Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017 -02-15] 843 sequences; 47,573,060 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq578 116 4e-21 seq657 107 2e-18 seq347 107 2e-18 seq268 107 2e-18 seq744 100 3e-16 seq219 95.1 1e-14 >seq578 Length=440600 Score = 116 bits (128), Expect = 4e-21 Identities = 402/619 (65%), Gaps = 16/619 (3%) Strand=Plus/Minus Query 114702 TTGTG-TAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCT 114760 ||||| || || || |||||||| || || | | || || || || || |||| || | Sbjct 116016 TTGTGGTACAGAGCCTCAAACTCATCGCCATAGACATCAGAAAGACCGGGAGCCTCATTT 115957 Query 114761 GGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATC 114820 |||||||| || | ||| | ||| ||||||||||||||||||||| || || || Sbjct 115956 GGGCAGAATAGGGTCCAGTCACCGTTAGACTCAACACGCTTCATGAAGAGATCGGGAGTC 115897 Query 114821 CAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAAC 114880 ||||| || ||||||| || || | | ||||| | || || || || | Sbjct 115896 CAGAGGGCATAGAAGAGGTCACGTGCTCTGACCTCTTCCTTACCGTGGTTCTTGCGAAGG 115837 Query 114881 TCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTA 114940 ||||| || || | ||| || | |||||| || |||||||| | |||| | || | Sbjct 115836 TCCAAGAACTCAAAGATGTCGGAGTGCCAGGGCTCCAGGTAGATAGCGAAAGCACC---A 115780 Query 114941 CGACG------ACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATT 114994 | || || |||||| || || || || ||| || || || |||||||| Sbjct 115779 GGGCGCTTGTTCCCGCCCTGGTCAACGTATCTTGCAGTGTTGTTGAACACTCGAAGCATA 115720 Query 114995 GGAATGATACCATCAGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTATTGGCTCTGA 115052 || | | || | || || || || || |||| || || || | || | || Sbjct 115719 GGGACAAGCCCGTTGGAAGTTCCGTTAGTACCACCGATGTAAGAACCT--GTAGCACGGA 115662 Query 115053 CATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGA 115112 | |||| || | ||||||||| || || ||| ||||| || || | | | Sbjct 115661 TACGGTGGACGTTGAGACCAATACCACCCGCAGTCTTGGAGATCATGGCACAAGTCTTCA 115602 Query 115113 GACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACA 115172 || | ||||| || || || ||| |||| | |||||||||||||| | || Sbjct 115601 AGGTGTCATAGATACCCTCAATGCTGTCCTCCTTCATATCGATAAGGAAGCAGGAGGCCA 115542 Query 115173 TTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAA-CATACCT 115231 || ||| || ||||| |||||||| || || || | ||||| |||| || | Sbjct 115541 GCTGCGGCTGAGGAGTACCGGCGTTGAACAGAGTCGGCGAGGCGTGAGTGAAGTATTTC- 115483 Query 115232 TGGGACATCTTATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATC 115291 ||||||||| || ||||||||| | || | ||| || ||||| || |||| | Sbjct 115482 TGGGACATCAGATTGTAGGTCTCGATAACCTTCTCGAGGTCATCACCGTGGATTCCGACC 115423 Query 115292 GAGACCCGCATAAACATGT 115310 | || ||||||| ||||| Sbjct 115422 GCAACACGCATAATCATGT 115404 Score = 84.2 bits (92), Expect = 3e-11 Identities = 105/144 (73%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 114510 CAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTT 114569 |||||||||| || || || || || | || || || || || |||| |||||| | Sbjct 116262 CAGTGTACTCGATGATCTCAGTGCAGAGGTTAGAGCTGCGGATAGTACCCAGGTTCTTCT 116203 Query 114570 GATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTT 114629 | || ||| |||| |||||||||||||| |||||| | || | || ||||| || | Sbjct 116202 GGTTGCTCTTCTTGTTGCACGCATCCTTGTACAGCATGAAGGGGTTACCGGTCTCGGTCT 116143 Query 114630 GGGACTTGAGAATAGCCTTCCAGA 114653 ||| || |||||| || | ||||| Sbjct 116142 GGGCCTCGAGAATGGCATACCAGA 116119 >seq657 Length=446211 Score = 107 bits (118), Expect = 2e-18 Identities = 290/439 (66%), Gaps = 16/439 (4%) Strand=Plus/Plus Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817 |||||| || || ||||||||||||||||| ||||| || | | ||| || ||||| Sbjct 211786 GTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCGAGCGAGATGTTGTCCAT 211845 Query 125818 AAAATCAAATGGGTTCTTTGAGTTCCA--AATTGTTGGCACCCCAATCTGTTTGAGGAGA 125875 || || || ||||| | | ||| | | || ||| || || || || Sbjct 211846 GAAGTCGAAGGGGTTTGTGGCGTTGTAGTACTTCTTGTTGCC--AAGAGAGACCAGCAGG 211903 Query 125876 CGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTA 125935 || || | ||| |||| ||||||| |||| || ||||||||||| | |||| | Sbjct 211904 CGGTCGGCAACGAACTCGATGTACTGGCACATGAGCTTGGAGTTCATACCAAGGAGGGCA 211963 Query 125936 CATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATGGCG 125995 ||||| |||||| | |||| ||| |||||| || ||||| || |||||| Sbjct 211964 ACGGGGAGGGCGTCCGTCAGGAACTCCTGCTCAATGTCGACGGCATCA---ACGATGATC 212020 Query 125996 TGAATGGTGTCCACCCCAGGTCTATTGCGCAAAGTC---TTGAAGAGTTCCACG---GCA 126049 | | | | ||| ||||| ||| || | | ||| || || Sbjct 212021 T---TCTCGACAACCTCAGGTGAGGGGCGGTTGTTCAGGTGGGAGAACAGCAGACAAGCG 212077 Query 126050 AACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGC 126109 || || ||| |||||||| ||||| ||||| || || || |||||| ||| || ||| Sbjct 212078 AAGTCGGTGTGCAGACCCTCATCACGAGAGATCAGCTCGTTAGAGAAGGTCAGACCAGGC 212137 Query 126110 ATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCC 126169 ||||| || |||||||||| |||||| || | || || || ||||||||||| ||| Sbjct 212138 ATGAGGCCACGCTTCTTCAGCCAGAAGATAGAGGCGAAAGAGCCAGAGAAGAAGATACCC 212197 Query 126170 TCCACACACGCGAACGCAA 126188 || ||| ||||| |||| Sbjct 212198 TCAACAGCAGCGAAGGCAA 212216 >seq347 Length=15602 Score = 107 bits (118), Expect = 2e-18 Identities = 206/304 (68%), Gaps = 0/304 (0%) Strand=Plus/Minus Query 172599 AGTGGATCATATTCAGGATGAGACCCTTAATGTGTGAACCATCGTTATCCGCATCCGTCA 172658 ||| ||| | || | ||| |||||||| || ||||||||||| | ||| ||| |||| Sbjct 5268 AGTCGATAAAGTTGATGATCAGACCCTTGATATGTGAACCATCATGATCTTGATCTGTCA 5209 Query 172659 TAATCATAAGCCGACCATAGCGAAGCTCGGAAACATCTTGATACTCCTTACCCTGTTGAA 172718 | ||||| | |||||||| || | ||| |||| || ||||| ||||| || |||| Sbjct 5208 TGATCATCAAACGACCATATCGTAACTCATCAACACTTTCATACTTTTTACCATGCTGAA 5149 Query 172719 GACCCAAGATCTTCTTGAGATCATTGAACTCTTGGTTTGATGTGAGTTGCGCCACTGAAG 172778 |||| | || ||||| | |||| |||| || |||||| || ||| Sbjct 5148 GACCAAGAATAGCCTTGATGTTTTTGATTTCTTCATTCTTCATGAGTTCAGCATTAGAAA 5089 Query 172779 CATCGCGGACATTTTTACACTTCCCACGGAGAGGGAACACACCGTAGTGATCACGACCAA 172838 |||| || || || || ||||| | ||||| ||||| |||| |||||||||| Sbjct 5088 CATCACGAACGTTCAATAGTTTACCACGAATGGGGAAAACACCATAGTAGTCACGACCAA 5029 Query 172839 CCACAGAAAGACCAGCAACTGCGAGGGTCTTCGCGGAATCACCCTCCGTCACGATGAGCG 172898 | || || | |||| | | || | ||| || |||||||| || || | || || | Sbjct 5028 CTACTGACATACCACTCAAGACAAGCGACTTGGCTGAATCACCTTCTGTGATTATCAGAG 4969 Query 172899 TACA 172902 |||| Sbjct 4968 TACA 4965 >seq268 Length=14648 Score = 107 bits (118), Expect = 2e-18 Identities = 206/304 (68%), Gaps = 0/304 (0%) Strand=Plus/Minus Query 172599 AGTGGATCATATTCAGGATGAGACCCTTAATGTGTGAACCATCGTTATCCGCATCCGTCA 172658 ||| ||| | || | ||| |||||||| || ||||||||||| | ||| ||| |||| Sbjct 5310 AGTCGATAAAGTTGATGATCAGACCCTTGATATGTGAACCATCATGATCTTGATCTGTCA 5251 Query 172659 TAATCATAAGCCGACCATAGCGAAGCTCGGAAACATCTTGATACTCCTTACCCTGTTGAA 172718 | ||||| | |||||||| || | ||| |||| || ||||| ||||| || |||| Sbjct 5250 TGATCATCAAACGACCATATCGTAACTCATCAACACTTTCATACTTTTTACCATGCTGAA 5191 Query 172719 GACCCAAGATCTTCTTGAGATCATTGAACTCTTGGTTTGATGTGAGTTGCGCCACTGAAG 172778 |||| | || ||||| | |||| |||| || |||||| || ||| Sbjct 5190 GACCAAGAATAGCCTTGATGTTTTTGATTTCTTCATTCTTCATGAGTTCAGCATTAGAAA 5131 Query 172779 CATCGCGGACATTTTTACACTTCCCACGGAGAGGGAACACACCGTAGTGATCACGACCAA 172838 |||| || || || || ||||| | ||||| ||||| |||| |||||||||| Sbjct 5130 CATCACGAACGTTCAATAGTTTACCACGAATGGGGAAAACACCATAGTAGTCACGACCAA 5071 Query 172839 CCACAGAAAGACCAGCAACTGCGAGGGTCTTCGCGGAATCACCCTCCGTCACGATGAGCG 172898 | || || | |||| | | || | ||| || |||||||| || || | || || | Sbjct 5070 CTACTGACATACCACTCAAGACAAGCGACTTGGCTGAATCACCTTCTGTGATTATCAGAG 5011 Query 172899 TACA 172902 |||| Sbjct 5010 TACA 5007 >seq744 Length=38458 Score = 100 bits (110), Expect = 3e-16 Identities = 182/262 (69%), Gaps = 7/262 (3%) Strand=Plus/Plus Query 126059 TGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCC 126118 || || || || ||||| |||| | |||||| ||| || || ||||| | ||| Sbjct 30848 TGAAGGCCTTCATCACGACAGATCAATTCATTGCTGAATGTCAAACCAGGCATCAAACCA 30907 Query 126119 CGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACAC 126178 || ||||| | ||| ||||| | | ||| ||||| |||||||| || || || ||| Sbjct 30908 CGTTTCTTGAGCCAAAAAATGGAAGCAAAGGAACCAGAGAAGAAAATACCTTCGACAGCA 30967 Query 126179 GCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTCAAACCACTTCATCGCC 126238 || || |||| |||||||||||||| || | || || | | || |||||| | ||| Sbjct 30968 GCAAAGGCAACAAGACGCTCAGCAAAAGAAC-CG--TTAGAGGAAATCCACTTGAAGGCC 31024 Query 126239 CACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCCTTCTTT 126298 || | |||||| | | |||||| |||| || | || || |||||| | || || Sbjct 31025 CAATCAGCCTTTCTTTTGATACAAGGGATAGTGTCAATAGCAGAAAAGAG--CATTTCTT 31082 Query 126299 TCTGATGG--ATCTTTGATGTA 126318 ||| ||| ||||||||| || Sbjct 31083 TCTCTTGGTTATCTTTGATATA 31104 >seq219 Length=30711 Score = 95.1 bits (104), Expect = 1e-14 Identities = 258/395 (65%), Gaps = 0/395 (0%) Strand=Plus/Plus Query 8526 TATCAAGCATCTTCCTCGGAGATGTTTGGTAAAGTTAGGGAATCCCCTCAAAATGAGGAG 8585 |||||||| ||| |||| || | | ||||||||| ||| | || ||||| || Sbjct 12746 TATCAAGCTTCTACCTCTGAACTCTATGGTAAAGTAGTTGAAACACCCCAAAAGGAAACA 12805 Query 8586 ACACCCTTCTATCCACGATCCGTCTATGGCGTCTCAAAGGTTGCGGCACATTGGCTCGTG 8645 |||||||||||||| || ||| ||||| || | ||| || | ||||| | | Sbjct 12806 ACACCCTTCTATCCCCGTTCCCCTTATGGTGTAGCCAAGCTTTATGGTTATTGGATTACG 12865 Query 8646 AAGAATTACCGAGAATCCTATGGTCTCTTTGCGTGCTCCGGTATTCTCTTCAACCACGAG 8705 || ||||| ||||| || | | ||||| || |||||||| |||||||| || Sbjct 12866 GTCAACTACCGTGAATCATACAATATGTTTGCCTGTAATGGTATTCTATTCAACCATGAA 12925 Query 8706 TCACCCCGTCGTGGCCCGGATTTCGTGACAAAGAAGATCACCGATGGTATCAAACAAATC 8765 ||||| |||||||||| ||||| || ||||| || || | || | | ||| Sbjct 12926 TCACCTCGTCGTGGCCGTACCTTCGTTACCCGAAAGATTACTCGTGCTGTCGCAGATATC 12985 Query 8766 GTCGCGGGTGAGAGGGAGTTCATTGAATTGGGGAACCTCAACGCCGAGAGGGACTGGGGA 8825 | ||| |||| | || | | || || | | || || | || |||||| Sbjct 12986 CACTTGGGACGTCAAGAGTGCCTTTATCTCGGTAATATTGATGCTAAGCGTGATTGGGGA 13045 Query 8826 CACGCCAAGGACTATGTTGAAGCCATGTGGCTCGTACTTCAACAAGAAGAGGCGGACGAA 8885 || || || ||||| |||| ||||||||| | || || ||||| || | | || Sbjct 13046 CATGCTCGTGATTATGTCGAAGGTATGTGGCTCATGCTGCAGCAAGATCAGCCTCAAGAT 13105 Query 8886 TATGTCGTCGCGACGGGGGAGACACACTCCGTCAG 8920 | ||| | || || || || |||||| | ||||| Sbjct 13106 TTCGTCTTGGCTACTGGTGAAACACACACAGTCAG 13140 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597347305386440