Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017 -02-15] 843 sequences; 47,573,060 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq657 145 9e-30 seq578 114 2e-20 seq347 102 1e-16 seq268 102 1e-16 seq744 96.9 4e-15 >seq657 Length=446211 Score = 145 bits (160), Expect = 9e-30 Identities = 308/455 (68%), Gaps = 16/455 (4%) Strand=Plus/Plus Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290 |||||| ||||| ||||||||||||||||| ||||| ||| |||| ||| || ||||| Sbjct 211786 GTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCGAGCGAGATGTTGTCCAT 211845 Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCA--AATTGTTGGCACCCCAATCTGTTTGAGGAGA 127348 || || || ||||| | | ||| | | || ||| || || || || Sbjct 211846 GAAGTCGAAGGGGTTTGTGGCGTTGTAGTACTTCTTGTTGCC--AAGAGAGACCAGCAGG 211903 Query 127349 CGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTA 127408 || || | ||| |||| ||||||| |||| || ||||||||||| | |||| | Sbjct 211904 CGGTCGGCAACGAACTCGATGTACTGGCACATGAGCTTGGAGTTCATACCAAGGAGGGCA 211963 Query 127409 CATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATGGCG 127468 ||||| |||||| | |||| ||| ||||||||| || || || |||||| Sbjct 211964 ACGGGGAGGGCGTCCGTCAGGAACTCCTGCTCAATGTCGACGGCATCA---ACGATGATC 212020 Query 127469 TGAATAGTGTCCACCCCAGGTCTATTGCGTAAAGTC---TTGAAGAGTTCCACA---GCA 127522 | | | | ||| ||||| ||| || | | ||| || | || Sbjct 212021 T---TCTCGACAACCTCAGGTGAGGGGCGGTTGTTCAGGTGGGAGAACAGCAGACAAGCG 212077 Query 127523 AACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGC 127582 || || ||| |||||||| ||||| ||||| || || || |||||| |||||| ||| Sbjct 212078 AAGTCGGTGTGCAGACCCTCATCACGAGAGATCAGCTCGTTAGAGAAGGTCAGACCAGGC 212137 Query 127583 ATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCC 127642 ||||| || |||||||||| |||||| || | || ||||||||||||||||| ||| Sbjct 212138 ATGAGGCCACGCTTCTTCAGCCAGAAGATAGAGGCGAAAGAGCCAGAGAAGAAGATACCC 212197 Query 127643 TCCACACACGCGAACGCAAATAGACGCTCGGCAAA 127677 || ||| ||||| |||| | |||| ||| || Sbjct 212198 TCAACAGCAGCGAAGGCAACCAAGCGCTGGGCGAA 212232 >seq578 Length=440600 Score = 114 bits (126), Expect = 2e-20 Identities = 403/617 (65%), Gaps = 12/617 (2%) Strand=Plus/Minus Query 116663 TTGTG-TAGAGGGCCTCAAACTCTTCACCCACAGCC-TCTGAGAGCCCTGGTGCCTTATC 116720 ||||| || || ||||||||||| || || | || | || || || || || |||| || Sbjct 116016 TTGTGGTACAGAGCCTCAAACTCATCGCC-ATAGACATCAGAAAGACCGGGAGCCTCATT 115958 Query 116721 TGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGAT 116780 ||| ||||| || | ||| | ||| |||||| |||||||||||||| || || | Sbjct 115957 TGGGCAGAATAGGGTCCAGTCACCGTTAGACTCAACACGCTTCATGAAGAGATCGGGAGT 115898 Query 116781 CCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAA 116840 |||||| || ||||||| || || | | ||||| | || || || || | Sbjct 115897 CCAGAGGGCATAGAAGAGGTCACGTGCTCTGACCTCTTCCTTACCGTGGTTCTTGCGAAG 115838 Query 116841 CTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTT 116900 ||||| || || | ||| || | |||||| || |||||||| | |||| | || Sbjct 115837 GTCCAAGAACTCAAAGATGTCGGAGTGCCAGGGCTCCAGGTAGATAGCGAAAGCACCAGG 115778 Query 116901 GCG---ACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGG 116957 ||| || |||||| || || || || || ||| || || |||||||| || Sbjct 115777 GCGCTTGTTCCCGCCCTGGTCAACGTATCTTGCAGTGTTGTTGAACACTCGAAGCATAGG 115718 Query 116958 AATGATACCATCAGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTGTTGGCTCTGACA 117015 | | || | || || || || || |||| || || || || | || | || | Sbjct 115717 GACAAGCCCGTTGGAAGTTCCGTTAGTACCACCGATGTAAGA-ACCTG-TAGCACGGATA 115660 Query 117016 TCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGA 117075 ||||| || | ||||||||| || || ||| ||||| || || | | | Sbjct 115659 CGGTGGACGTTGAGACCAATACCACCCGCAGTCTTGGAGATCATGGCACAAGTCTTCAAG 115600 Query 117076 CTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATT 117135 || | ||||| || || || ||| |||| | |||| ||||||||| | || Sbjct 115599 GTGTCATAGATACCCTCAATGCTGTCCTCCTTCATATCGATAAGGAAGCAGGAGGCCAGC 115540 Query 117136 TGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAA-CATACCTTG 117194 || ||| || ||||| |||||||| || || || | ||||| |||| || | || Sbjct 115539 TGCGGCTGAGGAGTACCGGCGTTGAACAGAGTCGGCGAGGCGTGAGTGAAGTATTTC-TG 115481 Query 117195 GGACATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGA 117254 ||||||| || ||||||||| | || | ||| || ||||| || |||| | Sbjct 115480 GGACATCAGATTGTAGGTCTCGATAACCTTCTCGAGGTCATCACCGTGGATTCCGACCGC 115421 Query 117255 GACCCGCATAAACATGT 117271 || ||||||| ||||| Sbjct 115420 AACACGCATAATCATGT 115404 >seq347 Length=15602 Score = 102 bits (112), Expect = 1e-16 Identities = 205/304 (67%), Gaps = 0/304 (0%) Strand=Plus/Minus Query 176619 AGTGGATCATATTGAGGATGAGACCCTTAATGTGTGAACCATCGTTATCCGCATCCGTCA 176678 ||| ||| | |||| ||| |||||||| || ||||||||||| | ||| ||| |||| Sbjct 5268 AGTCGATAAAGTTGATGATCAGACCCTTGATATGTGAACCATCATGATCTTGATCTGTCA 5209 Query 176679 TAATCATGAGCCGACCATAGCGAAGCTCGGAAACATCTTGATAATCCTTACCTTGTTGAA 176738 | ||||| | |||||||| || | ||| |||| || ||| | ||||| || |||| Sbjct 5208 TGATCATCAAACGACCATATCGTAACTCATCAACACTTTCATACTTTTTACCATGCTGAA 5149 Query 176739 GACCCAAAATCTTCTTGAGATCATTGAACTCTTGGTTTGATGTGAGTTGCGCCACTGAAG 176798 |||| | ||| ||||| | |||| |||| || |||||| || ||| Sbjct 5148 GACCAAGAATAGCCTTGATGTTTTTGATTTCTTCATTCTTCATGAGTTCAGCATTAGAAA 5089 Query 176799 CGTCGCGGACATTTTTACACTTCCCGCGGAGAGGGAACACACCGTAGTGATCACGACCAA 176858 | || || || || || || || | ||||| ||||| |||| |||||||||| Sbjct 5088 CATCACGAACGTTCAATAGTTTACCACGAATGGGGAAAACACCATAGTAGTCACGACCAA 5029 Query 176859 CCACAGAGAGACCAGCAACTGCGAGGGTCTTCGCGGAATCACCCTCCGTCACGATGAGCG 176918 | || || | |||| | | || | ||| || |||||||| || || | || || | Sbjct 5028 CTACTGACATACCACTCAAGACAAGCGACTTGGCTGAATCACCTTCTGTGATTATCAGAG 4969 Query 176919 TACA 176922 |||| Sbjct 4968 TACA 4965 >seq268 Length=14648 Score = 102 bits (112), Expect = 1e-16 Identities = 205/304 (67%), Gaps = 0/304 (0%) Strand=Plus/Minus Query 176619 AGTGGATCATATTGAGGATGAGACCCTTAATGTGTGAACCATCGTTATCCGCATCCGTCA 176678 ||| ||| | |||| ||| |||||||| || ||||||||||| | ||| ||| |||| Sbjct 5310 AGTCGATAAAGTTGATGATCAGACCCTTGATATGTGAACCATCATGATCTTGATCTGTCA 5251 Query 176679 TAATCATGAGCCGACCATAGCGAAGCTCGGAAACATCTTGATAATCCTTACCTTGTTGAA 176738 | ||||| | |||||||| || | ||| |||| || ||| | ||||| || |||| Sbjct 5250 TGATCATCAAACGACCATATCGTAACTCATCAACACTTTCATACTTTTTACCATGCTGAA 5191 Query 176739 GACCCAAAATCTTCTTGAGATCATTGAACTCTTGGTTTGATGTGAGTTGCGCCACTGAAG 176798 |||| | ||| ||||| | |||| |||| || |||||| || ||| Sbjct 5190 GACCAAGAATAGCCTTGATGTTTTTGATTTCTTCATTCTTCATGAGTTCAGCATTAGAAA 5131 Query 176799 CGTCGCGGACATTTTTACACTTCCCGCGGAGAGGGAACACACCGTAGTGATCACGACCAA 176858 | || || || || || || || | ||||| ||||| |||| |||||||||| Sbjct 5130 CATCACGAACGTTCAATAGTTTACCACGAATGGGGAAAACACCATAGTAGTCACGACCAA 5071 Query 176859 CCACAGAGAGACCAGCAACTGCGAGGGTCTTCGCGGAATCACCCTCCGTCACGATGAGCG 176918 | || || | |||| | | || | ||| || |||||||| || || | || || | Sbjct 5070 CTACTGACATACCACTCAAGACAAGCGACTTGGCTGAATCACCTTCTGTGATTATCAGAG 5011 Query 176919 TACA 176922 |||| Sbjct 5010 TACA 5007 >seq744 Length=38458 Score = 96.9 bits (106), Expect = 4e-15 Identities = 188/275 (68%), Gaps = 7/275 (3%) Strand=Plus/Plus Query 127519 AGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 127578 |||||| || || || || || ||||| |||| | |||||| ||| || ||| Sbjct 30835 AGCAAAGTCAGTATGAAGGCCTTCATCACGACAGATCAATTCATTGCTGAATGTCAAACC 30894 Query 127579 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 127638 ||||| | ||| || ||||| | ||| ||||| | | ||| || ||||||||||| || Sbjct 30895 AGGCATCAAACCACGTTTCTTGAGCCAAAAAATGGAAGCAAAGGAACCAGAGAAGAAAAT 30954 Query 127639 CCCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATCAAA 127698 || || ||| || || |||| |||||||| ||||| || | | || | || Sbjct 30955 ACCTTCGACAGCAGCAAAGGCAACAAGACGCTCAGCAAAAGAACCG---TTAGAGGAAAT 31011 Query 127699 CCACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAA 127758 |||||| | ||||| | |||||| | | |||||| |||| || | || || ||| Sbjct 31012 CCACTTGAAGGCCCAATCAGCCTTTCTTTTGATACAAGGGATAGTGTCAATAGCAGAAAA 31071 Query 127759 GAGTTCCTTCTTTTCTGATGG--ATCTTTGATGTA 127791 ||| | || ||||| ||| ||||||||| || Sbjct 31072 GAG--CATTTCTTTCTCTTGGTTATCTTTGATATA 31104 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613500735167880