Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017
-02-15] 843 sequences; 47,573,060 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq657 145 9e-30
seq578 114 2e-20
seq347 102 1e-16
seq268 102 1e-16
seq744 96.9 4e-15
>seq657
Length=446211
Score = 145 bits (160), Expect = 9e-30
Identities = 308/455 (68%), Gaps = 16/455 (4%)
Strand=Plus/Plus
Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290
|||||| ||||| ||||||||||||||||| ||||| ||| |||| ||| || |||||
Sbjct 211786 GTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCGAGCGAGATGTTGTCCAT 211845
Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCA--AATTGTTGGCACCCCAATCTGTTTGAGGAGA 127348
|| || || ||||| | | ||| | | || ||| || || || ||
Sbjct 211846 GAAGTCGAAGGGGTTTGTGGCGTTGTAGTACTTCTTGTTGCC--AAGAGAGACCAGCAGG 211903
Query 127349 CGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTA 127408
|| || | ||| |||| ||||||| |||| || ||||||||||| | |||| |
Sbjct 211904 CGGTCGGCAACGAACTCGATGTACTGGCACATGAGCTTGGAGTTCATACCAAGGAGGGCA 211963
Query 127409 CATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATGGCG 127468
||||| |||||| | |||| ||| ||||||||| || || || ||||||
Sbjct 211964 ACGGGGAGGGCGTCCGTCAGGAACTCCTGCTCAATGTCGACGGCATCA---ACGATGATC 212020
Query 127469 TGAATAGTGTCCACCCCAGGTCTATTGCGTAAAGTC---TTGAAGAGTTCCACA---GCA 127522
| | | | ||| ||||| ||| || | | ||| || | ||
Sbjct 212021 T---TCTCGACAACCTCAGGTGAGGGGCGGTTGTTCAGGTGGGAGAACAGCAGACAAGCG 212077
Query 127523 AACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGC 127582
|| || ||| |||||||| ||||| ||||| || || || |||||| |||||| |||
Sbjct 212078 AAGTCGGTGTGCAGACCCTCATCACGAGAGATCAGCTCGTTAGAGAAGGTCAGACCAGGC 212137
Query 127583 ATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCC 127642
||||| || |||||||||| |||||| || | || ||||||||||||||||| |||
Sbjct 212138 ATGAGGCCACGCTTCTTCAGCCAGAAGATAGAGGCGAAAGAGCCAGAGAAGAAGATACCC 212197
Query 127643 TCCACACACGCGAACGCAAATAGACGCTCGGCAAA 127677
|| ||| ||||| |||| | |||| ||| ||
Sbjct 212198 TCAACAGCAGCGAAGGCAACCAAGCGCTGGGCGAA 212232
>seq578
Length=440600
Score = 114 bits (126), Expect = 2e-20
Identities = 403/617 (65%), Gaps = 12/617 (2%)
Strand=Plus/Minus
Query 116663 TTGTG-TAGAGGGCCTCAAACTCTTCACCCACAGCC-TCTGAGAGCCCTGGTGCCTTATC 116720
||||| || || ||||||||||| || || | || | || || || || || |||| ||
Sbjct 116016 TTGTGGTACAGAGCCTCAAACTCATCGCC-ATAGACATCAGAAAGACCGGGAGCCTCATT 115958
Query 116721 TGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGAT 116780
||| ||||| || | ||| | ||| |||||| |||||||||||||| || || |
Sbjct 115957 TGGGCAGAATAGGGTCCAGTCACCGTTAGACTCAACACGCTTCATGAAGAGATCGGGAGT 115898
Query 116781 CCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAA 116840
|||||| || ||||||| || || | | ||||| | || || || || |
Sbjct 115897 CCAGAGGGCATAGAAGAGGTCACGTGCTCTGACCTCTTCCTTACCGTGGTTCTTGCGAAG 115838
Query 116841 CTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTT 116900
||||| || || | ||| || | |||||| || |||||||| | |||| | ||
Sbjct 115837 GTCCAAGAACTCAAAGATGTCGGAGTGCCAGGGCTCCAGGTAGATAGCGAAAGCACCAGG 115778
Query 116901 GCG---ACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGG 116957
||| || |||||| || || || || || ||| || || |||||||| ||
Sbjct 115777 GCGCTTGTTCCCGCCCTGGTCAACGTATCTTGCAGTGTTGTTGAACACTCGAAGCATAGG 115718
Query 116958 AATGATACCATCAGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTGTTGGCTCTGACA 117015
| | || | || || || || || |||| || || || || | || | || |
Sbjct 115717 GACAAGCCCGTTGGAAGTTCCGTTAGTACCACCGATGTAAGA-ACCTG-TAGCACGGATA 115660
Query 117016 TCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGA 117075
||||| || | ||||||||| || || ||| ||||| || || | | |
Sbjct 115659 CGGTGGACGTTGAGACCAATACCACCCGCAGTCTTGGAGATCATGGCACAAGTCTTCAAG 115600
Query 117076 CTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATT 117135
|| | ||||| || || || ||| |||| | |||| ||||||||| | ||
Sbjct 115599 GTGTCATAGATACCCTCAATGCTGTCCTCCTTCATATCGATAAGGAAGCAGGAGGCCAGC 115540
Query 117136 TGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAA-CATACCTTG 117194
|| ||| || ||||| |||||||| || || || | ||||| |||| || | ||
Sbjct 115539 TGCGGCTGAGGAGTACCGGCGTTGAACAGAGTCGGCGAGGCGTGAGTGAAGTATTTC-TG 115481
Query 117195 GGACATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGA 117254
||||||| || ||||||||| | || | ||| || ||||| || |||| |
Sbjct 115480 GGACATCAGATTGTAGGTCTCGATAACCTTCTCGAGGTCATCACCGTGGATTCCGACCGC 115421
Query 117255 GACCCGCATAAACATGT 117271
|| ||||||| |||||
Sbjct 115420 AACACGCATAATCATGT 115404
>seq347
Length=15602
Score = 102 bits (112), Expect = 1e-16
Identities = 205/304 (67%), Gaps = 0/304 (0%)
Strand=Plus/Minus
Query 176619 AGTGGATCATATTGAGGATGAGACCCTTAATGTGTGAACCATCGTTATCCGCATCCGTCA 176678
||| ||| | |||| ||| |||||||| || ||||||||||| | ||| ||| ||||
Sbjct 5268 AGTCGATAAAGTTGATGATCAGACCCTTGATATGTGAACCATCATGATCTTGATCTGTCA 5209
Query 176679 TAATCATGAGCCGACCATAGCGAAGCTCGGAAACATCTTGATAATCCTTACCTTGTTGAA 176738
| ||||| | |||||||| || | ||| |||| || ||| | ||||| || ||||
Sbjct 5208 TGATCATCAAACGACCATATCGTAACTCATCAACACTTTCATACTTTTTACCATGCTGAA 5149
Query 176739 GACCCAAAATCTTCTTGAGATCATTGAACTCTTGGTTTGATGTGAGTTGCGCCACTGAAG 176798
|||| | ||| ||||| | |||| |||| || |||||| || |||
Sbjct 5148 GACCAAGAATAGCCTTGATGTTTTTGATTTCTTCATTCTTCATGAGTTCAGCATTAGAAA 5089
Query 176799 CGTCGCGGACATTTTTACACTTCCCGCGGAGAGGGAACACACCGTAGTGATCACGACCAA 176858
| || || || || || || || | ||||| ||||| |||| ||||||||||
Sbjct 5088 CATCACGAACGTTCAATAGTTTACCACGAATGGGGAAAACACCATAGTAGTCACGACCAA 5029
Query 176859 CCACAGAGAGACCAGCAACTGCGAGGGTCTTCGCGGAATCACCCTCCGTCACGATGAGCG 176918
| || || | |||| | | || | ||| || |||||||| || || | || || |
Sbjct 5028 CTACTGACATACCACTCAAGACAAGCGACTTGGCTGAATCACCTTCTGTGATTATCAGAG 4969
Query 176919 TACA 176922
||||
Sbjct 4968 TACA 4965
>seq268
Length=14648
Score = 102 bits (112), Expect = 1e-16
Identities = 205/304 (67%), Gaps = 0/304 (0%)
Strand=Plus/Minus
Query 176619 AGTGGATCATATTGAGGATGAGACCCTTAATGTGTGAACCATCGTTATCCGCATCCGTCA 176678
||| ||| | |||| ||| |||||||| || ||||||||||| | ||| ||| ||||
Sbjct 5310 AGTCGATAAAGTTGATGATCAGACCCTTGATATGTGAACCATCATGATCTTGATCTGTCA 5251
Query 176679 TAATCATGAGCCGACCATAGCGAAGCTCGGAAACATCTTGATAATCCTTACCTTGTTGAA 176738
| ||||| | |||||||| || | ||| |||| || ||| | ||||| || ||||
Sbjct 5250 TGATCATCAAACGACCATATCGTAACTCATCAACACTTTCATACTTTTTACCATGCTGAA 5191
Query 176739 GACCCAAAATCTTCTTGAGATCATTGAACTCTTGGTTTGATGTGAGTTGCGCCACTGAAG 176798
|||| | ||| ||||| | |||| |||| || |||||| || |||
Sbjct 5190 GACCAAGAATAGCCTTGATGTTTTTGATTTCTTCATTCTTCATGAGTTCAGCATTAGAAA 5131
Query 176799 CGTCGCGGACATTTTTACACTTCCCGCGGAGAGGGAACACACCGTAGTGATCACGACCAA 176858
| || || || || || || || | ||||| ||||| |||| ||||||||||
Sbjct 5130 CATCACGAACGTTCAATAGTTTACCACGAATGGGGAAAACACCATAGTAGTCACGACCAA 5071
Query 176859 CCACAGAGAGACCAGCAACTGCGAGGGTCTTCGCGGAATCACCCTCCGTCACGATGAGCG 176918
| || || | |||| | | || | ||| || |||||||| || || | || || |
Sbjct 5070 CTACTGACATACCACTCAAGACAAGCGACTTGGCTGAATCACCTTCTGTGATTATCAGAG 5011
Query 176919 TACA 176922
||||
Sbjct 5010 TACA 5007
>seq744
Length=38458
Score = 96.9 bits (106), Expect = 4e-15
Identities = 188/275 (68%), Gaps = 7/275 (3%)
Strand=Plus/Plus
Query 127519 AGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 127578
|||||| || || || || || ||||| |||| | |||||| ||| || |||
Sbjct 30835 AGCAAAGTCAGTATGAAGGCCTTCATCACGACAGATCAATTCATTGCTGAATGTCAAACC 30894
Query 127579 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 127638
||||| | ||| || ||||| | ||| ||||| | | ||| || ||||||||||| ||
Sbjct 30895 AGGCATCAAACCACGTTTCTTGAGCCAAAAAATGGAAGCAAAGGAACCAGAGAAGAAAAT 30954
Query 127639 CCCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATCAAA 127698
|| || ||| || || |||| |||||||| ||||| || | | || | ||
Sbjct 30955 ACCTTCGACAGCAGCAAAGGCAACAAGACGCTCAGCAAAAGAACCG---TTAGAGGAAAT 31011
Query 127699 CCACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAA 127758
|||||| | ||||| | |||||| | | |||||| |||| || | || || |||
Sbjct 31012 CCACTTGAAGGCCCAATCAGCCTTTCTTTTGATACAAGGGATAGTGTCAATAGCAGAAAA 31071
Query 127759 GAGTTCCTTCTTTTCTGATGG--ATCTTTGATGTA 127791
||| | || ||||| ||| ||||||||| ||
Sbjct 31072 GAG--CATTTCTTTCTCTTGGTTATCTTTGATATA 31104
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613500735167880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |