Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017
-02-15] 843 sequences; 47,573,060 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq657 242 7e-59
seq578 174 3e-38
>seq657
Length=446211
Score = 242 bits (268), Expect = 7e-59
Identities = 364/514 (71%), Gaps = 5/514 (1%)
Strand=Plus/Minus
Query 42633 CCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACG 42692
||||||||| |||||||| |||||||| | ||||||| || || | ||
Sbjct 212292 CCCTGCATCCGCAAGAAGGCCGACTGGGCCATTCGCTGGATCCAGGACAAGGAGTCCACT 212233
Query 42693 TTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTC 42752
|||| | || | |||| ||||| | || || ||||| ||||||||||| ||| | |||
Sbjct 212232 TTCGCCCAGCGCTTGGTTGCCTTCGCTGCTGTTGAGGGTATCTTCTTCTCTGGCTCTTTC 212173
Query 42753 GCCTCCATCTTCTGGCTCAAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGA 42811
||||| ||||||||||| ||| || || || ||||| || || |||||||| |||||
Sbjct 212172 GCCTCTATCTTCTGGCTGAAGAAGCGTGGCCTC-ATGCCTGGTCTGACCTTCTCTAACGA 212114
Query 42812 ACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCA 42871
|| ||| | || ||||| ||||| | ||||| || || || |||||||| |||
Sbjct 212113 GCTGATCTCTCGTGATGAGGGTCTGCACACCGACTTCGCTTGTCTGCTGTTCTC---CCA 212057
Query 42872 CCTCAGGCACAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGAT 42931
||| | || ||||| ||| ||| | |||||| || ||||| || ||
Sbjct 212056 CCTGAACAACCGCCCCTCACCTGAGGTTGTCGAGAAGATCATCGTTGATGCCGTCGACAT 211997
Query 42932 CGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCT 42991
||| |||||||||| ||| | | || ||||| |||| | || |||||| | | ||
Sbjct 211996 TGAGCAGGAGTTCCTGACGGACGCCCTCCCCGTTGCCCTCCTTGGTATGAACTCCAAGCT 211937
Query 42992 CATGTGCAAGTACATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAGCCG 43051
||||||| |||||||| ||| ||| ||||||| || ||| | | || ||
Sbjct 211936 CATGTGCCAGTACATCGAGTTCGTTGCCGACCGCCTGCTGGTCTCTCTTGGCAACAAGAA 211877
Query 43052 CCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGAC 43111
||||||| | | |||||||||||| ||||| ||||||||| | | ||||||||
Sbjct 211876 GTACTACAACGCCACAAACCCCTTCGACTTCATGGACAACATCTCGCTCGCTGGCAAGAC 211817
Query 43112 CAACTTTTTCGAGAAGCGCGTCGCCGACTACCAG 43145
|||||| ||||||||||| |||| |||||||||
Sbjct 211816 CAACTTCTTCGAGAAGCGTGTCGGTGACTACCAG 211783
Score = 118 bits (130), Expect = 2e-21
Identities = 207/298 (69%), Gaps = 5/298 (2%)
Strand=Plus/Minus
Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359
|||||| |||||||||||||| || ||| |||||| || |||||||| || |||
Sbjct 212687 ATCTGGCAGATGTACAAGAAGGCAGAGGCTTCCTTCTGGACTGCTGAGGAGATCGATCTG 212628
Query 42360 GCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGAG-AACGAAAAG---TTTTTCCTCAA 42415
|||||||| | || |||| | || | || | || || || | ||| ||
Sbjct 212627 TCCAAGGACCTGCACGACTGGAACA-ACCGCCTCAACAATGACGAGCGCTACTTCATCTC 212569
Query 42416 AAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAG 42475
| | ||||| ||||||||||| ||||||||||| ||||| |||||||| | | |
Sbjct 212568 CCATGTCCTGGCTTTCTTCGCCGCGTCTGACGGCATCGTCAACGAGAACCTCGTCGAGCG 212509
Query 42476 GTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCAT 42535
|||| ||||| ||| | |||||| || ||||||||||| |||||||| ||
Sbjct 212508 TTTCAGTGGCGAGGTCCAGGTCCCTGAGGCTCGTTGCTTCTACGGTTTCCAGATCATGAT 212449
Query 42536 AGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCC 42593
|||||| | ||||| ||| ||| || || || |||| |||||| ||| |||
Sbjct 212448 GGAGAACATCCACTCCGAGACATACTCCCTTCTCATCGACACCTACATCAAGGAGCCC 212391
>seq578
Length=440600
Score = 174 bits (192), Expect = 3e-38
Identities = 305/438 (70%), Gaps = 12/438 (3%)
Strand=Plus/Minus
Query 245008 CTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTG--CTCG 245065
|| ||||||||| ||||| |||||||||| | ||||||||| | || ||||| |||
Sbjct 115918 CTTCATGAAGAGATCGGGAGTCCAGAGGGCATAGAAGAGGTCAC--GTGCTCTGACCTCT 115861
Query 245066 TCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCC 245125
||| || |||||| | || ||||| || ||||||| |||| |||||||||||||
Sbjct 115860 TCCTTACCGTGGTTCTTGCGAAGGTCCAAGAACTCAAAGATGTCGGAGTGCCAGGGCTCC 115801
Query 245126 ATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCAC-CATCCTCTCGAG 245184
| ||||| ||||| || || || |||||||| || |||||||| || ||| | | |
Sbjct 115800 AGGTAGATAGCGAAAGCACCAGGGCGCTTGTTCCCGCCCTGGTCAACGTATCTTGCAGTG 115741
Query 245185 CGCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGAT 245244
|||||| | || || |||| || | ||||| || ||||| || || |||
Sbjct 115740 -TTGTTGAACACTCGAAGCATAGGGACAAGCCCGTTGGAAGTTCCGTTAGTACCACCGAT 115682
Query 245245 GTAGGCGCCCTTGCCCCTGA---GGTTGCTGATGGACATGCCTAGTCCGCCGGCGTGCTT 245301
||| | || | | | || ||| | | || | || | || || || |||
Sbjct 115681 GTAAGAACCTGTAGCACGGATACGGTGGACGTTG---AGACCAATACCACCCGCAGTCTT 115625
Query 245302 GGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCTGTCCGACTTCAT 245361
|||||| | ||| || |||| | |||||| || ||||| ||||||||| ||||||
Sbjct 115624 GGAGATCATGGCACAAGTCTTCAAGGTGTCATAGATACCCTCAATGCTGTCCTCCTTCAT 115565
Query 245362 GTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGTTGAACAGAGTGGG 245421
| || || |||||||||| |||||| |||| || | | | |||||||||||| ||
Sbjct 115564 ATCGATAAGGAAGCAGGAGGCCAGCTGCGGCTGAGGAGTACCGGCGTTGAACAGAGTCGG 115505
Query 245422 GCTGGCGTGGGTAAAGTA 245439
|||||| || |||||
Sbjct 115504 CGAGGCGTGAGTGAAGTA 115487
Score = 114 bits (126), Expect = 2e-20
Identities = 140/191 (73%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 244687 GGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAG 244746
||||| |||||| ||||| ||||| || | | ||||||| || ||||| ||||||||
Sbjct 116294 GGCCAAGTTGCAAACGGCGACCTCATCGGGGGCAGTGTACTCGATGATCTCAGTGCAGAG 116235
Query 244747 GTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTT 244806
|||| || ||| || ||||||| || || ||| ||| |||||| || |||||
Sbjct 116234 GTTAGAGCTGCGGATAGTACCCAGGTTCTTCTGGTTGCTCTTCTTGTTGCACGCATCCTT 116175
Query 244807 GTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTC 244866
||| ||||||||||| ||||||||| |||||| |||| | | | |||||| |
Sbjct 116174 GTACAGCATGAAGGGGTTACCGGTCTCGGTCTGGGCCTCGAGAATGGCATACCAGAGCTT 116115
Query 244867 CCTAGCCTTGA 244877
| ||||||||
Sbjct 116114 CTGAGCCTTGA 116104
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944329249025680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |