Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017
-02-15] 843 sequences; 47,573,060 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq657 140 5e-28
seq578 116 6e-21
seq723 104 4e-17
>seq657
Length=446211
Score = 140 bits (154), Expect = 5e-28
Identities = 331/498 (66%), Gaps = 9/498 (2%)
Strand=Plus/Plus
Query 159649 CTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTT 159708
||||||||| |||||||||||||| | | || || |||||||| |||| |||||
Sbjct 211801 CTTCTCGAAGAAGTTGGTCTTGCCAGCGAGCGAGATGTTGTCCATGAAGTCGAAGGGGTT 211860
Query 159709 CTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATTC 159768
| ||| ||| |||| || |||| |||||| | ||| || || || ||
Sbjct 211861 TGTGGCGTTGTAGTACTTCTTGTTGCCAAGAGAGACCAGCAGGCGGTCGGCAACGAACTC 211920
Query 159769 GATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTCCGA 159828
|||||| ||||| ||| |||| || || || || ||||||||| || ||||
Sbjct 211921 GATGTACTGGCACATGAGCTTGGAGTTCATACCAAGGAGGGCAACGGGGAGGGCGTCCGT 211980
Query 159829 CAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGACACGTTC--GT-A 159885
||| ||||||| |||||| ||||| || || | |||| | |||| || || |
Sbjct 211981 CAGGAACTCCTGCTCAATGTCGACGGCATCAACGATGATCTTCTCGACAACCTCAGGTGA 212040
Query 159886 CCCCGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTCC 159945
| ||| || ||| ||||| || || || |||||| |||||| ||
Sbjct 212041 GGGGCGGTTGTTCA------GGTGGGAGAACAGCAGACAAGCGAAGTCGGTGTGCAGACC 212094
Query 159946 CTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTTT 160005
||| || |||||||| | |||||| || | | | || || ||||||| |||||| ||
Sbjct 212095 CTCATCACGAGAGATCAGCTCGTTAGAGAAGGTCAGACCAGGCATGAGGCCACGCTTCTT 212154
Query 160006 GAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAACGC 160065
||||| || || | || |||| || || ||||| ||||| || || || || ||
Sbjct 212155 CAGCCAGAAGATAGAGGCGAAAGAGCCAGAGAAGAAGATACCCTCAACAGCAGCGAAGGC 212214
Query 160066 CACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCATTCAGC 160125
|| | | || | |||| || | |||| ||| |||| | ||||||| || ||
Sbjct 212215 AACCAAGCGCTGGGCGAAAGTGGACTCCTTGTCCTGGATCCAGCGAATGGCCCAGTCGGC 212274
Query 160126 CTTCTTTGCGATGCACGG 160143
|||||| |||||| ||
Sbjct 212275 CTTCTTGCGGATGCAGGG 212292
>seq578
Length=440600
Score = 116 bits (128), Expect = 6e-21
Identities = 382/582 (66%), Gaps = 10/582 (2%)
Strand=Plus/Minus
Query 203839 CTTGTCCACCGTGAACTGAATGGCGTTCACG-GCAGGCCTGCTTCTCAGATAGTACATGC 203897
|| ||| || ||||||||||| | | || |||| | | | | || ||||||||||
Sbjct 117218 CTGGTCGACGGTGAACTGAATAG-GAGCAGAAGCAGCCATAGTGCGAAGGTAGTACATGC 117160
Query 203898 CGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGG 203957
||||||| || ||| ||| ||| || | |||||| | | |||| || | |
Sbjct 117159 CGGTCTTCAGACCCATCTTCCATCCAGCGAAGTGCATACTGGTGATCTTGCCCATAGTAG 117100
Query 203958 GGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCG 204016
| || |||||| ||||| || ||||| ||||| ||| | | |||| || |||||
Sbjct 117099 GCTCCCTCATGTGGATGTTAAGGGACTGAGACTGGTCAATGTACG-CGCCACGGTCTGCA 117041
Query 204017 GCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGTG 204076
||||| | | ||||| ||| || || |||||||| |||||| ||| | || ||
Sbjct 117040 GCCATCTGAAGGATGGTACGCTGAGAGATTTCCCACACAGTCTTGTACAGAGCCTTGATG 116981
Query 204077 TGTTGAGGCACATCTTCCCACGTCCTGATCG-AGCCGTTGTCGGCCATCAGTCTCATCCT 204135
| ||| | | | | || ||| || | || ||||| || | | || |
Sbjct 116980 TCGGCAGGAATGT-TGGGGATGTTCTGGACGGAACCTCCCTCGGCAATGATACGGTTCTT 116922
Query 204136 CGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGAT 204195
| | | || ||||| ||| | || || ||| || ||| ||||| | ||
Sbjct 116921 CATGTTGTCAGACCACAAGCCGAGGTCGACGAGATCCTTCAGCAGCCAAGGGTTAACGAC 116862
Query 204196 CTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGC 204255
||| || ||||| | || || | || | | | | ||| ||| ||||||||||
Sbjct 116861 CTGGAACTCTCCCGCAAGGACACGACGAGAGTAGATGTTCGAAGTGTATGGTTCGAAGCA 116802
Query 204256 CTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGA 204315
|||||| ||| | |||||| ||| |||||||||||||||||||| | ||||| |
Sbjct 116801 TTCGTTGAAGCCCAGGATCTGACTGGTACTGGCCGTGGGCATGGGAGCAACGAGCAAGCT 116742
Query 204316 GTTGCGCACACCGTATTTTTGG-ACCCTGCG-CTTCAGAGAGGTCCAGTCGTGCATCGCA 204373
|||||| ||||| || |||| | || || |||||| || ||||||| | ||
Sbjct 116741 GTTGCGGACACC--ATGCTTGGCAATCTCCGCCTTCAGTGAACTCCAGTCCCAAAGGTCA 116684
Query 204374 CTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGA 204415
| || || | ||||||||||| |||||| |||||| |||
Sbjct 116683 GTAGGGGTCTTGTCCCACATGTCGTACTGAAGGATGCCCTGA 116642
>seq723
Length=18298
Score = 104 bits (114), Expect = 4e-17
Identities = 140/195 (72%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 203867 ACGGCAGGCCTGCTTCTCAGATAGTACATGCCGGTCTTTAGGCCCTTCTGCCACCCGTAC 203926
|| ||||| || ||||| |||||||||||| ||||||| ||||||| ||| | ||
Sbjct 4410 ACTGCAGGTCTAGATCTCAAATAGTACATGCCAGTCTTTAATCCCTTCTTCCAGGCATAA 4469
Query 203927 ATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGCCATGTGAATGTTCAGAGACTGG 203986
| |||||| || | || ||||| | ||| || ||||| | | |||| ||| ||
Sbjct 4470 AAGTGCATAGAGGTCAATTTGCCAAAGTTTGGTTCGGCAGTAAACAAATTCATAGATTGA 4529
Query 203987 CTTTGGTCGATGAAAGGCGCCCGATCTGCGGCCATATTGATAATGGTCTTCTGCGAAATC 204046
||||||||| |||| | | ||| |||||||| | ||||| || | || ||||||
Sbjct 4530 GATTGGTCGATAAAAGCTCCTCTATCAGCGGCCATGTCAATAATAGTTCTTTGTGAAATC 4589
Query 204047 TCCCACACCGTCTTG 204061
||||| || || |||
Sbjct 4590 TCCCATACTGTTTTG 4604
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795146821052080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |