGTTGTAATCGGAC 528812 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | |||||||| |||||||| || || || || || | || |||||||| || Sbjct 528813 AAGGTGCGGCCATCTTCCAACTGCTTACCAGCAAAGATAAGACGCTGCTGGTCGGGAGGG 528872 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 |||||||| || ||||| ||||| ||||||| |||||||| |||| ||||| ||| Sbjct 528873 ATGCCTTCTTTATCTTGGATCTTGCTCTTGACGTTATCGATGGTATCTGACGATTCGACT 528932 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||| || || || || || || || ||||||||||| |||||||| Sbjct 528933 TCCAGAGTAATAGTCTTGCCGGTCAGAGTCTTGACGAAAATCTGCAT 528979 Score = 140 bits (154), Expect = 6e-28 Identities = 154/205 (75%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| ||||| || | |||| ||| || |||||||| || |||||||| || || ||| Sbjct 529209 CCTCCACGAAGACGGAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 529268 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| || ||||| ||||| | || ||||| || || Sbjct 529269 AGCGTGCGACCGTCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCAGGAGGG 529328 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || |||||||| || ||||| ||||||| ||||||||||| | || || || Sbjct 529329 ATACCCTCCTTGTCCTGGATCTTGCTCTTGACGTTGTCGATGGTGTCCGAGGACTCGACC 529388 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGA 68439 || | ||||||||| ||||| |||| Sbjct 529389 TCGAGGGTGATGGTCTTTCCAGTGA 529413 Score = 131 bits (144), Expect = 3e-25 Identities = 171/234 (73%), Gaps = 2/234 (1%) Strand=Plus/Plus Query 68229 TAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAA 68288 || ||||| || || || |||| |||| ||| || || || || || |||||||| || Sbjct 528519 TAGTTTCCACCACGGAGTCGCAGAACCAGGTGCAGGGTAGATTCCTTCTGGATGTTGTAG 528578 Query 68289 TCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCG 68348 ||||| | || | || || || | |||||| || || || || || | || ||||| Sbjct 528579 TCGGACAAGGTACGACCGTCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCA 528638 Query 68349 GGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GA 68407 || || || |||||||||||||||||||| ||| ||| || || ||||| ||| || Sbjct 528639 GGAGGGATACCTTCCTTGTCTTGAATCTTGCTCTTCACGTTGTCAATTGTGTC-GCTGGA 528697 Query 68408 TTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||| || ||||| ||||| || || || || | ||||| || || |||||||| Sbjct 528698 TTCAACCTCCAATGTGATAGTCTTGCCAGTCAAAGTCTTAACAAAAATCTGCAT 528751 >seq219 Length=30711 Score = 161 bits (178), Expect = 2e-34 Identities = 334/493 (68%), Gaps = 18/493 (4%) Strand=Plus/Minus Query 268246 CTGGAGCATTTTCCACATTGCTTCGACATAGTCCCGCGCATGGCCCCAATCGCGCTTTGC 268305 ||| ||||| |||||| |||||||||| || || ||||| |||||||| ||||| || Sbjct 13087 CTGCAGCATGAGCCACATACCTTCGACATAATCACGAGCATGTCCCCAATCACGCTTAGC 13028 Query 268306 GTCCATGTTCCCGAGGAACAGGCATTTCTG-CTTGCCGAGCTTCACGCGTGCAAGACCGC 268364 || || || ||||| | ||||| | || | | || || | | ||| | | | | Sbjct 13027 ATCAATATTACCGAGATAAAGGCACTCTTGACGTCCCAAG-TGGATATCTGCGACAGCAC 12969 Query 268365 GAGTGATTTTTCGGGTCACGAACGTCTCGCCACGTAGAGGGCTCTCGTGGTTGAAGAGGA 268424 |||| || |||||||| ||||| || |||||| |||| || |||||||| || | Sbjct 12968 GAGTAATCTTTCGGGTAACGAAGGTACGGCCACGACGAGGTGATTCATGGTTGAATAGAA 12909 Query 268425 TGCCGTTGCACGCGAACATGCCATATGCCTCACGGTAGTTCACGACCG---TCCAGTATG 268481 | || || || || ||||| |||| ||||||||||| ||||| |||| || Sbjct 12908 TACCATTACAGGCAAACATATTGTATGATTCACGGTAGTT---GACCGTAATCCAATAAC 12852 Query 268482 CAAACATCTTTGCAACTGCGTACGGAGAACGTGGATGGAAGGGCGTCGTGATCTTTTGAG 268541 || | | ||| || || | || || ||||| |||| |||||| || || |||||| | Sbjct 12851 CATAAAGCTTGGCTACACCATAAGGGGAACGGGGATAGAAGGGTGTTGTTTCCTTTTGGG 12792 Query 268542 GGATTTCTCGGACTTTGCCAAAGAGCTCGGAGGTCGATGCTTGGTA-----GAACTTTGT 268596 | |||| ||||| ||| |||| || ||||| || ||||| || |||| | Sbjct 12791 GTGTTTCAACTACTTTACCATAGAGTTCAGAGGTAGAAGCTTGATAGAAACGAACACGAT 12732 Query 268597 TGTTTTTTCGAGACCGCAGATTCGGATTGCCTCGAGCAAACGAAGAGTTCCCATGCCATC 268656 | || | ||| || | ||||| || || || |||||||| || || | | || Sbjct 12731 CGGTT-----AAACCACAAGTACGGATAGCATCAAGTAAACGAAGTGTGCCAAGAGCGTC 12677 Query 268657 CACGTCCGCTGTATACTCCGGCATCTCGAATGACACCTGGACATGGCTCTGGGCGCCCAG 268716 ||||| | ||||| || | ||| || || || |||| |||||| || || | || Sbjct 12676 GACGTCACCGGTATATTCTGACATGTCAAAAGAGACCTTGACATGAGATTGAGCTGCAAG 12617 Query 268717 GTTATAAACCTCA 268729 || ||||| ||| Sbjct 12616 ATTGTAAACTTCA 12604 >seq553 Length=41262 Score = 159 bits (176), Expect = 6e-34 Identities = 440/669 (66%), Gaps = 29/669 (4%) Strand=Plus/Minus Query 224978 TACCGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAA 225037 || ||||| |||||||| | ||| ||||| |||||| ||| || || ||||||||| Sbjct 40683 TAACGCCATTGGATGTATTCGTTAGGGGTTTTGTCCAAGTGACGTTCGATGTGGTGGAAA 40624 Query 225038 GCATGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCC-----CC 225092 ||||| || || || || || ||||||| ||| ||||| |||| |||| || | Sbjct 40623 GCATGTTGAGCGACATAGGCAATGCGCAAGTTAGGATGTCTCCAGACAGTACCAACCTCG 40564 Query 225093 GAGTCGGTTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGG 225152 || ||| || || || || | | |||||| | |||| ||| || ||||| |||| Sbjct 40563 GACTCGATT-----TCACCAGTCAACAACTTGATCAAGGTAGACTTACCAGCACCGTTGG 40509 Query 225153 GGCCAATCACGCCAATCCGGGATG-------ACATTGCAACCTGCGAGTTCAC---GTTG 225202 | ||||| ||| ||| ||||| | |||||||| | || ||| |||| Sbjct 40508 GACCAATGACGGCAACACGGGAGGCAAGAGAACATTGCATG--GAGATGTCAATCAGTTG 40451 Query 225203 CTGAAGATCTCAGGGCCAGTTTGGTAAGCAAAGGCCACGCCACGCAGCTTCATGATGGCA 225262 || | || || |||| | || ||| | ||| || ||||| ||| ||| Sbjct 40450 CTTGCGGTC--AGAACCAG---GATACTGGAAGTCAACGTTCTTCATCTTCAAGATTGCA 40396 Query 225263 CGGTCCTTGGAAGTAATACCCTCCAGGAACCCGGGCTCGGGGAACTCCCACTTGGTCACC 225322 || ||||| | | ||||| |||| ||| || ||||| ||||| ||||| | Sbjct 40395 CGTTCCTTAGTCTTGATACCTTCCAAGAAACCAGGCTCAGGGAAAGAGAACTTGATTTGA 40336 Query 225323 GCGTCCTTCAGGTCGTAGTAAGATGCAGC-CTCGGGTCGCTTTGCCACGAAAGCAGACAG 225381 | | | || | ||||||||| ||||| | ||| | ||| ||||| | |||| Sbjct 40335 GTAGCTTCCAAGGAGTAGTAAGAGGCAGCACGAGGGAC-CTTCTTTACGAATTCGGACAA 40277 Query 225382 GTTTCCGAGGTGCTTCGTGAGCTTGAGGTTCTTCTCGTAATGAACAATTGCCGAGCACAC 225441 ||| || || | ||||||| ||| ||||| |||| || | || || || Sbjct 40276 GTTACCCTTGTAGCGCTTGAGCTTATAGTTGGGTTCGTAGTGAATGATGTCGGAACAGAC 40217 Query 225442 TGCGTCAAGGAAGCCAGAGTCGTGGGACACAATGATGGACGACACGTTCGTCAGGCCCTT 225501 || | ||| |||||||||||||| |||||||| || | || || ||| || Sbjct 40216 ATGATCCAAGAAACCAGAGTCGTGGGAGACAATGATAGAGGTAACAGTCTTCAAACCAAG 40157 Query 225502 GAGGTGCGTGATGAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAG 225561 |||| | ||||| || |||||| || |||| ||| || ||||||||||||| Sbjct 40156 AAGGTAGTTCTCCAGCCAGGCAACGTTGACAACATCCAAGTGATTGGTAGGTTCGTCCAA 40097 Query 225562 AAGCAGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCC 225621 | ||||| ||||||| || | || || || | |||| |||||||| ||||| || Sbjct 40096 CAAGAGGATATCAGCATTCATCAACATAGCACGGGCAAGAGCAAGCTTCATCTTCCAACC 40037 Query 225622 CCCGGACAG 225630 || || || Sbjct 40036 ACCAGAGAG 40028 Score = 109 bits (120), Expect = 1e-18 Identities = 101/128 (79%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 224566 CCACAGGGCTGCACCAACCACCAGCTTCACCTTCTGACCGCCAGAGAGGCCGCGGATCCG 224625 ||||| || ||||||| |||| ||| ||||| ||||| |||||||| || ||||| || Sbjct 41104 CCACATAGCAGCACCAATGACCAACTTGACCTTTTGACCACCAGAGAGACCACGGATACG 41045 Query 224626 CGAGTGAGTCGTGAATTCGGGGTCAAGACCAATCTTGGCCATATGGTCCTCGATGTTCTT 224685 |||||||| | ||||||||| |||||||||| | |||| || | ||||| | ||| Sbjct 41044 AGAGTGAGTAGCGAATTCGGGTTCAAGACCAACTTCAGCCAAGTGCTTTTCGATTTCCTT 40985 Query 224686 GGCAGTCA 224693 |||||||| Sbjct 40984 GGCAGTCA 40977 >seq657 Length=446211 Score = 143 bits (158), Expect = 5e-29 Identities = 319/472 (68%), Gaps = 14/472 (3%) Strand=Plus/Plus Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994 |||||| || ||||||||||| || || || |||||||||||||| |||||| | Sbjct 211768 CATGACACCGGCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGC 211827 Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACC 10054 ||| || ||| ||||||||||| |||||||| |||| | | ||| || || Sbjct 211828 GAGCGAGATGTTGTCCATGAAGTCGAAGGGGTTTGTGGCGTTGTAGTACTTCTTGTTGCC 211887 Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTT 10114 || | | | |||||| || ||||||||||||||||||| ||| || | ||||| Sbjct 211888 AAGAGAGACCAGCAGGCGGTCGGCAACGAACTCGATGTACTGGCACATGAGCTTGGAGTT 211947 Query 10115 CATGCCAATCATGCGGCA--GGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACC 10172 ||| |||| | |||| ||||| |||||| | ||| |||| || || |||| Sbjct 211948 CATACCAAGGA--GGGCAACGGGGAGGGCGTCCGTCAGGAACTCCTGCTCAATGTCGACG 212005 Query 10173 GCTTCCTCGACGATGCTCTTTACCACGTCA----AGGGACAGCTTGTTCTCGAGCTTCGA 10228 || || ||| ||| ||| || || ||| |||| | | |||||| || | || Sbjct 212006 GCATCAACGATGATCTTCTCGACAACCTCAGGTGAGGGGC-GGTTGTTC---AGGTGGGA 212061 Query 10229 ATACAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGA 10288 |||| || | || | ||| || ||||| || || ||| | |||||| || Sbjct 212062 GAACAGCAGACAAGCGAAGTCGGTGTGCAGACCCTCATCACGAGAGATCAGCTCGTTAGA 212121 Query 10289 CAAACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCC 10348 || |||||| |||||||| || || || ||||||||| || | | ||| || || Sbjct 212122 GAAGGTCAGACCAGGCATGAGGCCACGCTTCTTCAGCCAGAAGATAGAGGCGAAAGAGCC 212181 Query 10349 GGAGAACAGAAGACCCTCCAC-GCACACCCAGGCGACGAGGCGCTCTGCGAA 10399 ||||| | | |||||| || ||| | |||| || | ||||| ||||| Sbjct 212182 AGAGAAGAAGATACCCTCAACAGCA-GCGAAGGCAACCAAGCGCTGGGCGAA 212232 >seq810 Length=1034423 Score = 138 bits (152), Expect = 2e-27 Identities = 138/179 (77%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 || |||||||| || ||| || || | |||||||| | |||||| |||||||| || Sbjct 583009 TTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCTTCGAGCTGCTTTCCGGCGAAGATC 582950 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 || | || ||||| || |||||||| |||||||| || ||||| ||||||||| ||| Sbjct 582949 AGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCG 582890 Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 || ||||| | || || || || | ||| ||||| || ||||| |||||||||||||| Sbjct 582889 ATCGTGTCGGACGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 582831 >seq141 Length=39483 Score = 107 bits (118), Expect = 4e-18 Identities = 158/224 (71%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 225416 TCGTAATGAACAATTGCCGAGCACACTGCGTCAAGGAAGCCAGAGTCGTGGGACACAATG 225475 || ||||||| ||| | | ||||| ||| | ||| ||||||||||| || |||||| Sbjct 18905 TCATAATGAATAATATCGGTACACACATGGTCCAAGAAACCAGAGTCGTGAGAGACAATG 18964 Query 225476 ATGGACGACACGTTCGTCAGGCCCTTGAGGTGCGTGATGAGCCATGCCACGTTGCTGACG 225535 || || | ||| || ||| ||| |||| | ||||| || || || || Sbjct 18965 ATAGAGGTCACTGTCTTCAAGCCAAGAAGGTAGTTTTCAAGCCAAGCAACATTCACCACA 19024 Query 225536 TCCATGTGGTTTGTAGGTTCGTCCAGAAGCAGGATGTCAGCATCAATGAGGATGGCGCGC 225595 |||| ||| ||||||||||| ||||| | ||||| ||||||| || | ||||| || Sbjct 19025 TCCAAGTGATTTGTAGGTTCATCCAGCAAGAGGATATCAGCATTCATCAACATGGCACGA 19084 Query 225596 GTGAGAGACAGCTTCATTTTCCAGCCCCCGGACAGGGAGCCGAT 225639 | |||| |||||||| ||||| || || || || || ||||| Sbjct 19085 GCCAGAGCGAGCTTCATCTTCCAACCACCAGAGAGAGAACCGAT 19128 Score = 104 bits (114), Expect = 4e-17 Identities = 140/192 (73%), Gaps = 6/192 (3%) Strand=Plus/Plus Query 224975 GCATACCGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGG 225034 ||||| |||||||| ||||| | ||| || ||| | |||| ||| | ||| || || ||| Sbjct 18461 GCATAACGCCACTGAATGTATTCGTTTGGCGTCTTATCCAAGTGTTGCTCGATGTGATGG 18520 Query 225035 AAAGCATGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCC--- 225091 || || || || || || || || ||||| | || ||||||||||| || | ||| Sbjct 18521 AAGGCGTGTTGAGCAACATAGGCAATGCGTAAATTAGGATGCTTCCATACCGTACCCGTT 18580 Query 225092 CGAGTCGGTTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTG 225151 ||| | | | | |||||| || | | |||||| || |||| ||| || |||||||| Sbjct 18581 TGAGCC--TCGAG-CTCGCCTGTCAATAGCTTGATCAGGGTAGACTTTCCAGCACCATTA 18637 Query 225152 GGGCCAATCACG 225163 || ||||||||| Sbjct 18638 GGACCAATCACG 18649 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921612688403960