Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017
-02-15] 843 sequences; 47,573,060 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq812 127 2e-24
seq609 98.7 1e-15
>seq812
Length=913560
Score = 127 bits (140), Expect = 2e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || |||| | || || || || | || || || || |||||||||||||| |
Sbjct 528752 ACCACCACGCAGGCGGAGGACAAGGTGGAGAGTAGACTCCTTCTGAATGTTGTAATCGGA 528811
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| |||||| | ||||| | |||||| || ||| | || || |||||||||||||||||
Sbjct 528812 CAAGGTGCGGCCATCTTCCAACTGCTTACCAGCAAAGATAAGACGCTGCTGGTCGGGAGG 528871
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
|| |||||||| ||||| || || ||| || || | ||||| | || ||
Sbjct 528872 GATGCCTTCTTTATCTTGGATCTTGCTCTTGACGTTATCGATGGTATCTGACGATTCGAC 528931
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
||| | ||| | ||||||||||||| ||| || |||||||| |||||
Sbjct 528932 TTCCAGAGTAATAGTCTTGCCGGTCAGAGTCTTGACGAAAATCTGCAT 528979
Score = 107 bits (118), Expect = 2e-18
Identities = 142/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| ||||| || || |||||||| || | | ||| || |||| || |||||||| ||
Sbjct 528555 GTAGATTCCTTCTGGATGTTGTAGTCGGACAAGGTACGACCGTCCTCCAGCTGCTTACCA 528614
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
||| | || || ||||||||||| ||||| || ||||| || ||||| || || |||
Sbjct 528615 GCAAAGATCAGGCGCTGCTGGTCAGGAGGGATACCTTCCTTGTCTTGAATCTTGCTCTTC 528674
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
|| || | ||| || | || || || || | || | |||||||| ||||||||
Sbjct 528675 ACGTTGTCAATTGTGTCGCTGGATTCAACCTCCAATGTGATAGTCTTGCCAGTCAAAGTC 528734
Query 64427 TTTACGAAAATTTGCAT 64443
|| || ||||| |||||
Sbjct 528735 TTAACAAAAATCTGCAT 528751
Score = 82.4 bits (90), Expect = 8e-11
Identities = 95/128 (74%), Gaps = 0/128 (0%)
Strand=Plus/Plus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||| || || | || || || || || |||||||| || | || ||||| ||||
Sbjct 529224 AGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGCGTGCGACCGTCC 529283
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
||||||||||| || || | ||||| ||||||||||| ||||| || || || || ||
Sbjct 529284 TCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCC 529343
Query 64352 TGTATTTT 64359
|| || ||
Sbjct 529344 TGGATCTT 529351
>seq609
Length=32548
Score = 98.7 bits (108), Expect = 1e-15
Identities = 99/129 (77%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300
|||| || ||||| ||||||||||||||||| | ||| || ||||||| || ||
Sbjct 20995 TGAAGGGTAGATTCCTTTTGAATGTTGTAATCACTCAAGGTACGACCGTCTTCGAGTTGT 20936
Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360
|| ||||| ||||||| || || || || ||||| || ||||| || ||||| || |||
Sbjct 20935 TTACCGGCGAAAATGAGACGTTGTTGATCAGGAGGGATACCTTCCTTATCTTGGATCTTT 20876
Query 64361 TGCTTTACA 64369
||||| |||
Sbjct 20875 TGCTTGACA 20867
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499639534992920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |