Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017 -02-15] 843 sequences; 47,573,060 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq657 140 5e-28 seq578 116 6e-21 seq723 104 4e-17 >seq657 Length=446211 Score = 140 bits (154), Expect = 5e-28 Identities = 331/498 (66%), Gaps = 9/498 (2%) Strand=Plus/Plus Query 159649 CTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTT 159708 ||||||||| |||||||||||||| | | || || |||||||| |||| ||||| Sbjct 211801 CTTCTCGAAGAAGTTGGTCTTGCCAGCGAGCGAGATGTTGTCCATGAAGTCGAAGGGGTT 211860 Query 159709 CTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATTC 159768 | ||| ||| |||| || |||| |||||| | ||| || || || || Sbjct 211861 TGTGGCGTTGTAGTACTTCTTGTTGCCAAGAGAGACCAGCAGGCGGTCGGCAACGAACTC 211920 Query 159769 GATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTCCGA 159828 |||||| ||||| ||| |||| || || || || ||||||||| || |||| Sbjct 211921 GATGTACTGGCACATGAGCTTGGAGTTCATACCAAGGAGGGCAACGGGGAGGGCGTCCGT 211980 Query 159829 CAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGACACGTTC--GT-A 159885 ||| ||||||| |||||| ||||| || || | |||| | |||| || || | Sbjct 211981 CAGGAACTCCTGCTCAATGTCGACGGCATCAACGATGATCTTCTCGACAACCTCAGGTGA 212040 Query 159886 CCCCGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTCC 159945 | ||| || ||| ||||| || || || |||||| |||||| || Sbjct 212041 GGGGCGGTTGTTCA------GGTGGGAGAACAGCAGACAAGCGAAGTCGGTGTGCAGACC 212094 Query 159946 CTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTTT 160005 ||| || |||||||| | |||||| || | | | || || ||||||| |||||| || Sbjct 212095 CTCATCACGAGAGATCAGCTCGTTAGAGAAGGTCAGACCAGGCATGAGGCCACGCTTCTT 212154 Query 160006 GAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAACGC 160065 ||||| || || | || |||| || || ||||| ||||| || || || || || Sbjct 212155 CAGCCAGAAGATAGAGGCGAAAGAGCCAGAGAAGAAGATACCCTCAACAGCAGCGAAGGC 212214 Query 160066 CACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCATTCAGC 160125 || | | || | |||| || | |||| ||| |||| | ||||||| || || Sbjct 212215 AACCAAGCGCTGGGCGAAAGTGGACTCCTTGTCCTGGATCCAGCGAATGGCCCAGTCGGC 212274 Query 160126 CTTCTTTGCGATGCACGG 160143 |||||| |||||| || Sbjct 212275 CTTCTTGCGGATGCAGGG 212292 >seq578 Length=440600 Score = 116 bits (128), Expect = 6e-21 Identities = 382/582 (66%), Gaps = 10/582 (2%) Strand=Plus/Minus Query 203839 CTTGTCCACCGTGAACTGAATGGCGTTCACG-GCAGGCCTGCTTCTCAGATAGTACATGC 203897 || ||| || ||||||||||| | | || |||| | | | | || |||||||||| Sbjct 117218 CTGGTCGACGGTGAACTGAATAG-GAGCAGAAGCAGCCATAGTGCGAAGGTAGTACATGC 117160 Query 203898 CGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGG 203957 ||||||| || ||| ||| ||| || | |||||| | | |||| || | | Sbjct 117159 CGGTCTTCAGACCCATCTTCCATCCAGCGAAGTGCATACTGGTGATCTTGCCCATAGTAG 117100 Query 203958 GGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCG 204016 | || |||||| ||||| || ||||| ||||| ||| | | |||| || ||||| Sbjct 117099 GCTCCCTCATGTGGATGTTAAGGGACTGAGACTGGTCAATGTACG-CGCCACGGTCTGCA 117041 Query 204017 GCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGTG 204076 ||||| | | ||||| ||| || || |||||||| |||||| ||| | || || Sbjct 117040 GCCATCTGAAGGATGGTACGCTGAGAGATTTCCCACACAGTCTTGTACAGAGCCTTGATG 116981 Query 204077 TGTTGAGGCACATCTTCCCACGTCCTGATCG-AGCCGTTGTCGGCCATCAGTCTCATCCT 204135 | ||| | | | | || ||| || | || ||||| || | | || | Sbjct 116980 TCGGCAGGAATGT-TGGGGATGTTCTGGACGGAACCTCCCTCGGCAATGATACGGTTCTT 116922 Query 204136 CGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGAT 204195 | | | || ||||| ||| | || || ||| || ||| ||||| | || Sbjct 116921 CATGTTGTCAGACCACAAGCCGAGGTCGACGAGATCCTTCAGCAGCCAAGGGTTAACGAC 116862 Query 204196 CTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGC 204255 ||| || ||||| | || || | || | | | | ||| ||| |||||||||| Sbjct 116861 CTGGAACTCTCCCGCAAGGACACGACGAGAGTAGATGTTCGAAGTGTATGGTTCGAAGCA 116802 Query 204256 CTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGA 204315 |||||| ||| | |||||| ||| |||||||||||||||||||| | ||||| | Sbjct 116801 TTCGTTGAAGCCCAGGATCTGACTGGTACTGGCCGTGGGCATGGGAGCAACGAGCAAGCT 116742 Query 204316 GTTGCGCACACCGTATTTTTGG-ACCCTGCG-CTTCAGAGAGGTCCAGTCGTGCATCGCA 204373 |||||| ||||| || |||| | || || |||||| || ||||||| | || Sbjct 116741 GTTGCGGACACC--ATGCTTGGCAATCTCCGCCTTCAGTGAACTCCAGTCCCAAAGGTCA 116684 Query 204374 CTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGA 204415 | || || | ||||||||||| |||||| |||||| ||| Sbjct 116683 GTAGGGGTCTTGTCCCACATGTCGTACTGAAGGATGCCCTGA 116642 >seq723 Length=18298 Score = 104 bits (114), Expect = 4e-17 Identities = 140/195 (72%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 203867 ACGGCAGGCCTGCTTCTCAGATAGTACATGCCGGTCTTTAGGCCCTTCTGCCACCCGTAC 203926 || ||||| || ||||| |||||||||||| ||||||| ||||||| ||| | || Sbjct 4410 ACTGCAGGTCTAGATCTCAAATAGTACATGCCAGTCTTTAATCCCTTCTTCCAGGCATAA 4469 Query 203927 ATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGCCATGTGAATGTTCAGAGACTGG 203986 | |||||| || | || ||||| | ||| || ||||| | | |||| ||| || Sbjct 4470 AAGTGCATAGAGGTCAATTTGCCAAAGTTTGGTTCGGCAGTAAACAAATTCATAGATTGA 4529 Query 203987 CTTTGGTCGATGAAAGGCGCCCGATCTGCGGCCATATTGATAATGGTCTTCTGCGAAATC 204046 ||||||||| |||| | | ||| |||||||| | ||||| || | || |||||| Sbjct 4530 GATTGGTCGATAAAAGCTCCTCTATCAGCGGCCATGTCAATAATAGTTCTTTGTGAAATC 4589 Query 204047 TCCCACACCGTCTTG 204061 ||||| || || ||| Sbjct 4590 TCCCATACTGTTTTG 4604 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795146821052080