Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017
-02-15] 843 sequences; 47,573,060 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq812 113 4e-20
seq657 109 5e-19
seq810 102 8e-17
>seq812
Length=913560
Score = 113 bits (124), Expect = 4e-20
Identities = 143/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|||||||| || ||||| ||||||||| || ||||| ||| || | ||| || |||
Sbjct 528783 GTAGACTCCTTCTGAATGTTGTAATCGGACAAGGTGCGGCCATCTTCCAACTGCTTACCA 528842
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
|| |||| | |||||||| |||||||| ||||| || || || ||| || ||||
Sbjct 528843 GCAAAGATAAGACGCTGCTGGTCGGGAGGGATGCCTTCTTTATCTTGGATCTTGCTCTTG 528902
Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096
| | |||| ||| || | |||||||| | || | || ||||||||||||||
Sbjct 528903 ACGTTATCGATGGTATCTGACGATTCGACTTCCAGAGTAATAGTCTTGCCGGTCAGAGTC 528962
Query 127097 TTTACAAAAATCTGCAT 127113
|| || |||||||||||
Sbjct 528963 TTGACGAAAATCTGCAT 528979
Score = 100 bits (110), Expect = 3e-16
Identities = 127/172 (74%), Gaps = 2/172 (1%)
Strand=Plus/Plus
Query 126904 CACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963
||||| || | || ||||| || || || ||||| || | ||||||| || ||
Sbjct 529226 CACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGCGTGCGACCGTCCTC 529285
Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023
||||| ||||||||| |||| | |||||||| || ||||| || ||||||||||||
Sbjct 529286 AAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTG 529345
Query 127024 GATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGT 127074
||| || ||||| |||| |||| |||||||| |||||| |||| |||
Sbjct 529346 GATCTTGCTCTTGACGTTG-TCGATGGTGTCCGAGGACTCGACCTCGAGGGT 529396
Score = 91.5 bits (100), Expect = 1e-13
Identities = 159/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945
|||||| || | ||||| |||| || | ||||| || || || || ||||| |||
Sbjct 528524 TCCACCACGGAGTCGCAGAACCAGGTGCAGGGTAGATTCCTTCTGGATGTTGTAGTCGGA 528583
Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005
|| || ||| || || ||||| || ||||| |||||| |||||||| || |||||
Sbjct 528584 CAAGGTACGACCGTCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCAGGAGG 528643
Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGA 127064
|| || |||||||| || || ||| | ||||| | | ||||| | || |
Sbjct 528644 GATACCTTCCTTGTCTTGAATCTTGCTCTTCACGTTGT-CAATTGTGTCGCTGGATTCAA 528702
Query 127065 CTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
| || | || | || ||||| |||| ||| || ||||||||||||||
Sbjct 528703 CCTCCAATGTGATAGTCTTGCCAGTCAAAGTCTTAACAAAAATCTGCAT 528751
>seq657
Length=446211
Score = 109 bits (120), Expect = 5e-19
Identities = 162/227 (71%), Gaps = 6/227 (3%)
Strand=Plus/Minus
Query 47355 GAAGCCGTCGCCATTGAGATGGAGTTTTTCGCCGAGGCTCTGCCCGAATCTTTAGTGGGA 47414
|| ||||||| ||||||| |||||| | | || || || |||| | | | ||
Sbjct 212010 GATGCCGTCGACATTGAGCAGGAGTTCCTGACGGACGCCCTCCCCGTTGCCCTCCTTGGT 211951
Query 47415 ATGAACGCGGAGATGATGAGAAAGTACATCGAATTTGTCGCCGACCGCCTGCTCGTTCAG 47474
|||||| | || | ||| | |||||||||| || || |||||||||||||| ||
Sbjct 211950 ATGAACTCCAAGCTCATGTGCCAGTACATCGAGTTCGTTGCCGACCGCCTGCTGGTCTCT 211891
Query 47475 CTAAAGTATCCCAAGATTTACCACA---CCGAGAATCCATTCGAGTTTATGAACAACATT 47531
|| | | ||||| ||| ||| || || || ||||| || ||| |||||||
Sbjct 211890 CT-TGGCA--ACAAGAAGTACTACAACGCCACAAACCCCTTCGACTTCATGGACAACATC 211834
Query 47532 TCGCTCGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGGCGAATA 47578
||||||| |||||||||||||| ||||||||||| ||||| || ||
Sbjct 211833 TCGCTCGCTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTA 211787
>seq810
Length=1034423
Score = 102 bits (112), Expect = 8e-17
Identities = 132/180 (73%), Gaps = 2/180 (1%)
Strand=Plus/Minus
Query 126926 TTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATC 126985
|| || || ||||| |||| || ||||| ||| || ||||| ||||| ||| |||||
Sbjct 583009 TTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCTTCGAGCTGCTTTCCGGCGAAGATC 582950
Query 126986 AATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTC 127044
| |||||||| || || || ||||||||||||||| ||| || ||||| |||| ||
Sbjct 582949 AGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTG-TC 582891
Query 127045 GACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 127104
|| ||||| | |||||| |||| ||| | || || || ||||| || || || ||
Sbjct 582890 GATCGTGTCGGACGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 582831
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475495789410320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |