Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017
-02-15] 843 sequences; 47,573,060 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq810 102 9e-17
seq812 96.9 4e-15
>seq810
Length=1034423
Score = 102 bits (112), Expect = 9e-17
Identities = 134/183 (73%), Gaps = 2/183 (1%)
Strand=Plus/Minus
Query 42019 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 42078
|||| || || ||||| || |||||| || | || || |||||||| || ||||| |
Sbjct 583011 CCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCTTCGAGCTGCTTTCCGGCGAAGA 582952
Query 42079 TGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 42138
| || ||||||||||| | || | || |||||||||| ||| || |||| ||| |
Sbjct 582951 TCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGTTG 582893
Query 42139 -CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 42197
| | ||||||| ||| || ||||||| || ||||| || ||||| || ||||| ||
Sbjct 582892 TCGATCGTGTCGGACGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 582833
Query 42198 AAG 42200
|||
Sbjct 582832 AAG 582830
>seq812
Length=913560
Score = 96.9 bits (106), Expect = 4e-15
Identities = 146/205 (71%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040
|||||| | | ||| | ||||| |||| ||| |||||| || || ||||| ||||
Sbjct 529208 ACCTCCACGAAGACGGAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGA 529267
Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
|| || || |||| || |||||||| |||||||| ||||| ||||||||||| | ||
Sbjct 529268 GAGCGTGCGACCGTCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCAGGAGG 529327
Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCA 42159
| | |||||||||| ||| || |||| ||| | | | ||||| || || |
Sbjct 529328 GATACCCTCCTTGTCCTGGATCTTGCTCTTGA-CGTTGTCGATGGTGTCCGAGGACTCGA 529386
Query 42160 CATCGACCGTGATGGTTTTGCCCGT 42184
| |||| |||||||| || || ||
Sbjct 529387 CCTCGAGGGTGATGGTCTTTCCAGT 529411
Score = 91.5 bits (100), Expect = 2e-13
Identities = 137/192 (71%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077
||||| || || ||||| || | || || || |||| || |||||||||||||| ||
Sbjct 528561 TCCTTCTGGATGTTGTAGTCGGACAAGGTACGACCGTCCTCCAGCTGCTTACCAGCAAAG 528620
Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137
|| || ||||||||||| | || | | ||||||| | ||| | || | | |||
Sbjct 528621 ATCAGGCGCTGCTGGTCAGGAGGGATACCTTCCTTGT-CTTGAATCTTGCTCTTCACGTT 528679
Query 42138 G-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196
| | | |||||||| ||||| || || | ||||| || ||||| || | ||||| ||
Sbjct 528680 GTCAATTGTGTCGCTGGATTCAACCTCCAATGTGATAGTCTTGCCAGTCAAAGTCTTAAC 528739
Query 42197 AAAGATTTGCAT 42208
||| || |||||
Sbjct 528740 AAAAATCTGCAT 528751
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543207075895120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |