Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017 -02-15] 843 sequences; 47,573,060 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq810 129 7e-25 seq812 125 8e-24 seq799 93.3 5e-14 >seq810 Length=1034423 Score = 129 bits (142), Expect = 7e-25 Identities = 140/183 (77%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463 |||| ||||| ||||||||| |||||||| | || ||||||||||| |||||||| | Sbjct 583011 CCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCTTCGAGCTGCTTTCCGGCGAAGA 582952 Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523 ||| ||||||||||| | || | || |||||||||| |||||| ||||| ||| | Sbjct 582951 TCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGTTG 582893 Query 46524 -CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | ||||||| ||| || ||||| | || ||||| || |||||||| || || || Sbjct 582892 TCGATCGTGTCGGACGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 582833 Query 46583 AAG 46585 ||| Sbjct 582832 AAG 582830 >seq812 Length=913560 Score = 125 bits (138), Expect = 8e-24 Identities = 159/216 (74%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438 |||| ||||| |||| ||| ||||| ||||| ||||||||||| | || || || Sbjct 528537 CGCAGAACCAGGTGCAGGGTAGATTCCTTCTGGATGTTGTAGTCGGACAAGGTACGACCG 528596 Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498 || || |||||||| || || || |||| |||||||||||| | || | | |||||| Sbjct 528597 TCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCAGGAGGGATACCTTCCTTG 528656 Query 46499 TCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557 || ||||| |||| | ||| | | | |||||||| ||||| || |||| ||||| Sbjct 528657 TCTTGAATCTTGCTCTTCA-CGTTGTCAATTGTGTCGCTGGATTCAACCTCCAATGTGAT 528715 Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || ||||| |||| || |||||||| || ||||| Sbjct 528716 AGTCTTGCCAGTCAAAGTCTTAACAAAAATCTGCAT 528751 Score = 111 bits (122), Expect = 2e-19 Identities = 142/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||||||||| || ||||| | || || |||||||| || ||||| Sbjct 529016 CTCCTTCTGGATGTTGTAGTCGGAGAGTGTGCGGCCATCCTCAAGCTGCTTTCCAGCGAA 529075 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| || |||||||||| || | | |||||| ||| |||||| |||||| ||| Sbjct 529076 GATCAGACGTTGCTGGTCGGGAGGGATACCCTCCTTATCCTGGATCTTGCTCTTGA-CGT 529134 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | |||||| || || || || | ||||| || || || || || || || | Sbjct 529135 TGTCGATGGTGTCGGAAGACTCAACCTCGAGGGTGATAGTCTTTCCAGTAAGGGTCTTCA 529194 Query 46581 CAAAGATTTGCAT 46593 | ||||| ||||| Sbjct 529195 CGAAGATCTGCAT 529207 Score = 104 bits (114), Expect = 3e-17 Identities = 147/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 ||||| | | ||| | |||||| |||| || |||||| ||||| |||||||| || Sbjct 529209 CCTCCACGAAGACGGAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 529268 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || ||||| |||| || |||||||| || ||||| || | ||||||||||| | || Sbjct 529269 AGCGTGCGACCGTCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCAGGAGGG 529328 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCAC 46545 | | |||||||||| |||||| |||||| ||| | | | ||||| || || || Sbjct 529329 ATACCCTCCTTGTCCTGGATCTTGCTCTTGA-CGTTGTCGATGGTGTCCGAGGACTCGAC 529387 Query 46546 ATCCACCGTGATGGTTTTGCCCGT 46569 || | |||||||| || || || Sbjct 529388 CTCGAGGGTGATGGTCTTTCCAGT 529411 >seq799 Length=343686 Score = 93.3 bits (102), Expect = 5e-14 Identities = 80/99 (81%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||| || |||||||| |||| ||||||||||| || ||||| Sbjct 28800 CTCCTTCTGGATGTTGTAGTCCGAGAGAGTGCGACCGTCCTCGAGCTGCTTACCAGCGAA 28859 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500 |||| ||||||||||| | || | | ||||||||| Sbjct 28860 GATCAGACGCTGCTGGTCAGGGGGGATACCCTCCTTGTC 28898 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565232443800360