Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017 -02-15] 843 sequences; 47,573,060 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq657 141 9e-29 seq812 116 4e-21 seq609 107 2e-18 seq810 93.3 4e-14 seq744 82.4 8e-11 >seq657 Length=446211 Score = 141 bits (156), Expect = 9e-29 Identities = 352/527 (67%), Gaps = 33/527 (6%) Strand=Plus/Minus Query 52326 GTGCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGACACCG-- 52383 || || ||| | ||||| ||||| | ||||| || |||||| || |||| | Sbjct 212295 GTTCCCTGCATCCGCAAGAAGGCCGACTGGGCCATTCGCTGGATCCAG---GACAAGGAG 212239 Query 52384 -CCACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGC 52442 |||| | ||| ||||| |||| |||||||| || ||||| | || || || ||| Sbjct 212238 TCCACTTTCGCCCAGCGCTTGGTTGCCTTCGCTGCTGTTGAGGGTATCTTCTTCTCTGGC 212179 Query 52443 AGCTTTGCCGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGC 52502 || ||| | ||||| | | || | | ||| | ||||| || ||||| ||| Sbjct 212178 TCTTTCGCCTCTATCTTCTGGCTGAAGAAGCGTGGCCTCATGCCTGGTCTGACCTTCTCT 212119 Query 52503 AACGAGTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCT------CTAC 52556 |||||| |||| || || || || || |||||||| ||||| || || || || | Sbjct 212118 AACGAGCTGATCTCTCGTGATGAGGGTCTGCACACCGACTTCGCTTGTCTGCTGTTCTCC 212059 Query 52557 TACAAGA-----CGCGCGTGACCGAAAAATTGGATTCGGACACGATCCTGAGCATGTTCA 52611 || || ||| | | ||| | ||| ||| | | |||| | ||| Sbjct 212058 CACCTGAACAACCGCCCCTCACCTGAGG-TTG---TCG-AGAAGATCATC-----GTT-- 212011 Query 52612 AGGAGGCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGG 52671 || || || | || || ||||||| | |||| ||| || || || | || || | Sbjct 212010 --GATGCCGTCGACATTGAGCAGGAGTTCCTGACGGACGCCCTCCCCGTTGCCCTCCTTG 211953 Query 52672 GCATGAACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGC 52731 | |||||| | || ||||||| ||||||||||||| || || || || ||| |||| Sbjct 211952 GTATGAACTCCAAGCTCATGTGCCAGTACATCGAGTTCGTTGCCGACCGCCTGCTGGTCT 211893 Query 52732 AGCTCGGGCAGCCA-AAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATT 52790 || || || | | ||||||| |||||| || || || || || ||| ||||||| Sbjct 211892 CTCTTGG-CAACAAGAAGTACTACAACGCCACAAACCCCTTCGACTTCATGGACAACATC 211834 Query 52791 TCGCTTGAGGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837 ||||| | |||||||||||||| ||||||||||| ||||| || || Sbjct 211833 TCGCTCGCTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTA 211787 >seq812 Length=913560 Score = 116 bits (128), Expect = 4e-21 Identities = 158/217 (73%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 138400 CGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAG 138459 |||| ||| | || | | | || ||||| || |||||||||||| || ||||| | Sbjct 528537 CGCAGAACCAGGTGCAGGGTAGATTCCTTCTGGATGTTGTAGTCGGACAAGGTACGACCG 528596 Query 138460 TCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTG 138519 ||||| || || ||||| | | |||| || ||||| ||||| ||||| |||||||| ||| Sbjct 528597 TCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCAGGAGGGATACCTTCCTTG 528656 Query 138520 TCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCA 138577 || ||| | || | || | ||| || | |||||| | || || ||||| | || | Sbjct 528657 TC-TTGAATCTTGCTCTTCACGTTG-TCAATTGTGTCGCTGGATTCAACCTCCAATGTGA 528714 Query 138578 GCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || || ||||||| ||| || |||||||||||||| Sbjct 528715 TAGTCTTGCCAGTCAAAGTCTTAACAAAAATCTGCAT 528751 Score = 89.7 bits (98), Expect = 5e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| ||||||||||| ||| || || || || || | || ||||| | | Sbjct 528786 GACTCCTTCTGAATGTTGTAATCGGACAAGGTGCGGCCATCTTCCAACTGCTTACCAGCA 528845 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| |||||||| ||||| ||||| || |||||||| || ||| || || | Sbjct 528846 AAGATAAGACGCTGCTGGTCGGGAGGGATGCCTTCTTTATCTTGGATCTTGCTCTTGACG 528905 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | ||| || | ||| || || || | || | || || || |||||||| || Sbjct 528906 TTATCGATGGTATCTGACGATTCGACTTCCAGAGTAATAGTCTTGCCGGTCAGAGTCTTG 528965 Query 138601 ACAAAAATCTGCAT 138614 || ||||||||||| Sbjct 528966 ACGAAAATCTGCAT 528979 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| | || || ||||| || || || || | Sbjct 529014 GACTCCTTCTGGATGTTGTAGTCGGAGAGTGTGCGGCCATCCTCAAGCTGCTTTCCAGCG 529073 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| ||||| || ||||| ||||| ||||| || || || ||| || || | Sbjct 529074 AAGATCAGACGTTGCTGGTCGGGAGGGATACCCTCCTTATCCTGGATCTTGCTCTTGACG 529133 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||||| ||||| ||||||| || | || || ||||| || || || Sbjct 529134 TTGTCGATGGTGTCGGAAGACTCAACCTCGAGGGTGATAGTCTTTCCAGTAAGGGTCTTC 529193 Query 138601 ACAAAAATCTGCAT 138614 || || |||||||| Sbjct 529194 ACGAAGATCTGCAT 529207 >seq609 Length=32548 Score = 107 bits (118), Expect = 2e-18 Identities = 126/168 (75%), Gaps = 2/168 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| | ||| || || | | | || ||||||||||||||||| || ||| Sbjct 21019 CCACCACGAAGACGGAGAACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCACTC 20960 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| ||| |||||||||||||||| | || ||||| ||||| || ||||| Sbjct 20959 AAGGTACGACCGTCTTCGAGTTGTTTACCGGCGAAAATGAGACGTTGTTGATCAGGAGGG 20900 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTC 138554 |||||||| || || ||| ||||| || | |||| || | |||||| Sbjct 20899 ATACCTTCCTTATCTTGGATCTTTTGCTTGACATTG-TCAATGGTGTC 20853 >seq810 Length=1034423 Score = 93.3 bits (102), Expect = 4e-14 Identities = 129/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484 |||| || |||||||||||||||| ||| || || ||||| || || |||| ||| Sbjct 583011 CCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCTTCGAGCTGCTTTCCGGCGAAGA 582952 Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTT 138544 | |||||||| |||||||| || || || || ||||| ||| || || | | | Sbjct 582951 TCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGT 582892 Query 138545 CCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAA 138604 | | ||||||| |||||| || |||| || | || ||||| ||||| || || || | Sbjct 582891 CGATCGTGTCGGACGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 582832 Query 138605 A 138605 | Sbjct 582831 A 582831 >seq744 Length=38458 Score = 82.4 bits (90), Expect = 8e-11 Identities = 144/207 (70%), Gaps = 6/207 (3%) Strand=Plus/Minus Query 52626 ATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAG 52685 || ||| |||| ||||| |||| || || || || | || | |||||||| | Sbjct 30759 ATTGAACAGGAATTTTTGACGGATGCTCTTCCCGTTGCTCTCATCGGCATGAATTCTGCT 30700 Query 52686 TCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCA---G 52742 | |||||| | |||||||| || || || |||||||| |||| |||| | | | Sbjct 30699 TTGATGTGCCAATACATCGAATTCGTTGCTGATCGTCTCATGGTT--GCTCTTGGATTTG 30642 Query 52743 CCAAAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGC 52802 ||| | | || ||| |||||| ||||| |||||| ||| || || ||| | ||| Sbjct 30641 ACAAGATT-TACATGGCTACCAATCCATTTGACTTTATGGACATGATCTCTCTTCAAGGC 30583 Query 52803 AAGACCAACTTTTTCGAGAAGCGAGTC 52829 ||||||||||| || || ||||| ||| Sbjct 30582 AAGACCAACTTCTTTGAAAAGCGTGTC 30556 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496257170634960