Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017 -02-15] 843 sequences; 47,573,060 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq744 122 2e-22 seq657 113 1e-19 >seq744 Length=38458 Score = 122 bits (134), Expect = 2e-22 Identities = 324/480 (68%), Gaps = 20/480 (4%) Strand=Plus/Minus Query 243286 TCATTTGCTGAGCGTCTCGTCGCCTGGGTGTGC-GTTGAAGGTATTCTGTTTTCCGGGAG 243344 || |||||||||||||| || |||| | ||| || ||||||||| | || || || Sbjct 30996 TCTTTTGCTGAGCGTCTTGTTGCCTTTGC-TGCTGTCGAAGGTATTTTCTTCTCTGGTTC 30938 Query 243345 TTTCTGCG-CCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCT- 243402 || ||| |||| |||||||| ||| ||| |||||||||| | | | || Sbjct 30937 CTT-TGCTTCCATTTTTTGGCTCAAGAAACGTGGTTTGATGCCTGGTTT--GACATTCAG 30881 Query 243403 -AACGAGTTCATCAGTCGCGACGAGGGCCTTCACCAACAGTTCGGTGAGCTTATGTATTC 243461 || || || ||| |||| || || |||||||| | || | | ||| | | | | Sbjct 30880 CAATGAATTGATCTGTCGTGATGAAGGCCTTCATACTGACTTTGCTTGTCTTTTATTTAC 30821 Query 243462 AAAGCTCCAGAA-CAAGCTA-CCATTCGAAACGGTCAAACAAATCATCACAGAAGCAGTT 243519 | || | || | ||| ||| ||| ||||| | |||||| ||||| || Sbjct 30820 CCATCTTCGTAAGCGTCCTAGCCAA--GAACGCGTCAAGGATATCATCTTGGAAGCTGTC 30763 Query 243520 GAAAACGAAAAGGAATTCATTTGC--GACGCTATTCCA--TGCCGGCTTATTGGCATGAA 243575 | ||| ||||||| |||| || ||| |||| ||| || || |||||||| Sbjct 30762 AGCATTGAACAGGAATT--TTTGACGGATGCTCTTCCCGTTGCT--CTCATCGGCATGAA 30707 Query 243576 CTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGG 243635 |||| | ||| | || |||||||||||||| || || || | | | || ||||| Sbjct 30706 TTCTGCTTTGATGTGCCAATACATCGAATTCGTTGCTGATCGTCTCATGGTTGCTCTTGG 30647 Query 243636 TTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCA 243695 | ||| || | |||| | | || || |||| ||||||||| | || || ||||| Sbjct 30646 ATTTGACAAGATTTACATGGCTACCAATCCATTTGACTTTATGGACATGATCTCTCTTCA 30587 Query 243696 AGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCAACGCCCTGGTGTGATGAA 243755 ||| || || |||||||| |||||||||||| ||| |||||||| ||||||| ||||| Sbjct 30586 AGGCAAGACCAACTTCTTTGAAAAGCGTGTCTCTGACTATCAACGTGCTGGTGTCATGAA 30527 >seq657 Length=446211 Score = 113 bits (124), Expect = 1e-19 Identities = 140/189 (74%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 243566 TTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCA 243625 |||| |||||||| | |||||| | ||||||||||| ||||| ||||||||| | | Sbjct 211955 TTGGTATGAACTCCAAGCTCATGTGCCAGTACATCGAGTTCGTTGCCGACCGCCTGCTGG 211896 Query 243626 TCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCA 243685 || | ||||| | |||| |||||| ||| |||||||| | ||| ||||| || Sbjct 211895 TCTCTCTTGGCAACAAGAAGTACTACAACGCCACAAACCCCTTCGACTTCATGGACAACA 211836 Query 243686 TTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCA-ACGCCCT 243744 | ||||| || || || ||||||||||| ||||||||| |||| || || | | || Sbjct 211835 TCTCGCTCGCTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTACCAGAAGGCC- 211777 Query 243745 GGTGTGATG 243753 ||||| ||| Sbjct 211776 GGTGTCATG 211768 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102868087862050