Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017
-02-15] 843 sequences; 47,573,060 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq578 196 5e-45
>seq578
Length=440600
Score = 196 bits (216), Expect = 5e-45
Identities = 449/673 (67%), Gaps = 10/673 (1%)
Strand=Plus/Plus
Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774
|| ||| | ||||| | ||||| |||||||| ||||| || ||| || ||||
Sbjct 115322 AACTACCAATACTTCGGATTCAAGACTCTGGAACGATCGTATCTGCTCCGCATCAATGGA 115381
Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834
| |||| | ||||| || || || || | ||||| || || |||| || ||||| |
Sbjct 115382 AAGGTTGCTGAGCGTCCTCAGCACATGATTATGCGTGTTGCGGTCGGAATCCACGGTGAT 115441
Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATG--- 93891
||| | ||| ||| | | | | || | || | | ||| || ||
Sbjct 115442 GACCTCGAGAAGGTTATCGAGACCTACA---ATCTGATGTCCCAGAAATACTTCACTCAC 115498
Query 93892 GCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTG 93951
||| | ||||| ||||||||||| || || || ||| ||| || | || || |||||
Sbjct 115499 GCCTCGCCGACTCTGTTCAACGCCGGTACTCCTCAGCCGCAGCTGGCCTCCTGCTTCCTT 115558
Query 93952 ATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACC 94011
|| | |||| ||| ||| || || | |||| | | ||| ||||| |
Sbjct 115559 ATCGATATGAAGGAGGACAGCATTGAGGGTATCTATGACACCTTGAAGACTTGTGCCATG 115618
Query 94012 ATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTA--CGTGCCAGGGGTT 94069
||||| || ||||| || || || ||| |||||| |||| ||||| | ||||
Sbjct 115619 ATCTCCAAGACTGCGGGTGGTATTGGTCTCAACGTCCAC--CGTATCCGTGCTACAGGTT 115676
Query 94070 CCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCA 94129
| |||||| | ||||| || || || |||||||| || ||||||||||| || || ||||
Sbjct 115677 CTTACATCGGTGGTACTAACGGAACTTCCAACGGGCTTGTCCCTATGCTTCGAGTGTTCA 115736
Query 94130 ACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCT 94189
||||| | || | ||||| |||||||| || | | | ||| ||||||| |||
Sbjct 115737 ACAACACTGCAAGATACGTTGACCAGGGCGGGAACAAGCGCCCTGGTGCTTTCGCTATCT 115796
Query 94190 ATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCA 94249
| || |||||||||||| | ||| | | ||| | ||||| || ||||||||||| |
Sbjct 115797 ACCTGGAGCCCTGGCACTCCGACATCTTTGAGTTCTTGGACCTTCGCAAGAACCACGGTA 115856
Query 94250 ACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGA 94309
| || || || || | ||||||||||| || |||||| || || || || ||||
Sbjct 115857 AGGAAGAGGTCAGAGCACGTGACCTCTTCTATGCCCTCTGGACTCCCGATCTCTTCATGA 115916
Query 94310 AACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGT 94369
| || || ||| ||| | ||||| || || || || ||||| |||||| || |
Sbjct 115917 AGCGTGTTGAGTCTAACGGTGACTGGACCCTATTCTGCCCAAATGAGGCTCCCGGTCTTT 115976
Query 94370 CCGACGTTTGTGG 94382
| || || | |||
Sbjct 115977 CTGATGTCTATGG 115989
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494717986854280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |