Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017
-02-15] 843 sequences; 47,573,060 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq657 141 9e-29
seq812 116 4e-21
seq609 107 2e-18
seq810 93.3 4e-14
seq744 82.4 8e-11
>seq657
Length=446211
Score = 141 bits (156), Expect = 9e-29
Identities = 352/527 (67%), Gaps = 33/527 (6%)
Strand=Plus/Minus
Query 52326 GTGCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGACACCG-- 52383
|| || ||| | ||||| ||||| | ||||| || |||||| || |||| |
Sbjct 212295 GTTCCCTGCATCCGCAAGAAGGCCGACTGGGCCATTCGCTGGATCCAG---GACAAGGAG 212239
Query 52384 -CCACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGC 52442
|||| | ||| ||||| |||| |||||||| || ||||| | || || || |||
Sbjct 212238 TCCACTTTCGCCCAGCGCTTGGTTGCCTTCGCTGCTGTTGAGGGTATCTTCTTCTCTGGC 212179
Query 52443 AGCTTTGCCGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGC 52502
|| ||| | ||||| | | || | | ||| | ||||| || ||||| |||
Sbjct 212178 TCTTTCGCCTCTATCTTCTGGCTGAAGAAGCGTGGCCTCATGCCTGGTCTGACCTTCTCT 212119
Query 52503 AACGAGTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCT------CTAC 52556
|||||| |||| || || || || || |||||||| ||||| || || || || |
Sbjct 212118 AACGAGCTGATCTCTCGTGATGAGGGTCTGCACACCGACTTCGCTTGTCTGCTGTTCTCC 212059
Query 52557 TACAAGA-----CGCGCGTGACCGAAAAATTGGATTCGGACACGATCCTGAGCATGTTCA 52611
|| || ||| | | ||| | ||| ||| | | |||| | |||
Sbjct 212058 CACCTGAACAACCGCCCCTCACCTGAGG-TTG---TCG-AGAAGATCATC-----GTT-- 212011
Query 52612 AGGAGGCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGG 52671
|| || || | || || ||||||| | |||| ||| || || || | || || |
Sbjct 212010 --GATGCCGTCGACATTGAGCAGGAGTTCCTGACGGACGCCCTCCCCGTTGCCCTCCTTG 211953
Query 52672 GCATGAACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGC 52731
| |||||| | || ||||||| ||||||||||||| || || || || ||| ||||
Sbjct 211952 GTATGAACTCCAAGCTCATGTGCCAGTACATCGAGTTCGTTGCCGACCGCCTGCTGGTCT 211893
Query 52732 AGCTCGGGCAGCCA-AAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATT 52790
|| || || | | ||||||| |||||| || || || || || ||| |||||||
Sbjct 211892 CTCTTGG-CAACAAGAAGTACTACAACGCCACAAACCCCTTCGACTTCATGGACAACATC 211834
Query 52791 TCGCTTGAGGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837
||||| | |||||||||||||| ||||||||||| ||||| || ||
Sbjct 211833 TCGCTCGCTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTA 211787
>seq812
Length=913560
Score = 116 bits (128), Expect = 4e-21
Identities = 158/217 (73%), Gaps = 4/217 (2%)
Strand=Plus/Plus
Query 138400 CGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAG 138459
|||| ||| | || | | | || ||||| || |||||||||||| || ||||| |
Sbjct 528537 CGCAGAACCAGGTGCAGGGTAGATTCCTTCTGGATGTTGTAGTCGGACAAGGTACGACCG 528596
Query 138460 TCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTG 138519
||||| || || ||||| | | |||| || ||||| ||||| ||||| |||||||| |||
Sbjct 528597 TCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCAGGAGGGATACCTTCCTTG 528656
Query 138520 TCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCA 138577
|| ||| | || | || | ||| || | |||||| | || || ||||| | || |
Sbjct 528657 TC-TTGAATCTTGCTCTTCACGTTG-TCAATTGTGTCGCTGGATTCAACCTCCAATGTGA 528714
Query 138578 GCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| || ||||||| ||| || ||||||||||||||
Sbjct 528715 TAGTCTTGCCAGTCAAAGTCTTAACAAAAATCTGCAT 528751
Score = 89.7 bits (98), Expect = 5e-13
Identities = 136/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||| ||||||||||| ||| || || || || || | || ||||| | |
Sbjct 528786 GACTCCTTCTGAATGTTGTAATCGGACAAGGTGCGGCCATCTTCCAACTGCTTACCAGCA 528845
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540
|||| |||||||| ||||| ||||| || |||||||| || ||| || || |
Sbjct 528846 AAGATAAGACGCTGCTGGTCGGGAGGGATGCCTTCTTTATCTTGGATCTTGCTCTTGACG 528905
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600
| || | ||| || | ||| || || || | || | || || || |||||||| ||
Sbjct 528906 TTATCGATGGTATCTGACGATTCGACTTCCAGAGTAATAGTCTTGCCGGTCAGAGTCTTG 528965
Query 138601 ACAAAAATCTGCAT 138614
|| |||||||||||
Sbjct 528966 ACGAAAATCTGCAT 528979
Score = 84.2 bits (92), Expect = 2e-11
Identities = 135/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||| || |||||||||||| | || || ||||| || || || || |
Sbjct 529014 GACTCCTTCTGGATGTTGTAGTCGGAGAGTGTGCGGCCATCCTCAAGCTGCTTTCCAGCG 529073
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540
|||| ||||| || ||||| ||||| ||||| || || || ||| || || |
Sbjct 529074 AAGATCAGACGTTGCTGGTCGGGAGGGATACCCTCCTTATCCTGGATCTTGCTCTTGACG 529133
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600
| || | |||||||| ||||| ||||||| || | || || ||||| || || ||
Sbjct 529134 TTGTCGATGGTGTCGGAAGACTCAACCTCGAGGGTGATAGTCTTTCCAGTAAGGGTCTTC 529193
Query 138601 ACAAAAATCTGCAT 138614
|| || ||||||||
Sbjct 529194 ACGAAGATCTGCAT 529207
>seq609
Length=32548
Score = 107 bits (118), Expect = 2e-18
Identities = 126/168 (75%), Gaps = 2/168 (1%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || || | ||| | ||| || || | | | || ||||||||||||||||| || |||
Sbjct 21019 CCACCACGAAGACGGAGAACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCACTC 20960
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||||| ||| |||||||||||||||| | || ||||| ||||| || |||||
Sbjct 20959 AAGGTACGACCGTCTTCGAGTTGTTTACCGGCGAAAATGAGACGTTGTTGATCAGGAGGG 20900
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTC 138554
|||||||| || || ||| ||||| || | |||| || | ||||||
Sbjct 20899 ATACCTTCCTTATCTTGGATCTTTTGCTTGACATTG-TCAATGGTGTC 20853
>seq810
Length=1034423
Score = 93.3 bits (102), Expect = 4e-14
Identities = 129/181 (71%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484
|||| || |||||||||||||||| ||| || || ||||| || || |||| |||
Sbjct 583011 CCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCTTCGAGCTGCTTTCCGGCGAAGA 582952
Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTT 138544
| |||||||| |||||||| || || || || ||||| ||| || || | | |
Sbjct 582951 TCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGT 582892
Query 138545 CCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAA 138604
| | ||||||| |||||| || |||| || | || ||||| ||||| || || || |
Sbjct 582891 CGATCGTGTCGGACGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 582832
Query 138605 A 138605
|
Sbjct 582831 A 582831
>seq744
Length=38458
Score = 82.4 bits (90), Expect = 8e-11
Identities = 144/207 (70%), Gaps = 6/207 (3%)
Strand=Plus/Minus
Query 52626 ATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAG 52685
|| ||| |||| ||||| |||| || || || || | || | |||||||| |
Sbjct 30759 ATTGAACAGGAATTTTTGACGGATGCTCTTCCCGTTGCTCTCATCGGCATGAATTCTGCT 30700
Query 52686 TCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCA---G 52742
| |||||| | |||||||| || || || |||||||| |||| |||| | | |
Sbjct 30699 TTGATGTGCCAATACATCGAATTCGTTGCTGATCGTCTCATGGTT--GCTCTTGGATTTG 30642
Query 52743 CCAAAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGC 52802
||| | | || ||| |||||| ||||| |||||| ||| || || ||| | |||
Sbjct 30641 ACAAGATT-TACATGGCTACCAATCCATTTGACTTTATGGACATGATCTCTCTTCAAGGC 30583
Query 52803 AAGACCAACTTTTTCGAGAAGCGAGTC 52829
||||||||||| || || ||||| |||
Sbjct 30582 AAGACCAACTTCTTTGAAAAGCGTGTC 30556
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496257170634960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |