Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017 -02-15] 843 sequences; 47,573,060 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq657 242 7e-59 seq578 174 3e-38 >seq657 Length=446211 Score = 242 bits (268), Expect = 7e-59 Identities = 364/514 (71%), Gaps = 5/514 (1%) Strand=Plus/Minus Query 42633 CCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACG 42692 ||||||||| |||||||| |||||||| | ||||||| || || | || Sbjct 212292 CCCTGCATCCGCAAGAAGGCCGACTGGGCCATTCGCTGGATCCAGGACAAGGAGTCCACT 212233 Query 42693 TTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTC 42752 |||| | || | |||| ||||| | || || ||||| ||||||||||| ||| | ||| Sbjct 212232 TTCGCCCAGCGCTTGGTTGCCTTCGCTGCTGTTGAGGGTATCTTCTTCTCTGGCTCTTTC 212173 Query 42753 GCCTCCATCTTCTGGCTCAAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGA 42811 ||||| ||||||||||| ||| || || || ||||| || || |||||||| ||||| Sbjct 212172 GCCTCTATCTTCTGGCTGAAGAAGCGTGGCCTC-ATGCCTGGTCTGACCTTCTCTAACGA 212114 Query 42812 ACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCA 42871 || ||| | || ||||| ||||| | ||||| || || || |||||||| ||| Sbjct 212113 GCTGATCTCTCGTGATGAGGGTCTGCACACCGACTTCGCTTGTCTGCTGTTCTC---CCA 212057 Query 42872 CCTCAGGCACAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGAT 42931 ||| | || ||||| ||| ||| | |||||| || ||||| || || Sbjct 212056 CCTGAACAACCGCCCCTCACCTGAGGTTGTCGAGAAGATCATCGTTGATGCCGTCGACAT 211997 Query 42932 CGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCT 42991 ||| |||||||||| ||| | | || ||||| |||| | || |||||| | | || Sbjct 211996 TGAGCAGGAGTTCCTGACGGACGCCCTCCCCGTTGCCCTCCTTGGTATGAACTCCAAGCT 211937 Query 42992 CATGTGCAAGTACATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAGCCG 43051 ||||||| |||||||| ||| ||| ||||||| || ||| | | || || Sbjct 211936 CATGTGCCAGTACATCGAGTTCGTTGCCGACCGCCTGCTGGTCTCTCTTGGCAACAAGAA 211877 Query 43052 CCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGAC 43111 ||||||| | | |||||||||||| ||||| ||||||||| | | |||||||| Sbjct 211876 GTACTACAACGCCACAAACCCCTTCGACTTCATGGACAACATCTCGCTCGCTGGCAAGAC 211817 Query 43112 CAACTTTTTCGAGAAGCGCGTCGCCGACTACCAG 43145 |||||| ||||||||||| |||| ||||||||| Sbjct 211816 CAACTTCTTCGAGAAGCGTGTCGGTGACTACCAG 211783 Score = 118 bits (130), Expect = 2e-21 Identities = 207/298 (69%), Gaps = 5/298 (2%) Strand=Plus/Minus Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359 |||||| |||||||||||||| || ||| |||||| || |||||||| || ||| Sbjct 212687 ATCTGGCAGATGTACAAGAAGGCAGAGGCTTCCTTCTGGACTGCTGAGGAGATCGATCTG 212628 Query 42360 GCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGAG-AACGAAAAG---TTTTTCCTCAA 42415 |||||||| | || |||| | || | || | || || || | ||| || Sbjct 212627 TCCAAGGACCTGCACGACTGGAACA-ACCGCCTCAACAATGACGAGCGCTACTTCATCTC 212569 Query 42416 AAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAG 42475 | | ||||| ||||||||||| ||||||||||| ||||| |||||||| | | | Sbjct 212568 CCATGTCCTGGCTTTCTTCGCCGCGTCTGACGGCATCGTCAACGAGAACCTCGTCGAGCG 212509 Query 42476 GTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCAT 42535 |||| ||||| ||| | |||||| || ||||||||||| |||||||| || Sbjct 212508 TTTCAGTGGCGAGGTCCAGGTCCCTGAGGCTCGTTGCTTCTACGGTTTCCAGATCATGAT 212449 Query 42536 AGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCC 42593 |||||| | ||||| ||| ||| || || || |||| |||||| ||| ||| Sbjct 212448 GGAGAACATCCACTCCGAGACATACTCCCTTCTCATCGACACCTACATCAAGGAGCCC 212391 >seq578 Length=440600 Score = 174 bits (192), Expect = 3e-38 Identities = 305/438 (70%), Gaps = 12/438 (3%) Strand=Plus/Minus Query 245008 CTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTG--CTCG 245065 || ||||||||| ||||| |||||||||| | ||||||||| | || ||||| ||| Sbjct 115918 CTTCATGAAGAGATCGGGAGTCCAGAGGGCATAGAAGAGGTCAC--GTGCTCTGACCTCT 115861 Query 245066 TCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCC 245125 ||| || |||||| | || ||||| || ||||||| |||| ||||||||||||| Sbjct 115860 TCCTTACCGTGGTTCTTGCGAAGGTCCAAGAACTCAAAGATGTCGGAGTGCCAGGGCTCC 115801 Query 245126 ATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCAC-CATCCTCTCGAG 245184 | ||||| ||||| || || || |||||||| || |||||||| || ||| | | | Sbjct 115800 AGGTAGATAGCGAAAGCACCAGGGCGCTTGTTCCCGCCCTGGTCAACGTATCTTGCAGTG 115741 Query 245185 CGCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGAT 245244 |||||| | || || |||| || | ||||| || ||||| || || ||| Sbjct 115740 -TTGTTGAACACTCGAAGCATAGGGACAAGCCCGTTGGAAGTTCCGTTAGTACCACCGAT 115682 Query 245245 GTAGGCGCCCTTGCCCCTGA---GGTTGCTGATGGACATGCCTAGTCCGCCGGCGTGCTT 245301 ||| | || | | | || ||| | | || | || | || || || ||| Sbjct 115681 GTAAGAACCTGTAGCACGGATACGGTGGACGTTG---AGACCAATACCACCCGCAGTCTT 115625 Query 245302 GGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCTGTCCGACTTCAT 245361 |||||| | ||| || |||| | |||||| || ||||| ||||||||| |||||| Sbjct 115624 GGAGATCATGGCACAAGTCTTCAAGGTGTCATAGATACCCTCAATGCTGTCCTCCTTCAT 115565 Query 245362 GTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGTTGAACAGAGTGGG 245421 | || || |||||||||| |||||| |||| || | | | |||||||||||| || Sbjct 115564 ATCGATAAGGAAGCAGGAGGCCAGCTGCGGCTGAGGAGTACCGGCGTTGAACAGAGTCGG 115505 Query 245422 GCTGGCGTGGGTAAAGTA 245439 |||||| || ||||| Sbjct 115504 CGAGGCGTGAGTGAAGTA 115487 Score = 114 bits (126), Expect = 2e-20 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 244687 GGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAG 244746 ||||| |||||| ||||| ||||| || | | ||||||| || ||||| |||||||| Sbjct 116294 GGCCAAGTTGCAAACGGCGACCTCATCGGGGGCAGTGTACTCGATGATCTCAGTGCAGAG 116235 Query 244747 GTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTT 244806 |||| || ||| || ||||||| || || ||| ||| |||||| || ||||| Sbjct 116234 GTTAGAGCTGCGGATAGTACCCAGGTTCTTCTGGTTGCTCTTCTTGTTGCACGCATCCTT 116175 Query 244807 GTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTC 244866 ||| ||||||||||| ||||||||| |||||| |||| | | | |||||| | Sbjct 116174 GTACAGCATGAAGGGGTTACCGGTCTCGGTCTGGGCCTCGAGAATGGCATACCAGAGCTT 116115 Query 244867 CCTAGCCTTGA 244877 | |||||||| Sbjct 116114 CTGAGCCTTGA 116104 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944329249025680