Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017
-02-15] 843 sequences; 47,573,060 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq812 170 4e-37
seq219 161 2e-34
seq553 159 6e-34
seq657 143 5e-29
seq810 138 2e-27
seq141 107 4e-18
>seq812
Length=913560
Score = 170 bits (188), Expect = 4e-37
Identities = 174/227 (77%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
||||| || ||||||| || | ||| || || ||||| || |||||||| || ||||||
Sbjct 528981 CCTCCACGGAGGCGCAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAG 529040
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
||||| | ||||| || | |||||| || ||||| || || | ||| |||||||| ||
Sbjct 529041 AGTGTGCGGCCATCCTCAAGCTGCTTTCCAGCGAAGATCAGACGTTGCTGGTCGGGAGGG 529100
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || ||||| || || ||||| ||||||| ||||||||||| | || || ||
Sbjct 529101 ATACCCTCCTTATCCTGGATCTTGCTCTTGACGTTGTCGATGGTGTCGGAAGACTCAACC 529160
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | |||||| || ||||| || |||||||| ||||| ||||||||
Sbjct 529161 TCGAGGGTGATAGTCTTTCCAGTAAGGGTCTTCACGAAGATCTGCAT 529207
Score = 158 bits (174), Expect = 2e-33
Identities = 171/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || ||||| | || | ||| || || ||||| || || ||||| ||||||||
Sbjct 528753 CCACCACGCAGGCGGAGGACAAGGTGGAGAGTAGACTCCTTCTGAATGTTGTAATCGGAC 528812
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
| || | |||||||| |||||||| || || || || || | || |||||||| ||
Sbjct 528813 AAGGTGCGGCCATCTTCCAACTGCTTACCAGCAAAGATAAGACGCTGCTGGTCGGGAGGG 528872
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|||||||| || ||||| ||||| ||||||| |||||||| |||| ||||| |||
Sbjct 528873 ATGCCTTCTTTATCTTGGATCTTGCTCTTGACGTTATCGATGGTATCTGACGATTCGACT 528932
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|||| || || || || || || || ||||||||||| ||||||||
Sbjct 528933 TCCAGAGTAATAGTCTTGCCGGTCAGAGTCTTGACGAAAATCTGCAT 528979
Score = 140 bits (154), Expect = 6e-28
Identities = 154/205 (75%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
||||| ||||| || | |||| ||| || |||||||| || |||||||| || || |||
Sbjct 529209 CCTCCACGAAGACGGAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 529268
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || || || | |||||| || ||||| ||||| | || ||||| || ||
Sbjct 529269 AGCGTGCGACCGTCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCAGGAGGG 529328
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || |||||||| || ||||| ||||||| ||||||||||| | || || ||
Sbjct 529329 ATACCCTCCTTGTCCTGGATCTTGCTCTTGACGTTGTCGATGGTGTCCGAGGACTCGACC 529388
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGA 68439
|| | ||||||||| ||||| ||||
Sbjct 529389 TCGAGGGTGATGGTCTTTCCAGTGA 529413
Score = 131 bits (144), Expect = 3e-25
Identities = 171/234 (73%), Gaps = 2/234 (1%)
Strand=Plus/Plus
Query 68229 TAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAA 68288
|| ||||| || || || |||| |||| ||| || || || || || |||||||| ||
Sbjct 528519 TAGTTTCCACCACGGAGTCGCAGAACCAGGTGCAGGGTAGATTCCTTCTGGATGTTGTAG 528578
Query 68289 TCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCG 68348
||||| | || | || || || | |||||| || || || || || | || |||||
Sbjct 528579 TCGGACAAGGTACGACCGTCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCA 528638
Query 68349 GGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GA 68407
|| || || |||||||||||||||||||| ||| ||| || || ||||| ||| ||
Sbjct 528639 GGAGGGATACCTTCCTTGTCTTGAATCTTGCTCTTCACGTTGTCAATTGTGTC-GCTGGA 528697
Query 68408 TTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||| || ||||| ||||| || || || || | ||||| || || ||||||||
Sbjct 528698 TTCAACCTCCAATGTGATAGTCTTGCCAGTCAAAGTCTTAACAAAAATCTGCAT 528751
>seq219
Length=30711
Score = 161 bits (178), Expect = 2e-34
Identities = 334/493 (68%), Gaps = 18/493 (4%)
Strand=Plus/Minus
Query 268246 CTGGAGCATTTTCCACATTGCTTCGACATAGTCCCGCGCATGGCCCCAATCGCGCTTTGC 268305
||| ||||| |||||| |||||||||| || || ||||| |||||||| ||||| ||
Sbjct 13087 CTGCAGCATGAGCCACATACCTTCGACATAATCACGAGCATGTCCCCAATCACGCTTAGC 13028
Query 268306 GTCCATGTTCCCGAGGAACAGGCATTTCTG-CTTGCCGAGCTTCACGCGTGCAAGACCGC 268364
|| || || ||||| | ||||| | || | | || || | | ||| | | | |
Sbjct 13027 ATCAATATTACCGAGATAAAGGCACTCTTGACGTCCCAAG-TGGATATCTGCGACAGCAC 12969
Query 268365 GAGTGATTTTTCGGGTCACGAACGTCTCGCCACGTAGAGGGCTCTCGTGGTTGAAGAGGA 268424
|||| || |||||||| ||||| || |||||| |||| || |||||||| || |
Sbjct 12968 GAGTAATCTTTCGGGTAACGAAGGTACGGCCACGACGAGGTGATTCATGGTTGAATAGAA 12909
Query 268425 TGCCGTTGCACGCGAACATGCCATATGCCTCACGGTAGTTCACGACCG---TCCAGTATG 268481
| || || || || ||||| |||| ||||||||||| ||||| |||| ||
Sbjct 12908 TACCATTACAGGCAAACATATTGTATGATTCACGGTAGTT---GACCGTAATCCAATAAC 12852
Query 268482 CAAACATCTTTGCAACTGCGTACGGAGAACGTGGATGGAAGGGCGTCGTGATCTTTTGAG 268541
|| | | ||| || || | || || ||||| |||| |||||| || || |||||| |
Sbjct 12851 CATAAAGCTTGGCTACACCATAAGGGGAACGGGGATAGAAGGGTGTTGTTTCCTTTTGGG 12792
Query 268542 GGATTTCTCGGACTTTGCCAAAGAGCTCGGAGGTCGATGCTTGGTA-----GAACTTTGT 268596
| |||| ||||| ||| |||| || ||||| || ||||| || |||| |
Sbjct 12791 GTGTTTCAACTACTTTACCATAGAGTTCAGAGGTAGAAGCTTGATAGAAACGAACACGAT 12732
Query 268597 TGTTTTTTCGAGACCGCAGATTCGGATTGCCTCGAGCAAACGAAGAGTTCCCATGCCATC 268656
| || | ||| || | ||||| || || || |||||||| || || | | ||
Sbjct 12731 CGGTT-----AAACCACAAGTACGGATAGCATCAAGTAAACGAAGTGTGCCAAGAGCGTC 12677
Query 268657 CACGTCCGCTGTATACTCCGGCATCTCGAATGACACCTGGACATGGCTCTGGGCGCCCAG 268716
||||| | ||||| || | ||| || || || |||| |||||| || || | ||
Sbjct 12676 GACGTCACCGGTATATTCTGACATGTCAAAAGAGACCTTGACATGAGATTGAGCTGCAAG 12617
Query 268717 GTTATAAACCTCA 268729
|| ||||| |||
Sbjct 12616 ATTGTAAACTTCA 12604
>seq553
Length=41262
Score = 159 bits (176), Expect = 6e-34
Identities = 440/669 (66%), Gaps = 29/669 (4%)
Strand=Plus/Minus
Query 224978 TACCGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAA 225037
|| ||||| |||||||| | ||| ||||| |||||| ||| || || |||||||||
Sbjct 40683 TAACGCCATTGGATGTATTCGTTAGGGGTTTTGTCCAAGTGACGTTCGATGTGGTGGAAA 40624
Query 225038 GCATGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCC-----CC 225092
||||| || || || || || ||||||| ||| ||||| |||| |||| || |
Sbjct 40623 GCATGTTGAGCGACATAGGCAATGCGCAAGTTAGGATGTCTCCAGACAGTACCAACCTCG 40564
Query 225093 GAGTCGGTTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGG 225152
|| ||| || || || || | | |||||| | |||| ||| || ||||| ||||
Sbjct 40563 GACTCGATT-----TCACCAGTCAACAACTTGATCAAGGTAGACTTACCAGCACCGTTGG 40509
Query 225153 GGCCAATCACGCCAATCCGGGATG-------ACATTGCAACCTGCGAGTTCAC---GTTG 225202
| ||||| ||| ||| ||||| | |||||||| | || ||| ||||
Sbjct 40508 GACCAATGACGGCAACACGGGAGGCAAGAGAACATTGCATG--GAGATGTCAATCAGTTG 40451
Query 225203 CTGAAGATCTCAGGGCCAGTTTGGTAAGCAAAGGCCACGCCACGCAGCTTCATGATGGCA 225262
|| | || || |||| | || ||| | ||| || ||||| ||| |||
Sbjct 40450 CTTGCGGTC--AGAACCAG---GATACTGGAAGTCAACGTTCTTCATCTTCAAGATTGCA 40396
Query 225263 CGGTCCTTGGAAGTAATACCCTCCAGGAACCCGGGCTCGGGGAACTCCCACTTGGTCACC 225322
|| ||||| | | ||||| |||| ||| || ||||| ||||| ||||| |
Sbjct 40395 CGTTCCTTAGTCTTGATACCTTCCAAGAAACCAGGCTCAGGGAAAGAGAACTTGATTTGA 40336
Query 225323 GCGTCCTTCAGGTCGTAGTAAGATGCAGC-CTCGGGTCGCTTTGCCACGAAAGCAGACAG 225381
| | | || | ||||||||| ||||| | ||| | ||| ||||| | ||||
Sbjct 40335 GTAGCTTCCAAGGAGTAGTAAGAGGCAGCACGAGGGAC-CTTCTTTACGAATTCGGACAA 40277
Query 225382 GTTTCCGAGGTGCTTCGTGAGCTTGAGGTTCTTCTCGTAATGAACAATTGCCGAGCACAC 225441
||| || || | ||||||| ||| ||||| |||| || | || || ||
Sbjct 40276 GTTACCCTTGTAGCGCTTGAGCTTATAGTTGGGTTCGTAGTGAATGATGTCGGAACAGAC 40217
Query 225442 TGCGTCAAGGAAGCCAGAGTCGTGGGACACAATGATGGACGACACGTTCGTCAGGCCCTT 225501
|| | ||| |||||||||||||| |||||||| || | || || ||| ||
Sbjct 40216 ATGATCCAAGAAACCAGAGTCGTGGGAGACAATGATAGAGGTAACAGTCTTCAAACCAAG 40157
Query 225502 GAGGTGCGTGATGAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAG 225561
|||| | ||||| || |||||| || |||| ||| || |||||||||||||
Sbjct 40156 AAGGTAGTTCTCCAGCCAGGCAACGTTGACAACATCCAAGTGATTGGTAGGTTCGTCCAA 40097
Query 225562 AAGCAGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCC 225621
| ||||| ||||||| || | || || || | |||| |||||||| ||||| ||
Sbjct 40096 CAAGAGGATATCAGCATTCATCAACATAGCACGGGCAAGAGCAAGCTTCATCTTCCAACC 40037
Query 225622 CCCGGACAG 225630
|| || ||
Sbjct 40036 ACCAGAGAG 40028
Score = 109 bits (120), Expect = 1e-18
Identities = 101/128 (79%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 224566 CCACAGGGCTGCACCAACCACCAGCTTCACCTTCTGACCGCCAGAGAGGCCGCGGATCCG 224625
||||| || ||||||| |||| ||| ||||| ||||| |||||||| || ||||| ||
Sbjct 41104 CCACATAGCAGCACCAATGACCAACTTGACCTTTTGACCACCAGAGAGACCACGGATACG 41045
Query 224626 CGAGTGAGTCGTGAATTCGGGGTCAAGACCAATCTTGGCCATATGGTCCTCGATGTTCTT 224685
|||||||| | ||||||||| |||||||||| | |||| || | ||||| | |||
Sbjct 41044 AGAGTGAGTAGCGAATTCGGGTTCAAGACCAACTTCAGCCAAGTGCTTTTCGATTTCCTT 40985
Query 224686 GGCAGTCA 224693
||||||||
Sbjct 40984 GGCAGTCA 40977
>seq657
Length=446211
Score = 143 bits (158), Expect = 5e-29
Identities = 319/472 (68%), Gaps = 14/472 (3%)
Strand=Plus/Plus
Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994
|||||| || ||||||||||| || || || |||||||||||||| |||||| |
Sbjct 211768 CATGACACCGGCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGC 211827
Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACC 10054
||| || ||| ||||||||||| |||||||| |||| | | ||| || ||
Sbjct 211828 GAGCGAGATGTTGTCCATGAAGTCGAAGGGGTTTGTGGCGTTGTAGTACTTCTTGTTGCC 211887
Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTT 10114
|| | | | |||||| || ||||||||||||||||||| ||| || | |||||
Sbjct 211888 AAGAGAGACCAGCAGGCGGTCGGCAACGAACTCGATGTACTGGCACATGAGCTTGGAGTT 211947
Query 10115 CATGCCAATCATGCGGCA--GGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACC 10172
||| |||| | |||| ||||| |||||| | ||| |||| || || ||||
Sbjct 211948 CATACCAAGGA--GGGCAACGGGGAGGGCGTCCGTCAGGAACTCCTGCTCAATGTCGACG 212005
Query 10173 GCTTCCTCGACGATGCTCTTTACCACGTCA----AGGGACAGCTTGTTCTCGAGCTTCGA 10228
|| || ||| ||| ||| || || ||| |||| | | |||||| || | ||
Sbjct 212006 GCATCAACGATGATCTTCTCGACAACCTCAGGTGAGGGGC-GGTTGTTC---AGGTGGGA 212061
Query 10229 ATACAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGA 10288
|||| || | || | ||| || ||||| || || ||| | |||||| ||
Sbjct 212062 GAACAGCAGACAAGCGAAGTCGGTGTGCAGACCCTCATCACGAGAGATCAGCTCGTTAGA 212121
Query 10289 CAAACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCC 10348
|| |||||| |||||||| || || || ||||||||| || | | ||| || ||
Sbjct 212122 GAAGGTCAGACCAGGCATGAGGCCACGCTTCTTCAGCCAGAAGATAGAGGCGAAAGAGCC 212181
Query 10349 GGAGAACAGAAGACCCTCCAC-GCACACCCAGGCGACGAGGCGCTCTGCGAA 10399
||||| | | |||||| || ||| | |||| || | ||||| |||||
Sbjct 212182 AGAGAAGAAGATACCCTCAACAGCA-GCGAAGGCAACCAAGCGCTGGGCGAA 212232
>seq810
Length=1034423
Score = 138 bits (152), Expect = 2e-27
Identities = 138/179 (77%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333
|| |||||||| || ||| || || | |||||||| | |||||| |||||||| ||
Sbjct 583009 TTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCTTCGAGCTGCTTTCCGGCGAAGATC 582950
Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393
|| | || ||||| || |||||||| |||||||| || ||||| ||||||||| |||
Sbjct 582949 AGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCG 582890
Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452
|| ||||| | || || || || | ||| ||||| || ||||| ||||||||||||||
Sbjct 582889 ATCGTGTCGGACGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 582831
>seq141
Length=39483
Score = 107 bits (118), Expect = 4e-18
Identities = 158/224 (71%), Gaps = 0/224 (0%)
Strand=Plus/Plus
Query 225416 TCGTAATGAACAATTGCCGAGCACACTGCGTCAAGGAAGCCAGAGTCGTGGGACACAATG 225475
|| ||||||| ||| | | ||||| ||| | ||| ||||||||||| || ||||||
Sbjct 18905 TCATAATGAATAATATCGGTACACACATGGTCCAAGAAACCAGAGTCGTGAGAGACAATG 18964
Query 225476 ATGGACGACACGTTCGTCAGGCCCTTGAGGTGCGTGATGAGCCATGCCACGTTGCTGACG 225535
|| || | ||| || ||| ||| |||| | ||||| || || || ||
Sbjct 18965 ATAGAGGTCACTGTCTTCAAGCCAAGAAGGTAGTTTTCAAGCCAAGCAACATTCACCACA 19024
Query 225536 TCCATGTGGTTTGTAGGTTCGTCCAGAAGCAGGATGTCAGCATCAATGAGGATGGCGCGC 225595
|||| ||| ||||||||||| ||||| | ||||| ||||||| || | ||||| ||
Sbjct 19025 TCCAAGTGATTTGTAGGTTCATCCAGCAAGAGGATATCAGCATTCATCAACATGGCACGA 19084
Query 225596 GTGAGAGACAGCTTCATTTTCCAGCCCCCGGACAGGGAGCCGAT 225639
| |||| |||||||| ||||| || || || || || |||||
Sbjct 19085 GCCAGAGCGAGCTTCATCTTCCAACCACCAGAGAGAGAACCGAT 19128
Score = 104 bits (114), Expect = 4e-17
Identities = 140/192 (73%), Gaps = 6/192 (3%)
Strand=Plus/Plus
Query 224975 GCATACCGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGG 225034
||||| |||||||| ||||| | ||| || ||| | |||| ||| | ||| || || |||
Sbjct 18461 GCATAACGCCACTGAATGTATTCGTTTGGCGTCTTATCCAAGTGTTGCTCGATGTGATGG 18520
Query 225035 AAAGCATGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCC--- 225091
|| || || || || || || || ||||| | || ||||||||||| || | |||
Sbjct 18521 AAGGCGTGTTGAGCAACATAGGCAATGCGTAAATTAGGATGCTTCCATACCGTACCCGTT 18580
Query 225092 CGAGTCGGTTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTG 225151
||| | | | | |||||| || | | |||||| || |||| ||| || ||||||||
Sbjct 18581 TGAGCC--TCGAG-CTCGCCTGTCAATAGCTTGATCAGGGTAGACTTTCCAGCACCATTA 18637
Query 225152 GGGCCAATCACG 225163
|| |||||||||
Sbjct 18638 GGACCAATCACG 18649
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921612688403960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |