Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017 -02-15] 843 sequences; 47,573,060 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq810 102 9e-17 seq812 96.9 4e-15 >seq810 Length=1034423 Score = 102 bits (112), Expect = 9e-17 Identities = 134/183 (73%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 42019 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 42078 |||| || || ||||| || |||||| || | || || |||||||| || ||||| | Sbjct 583011 CCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCTTCGAGCTGCTTTCCGGCGAAGA 582952 Query 42079 TGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 42138 | || ||||||||||| | || | || |||||||||| ||| || |||| ||| | Sbjct 582951 TCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGTTG 582893 Query 42139 -CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 42197 | | ||||||| ||| || ||||||| || ||||| || ||||| || ||||| || Sbjct 582892 TCGATCGTGTCGGACGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 582833 Query 42198 AAG 42200 ||| Sbjct 582832 AAG 582830 >seq812 Length=913560 Score = 96.9 bits (106), Expect = 4e-15 Identities = 146/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 |||||| | | ||| | ||||| |||| ||| |||||| || || ||||| |||| Sbjct 529208 ACCTCCACGAAGACGGAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGA 529267 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || || || |||| || |||||||| |||||||| ||||| ||||||||||| | || Sbjct 529268 GAGCGTGCGACCGTCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCAGGAGG 529327 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCA 42159 | | |||||||||| ||| || |||| ||| | | | ||||| || || | Sbjct 529328 GATACCCTCCTTGTCCTGGATCTTGCTCTTGA-CGTTGTCGATGGTGTCCGAGGACTCGA 529386 Query 42160 CATCGACCGTGATGGTTTTGCCCGT 42184 | |||| |||||||| || || || Sbjct 529387 CCTCGAGGGTGATGGTCTTTCCAGT 529411 Score = 91.5 bits (100), Expect = 2e-13 Identities = 137/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||| || || ||||| || | || || || |||| || |||||||||||||| || Sbjct 528561 TCCTTCTGGATGTTGTAGTCGGACAAGGTACGACCGTCCTCCAGCTGCTTACCAGCAAAG 528620 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 || || ||||||||||| | || | | ||||||| | ||| | || | | ||| Sbjct 528621 ATCAGGCGCTGCTGGTCAGGAGGGATACCTTCCTTGT-CTTGAATCTTGCTCTTCACGTT 528679 Query 42138 G-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | | |||||||| ||||| || || | ||||| || ||||| || | ||||| || Sbjct 528680 GTCAATTGTGTCGCTGGATTCAACCTCCAATGTGATAGTCTTGCCAGTCAAAGTCTTAAC 528739 Query 42197 AAAGATTTGCAT 42208 ||| || ||||| Sbjct 528740 AAAAATCTGCAT 528751 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543207075895120