Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017
-02-15] 843 sequences; 47,573,060 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq812 105 6e-18
>seq812
Length=913560
Score = 105 bits (116), Expect = 6e-18
Identities = 151/210 (72%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191
|| || || || || || ||||| || || || |||||| | ||| ||| |||
Sbjct 528771 ACAAGGTGGAGAGTAGACTCCTTCTGAATGTTGTAATCGGACAAGGTGCGGCCATCTTCC 528830
Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251
|| || || || || | || | || |||||||| || || |||||||||||||||||
Sbjct 528831 AACTGCTTACCAGCAAAGATAAGACGCTGCTGGTCGGGAGGGATGCCTTCTTTATCTTGG 528890
Query 45252 ATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTT 45310
|| || |||| || | || | ||| || || || |||||||| ||||||| || ||
Sbjct 528891 ATCTTGCTCTTGA-CGTTATCGATGGTATCTGACGATTCGACTTCCAGAGTAATAGTCTT 528949
Query 45311 GCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|||||| ||||| || || ||||| |||||
Sbjct 528950 GCCGGTCAGAGTCTTGACGAAAATCTGCAT 528979
Score = 95.1 bits (104), Expect = 1e-14
Identities = 161/231 (70%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| ||||| ||||| | || || || || || || || ||||| ||||| || || |||
Sbjct 528978 ATACCTCCACGGAGGCGCAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCG 529037
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
|| || ||| || | || ||||| ||| | |||| ||||||||||| ||
Sbjct 529038 GAGAGTGTGCGGCCATCCTCAAGCTGCTTTCCAGCGAAGATCAGACGTTGCTGGTCGGGA 529097
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
|| || || || ||||| || || || |||| || | || | |||||||||||||||
Sbjct 529098 GGGATACCCTCCTTATCCTGGATCTTGCTCTTGA-CGTTGTCGATGGTGTCGGAAGACTC 529156
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| ||||| || | || || || || || || || || || || |||||
Sbjct 529157 AACCTCGAGGGTGATAGTCTTTCCAGTAAGGGTCTTCACGAAGATCTGCAT 529207
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 451998437016280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |