Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017 -02-15] 843 sequences; 47,573,060 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq578 196 5e-45 >seq578 Length=440600 Score = 196 bits (216), Expect = 5e-45 Identities = 449/673 (67%), Gaps = 10/673 (1%) Strand=Plus/Plus Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774 || ||| | ||||| | ||||| |||||||| ||||| || ||| || |||| Sbjct 115322 AACTACCAATACTTCGGATTCAAGACTCTGGAACGATCGTATCTGCTCCGCATCAATGGA 115381 Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834 | |||| | ||||| || || || || | ||||| || || |||| || ||||| | Sbjct 115382 AAGGTTGCTGAGCGTCCTCAGCACATGATTATGCGTGTTGCGGTCGGAATCCACGGTGAT 115441 Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATG--- 93891 ||| | ||| ||| | | | | || | || | | ||| || || Sbjct 115442 GACCTCGAGAAGGTTATCGAGACCTACA---ATCTGATGTCCCAGAAATACTTCACTCAC 115498 Query 93892 GCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTG 93951 ||| | ||||| ||||||||||| || || || ||| ||| || | || || ||||| Sbjct 115499 GCCTCGCCGACTCTGTTCAACGCCGGTACTCCTCAGCCGCAGCTGGCCTCCTGCTTCCTT 115558 Query 93952 ATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACC 94011 || | |||| ||| ||| || || | |||| | | ||| ||||| | Sbjct 115559 ATCGATATGAAGGAGGACAGCATTGAGGGTATCTATGACACCTTGAAGACTTGTGCCATG 115618 Query 94012 ATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTA--CGTGCCAGGGGTT 94069 ||||| || ||||| || || || ||| |||||| |||| ||||| | |||| Sbjct 115619 ATCTCCAAGACTGCGGGTGGTATTGGTCTCAACGTCCAC--CGTATCCGTGCTACAGGTT 115676 Query 94070 CCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCA 94129 | |||||| | ||||| || || || |||||||| || ||||||||||| || || |||| Sbjct 115677 CTTACATCGGTGGTACTAACGGAACTTCCAACGGGCTTGTCCCTATGCTTCGAGTGTTCA 115736 Query 94130 ACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCT 94189 ||||| | || | ||||| |||||||| || | | | ||| ||||||| ||| Sbjct 115737 ACAACACTGCAAGATACGTTGACCAGGGCGGGAACAAGCGCCCTGGTGCTTTCGCTATCT 115796 Query 94190 ATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCA 94249 | || |||||||||||| | ||| | | ||| | ||||| || ||||||||||| | Sbjct 115797 ACCTGGAGCCCTGGCACTCCGACATCTTTGAGTTCTTGGACCTTCGCAAGAACCACGGTA 115856 Query 94250 ACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGA 94309 | || || || || | ||||||||||| || |||||| || || || || |||| Sbjct 115857 AGGAAGAGGTCAGAGCACGTGACCTCTTCTATGCCCTCTGGACTCCCGATCTCTTCATGA 115916 Query 94310 AACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGT 94369 | || || ||| ||| | ||||| || || || || ||||| |||||| || | Sbjct 115917 AGCGTGTTGAGTCTAACGGTGACTGGACCCTATTCTGCCCAAATGAGGCTCCCGGTCTTT 115976 Query 94370 CCGACGTTTGTGG 94382 | || || | ||| Sbjct 115977 CTGATGTCTATGG 115989 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494717986854280