Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017
-02-15] 843 sequences; 47,573,060 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq657 172 5e-38
seq812 118 1e-21
seq810 111 2e-19
seq799 86.0 6e-12
seq744 82.4 8e-11
>seq657
Length=446211
Score = 172 bits (190), Expect = 5e-38
Identities = 204/276 (74%), Gaps = 3/276 (1%)
Strand=Plus/Plus
Query 133167 GTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAA 133226
||||||||||||||| || || | || ||||| | ||||||||| ||| || ||
Sbjct 212403 GTAGGTGTCGATGAGAAGGGAGTATGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAA 212462
Query 133227 GCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATT 133286
||||| ||||| || ||||| ||||| || || | |||||||||||| || ||
Sbjct 212463 ACCGTAGAAGCAACGAGCCTCAGGGACCTGGACCTCGCCACTGAAACGCTCGACGAGGTT 212522
Query 133287 TTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCG 133346
||||||||||||||||| |||||||| || ||||| || || |||||| | |||
Sbjct 212523 CTCGTTGACGATGCCGTCAGACGCGGCGAAGAAAGCCAGGACATGGGAGATGAAGTAGCG 212582
Query 133347 CTCGTTGTCGTTCAAGCG---CTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTC 133403
||||| | ||| | ||| | ||||||| || |||||||||||| || | ||||||
Sbjct 212583 CTCGTCATTGTTGAGGCGGTTGTTCCAGTCGTGCAGGTCCTTGGACAGATCGATCTCCTC 212642
Query 133404 GACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439
| ||||| || || ||||| || || ||||||||
Sbjct 212643 AGCAGTCCAGAAGGAAGCCTCTGCCTTCTTGTACAT 212678
Score = 147 bits (162), Expect = 2e-30
Identities = 299/438 (68%), Gaps = 6/438 (1%)
Strand=Plus/Plus
Query 132666 CATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGGTGCCGATCAGGTCGACGAGCAG 132725
||| || || |||||||| | | |||||||| ||| || | || ||| |||||
Sbjct 211843 CATGAAGTCGAAGGGGTTTGTGGCGTTGTAGTACTTCTTGTTGCCAAGAGAGACCAGCAG 211902
Query 132726 CCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGCAGACG 132785
| |||||| |||||||||||||| || ||||| | | | || | || || ||
Sbjct 211903 GCGGTCGGCAACGAACTCGATGTACTGGCACATGAGCTTGGAGTTCATACCAAGGAGGGC 211962
Query 132786 CACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTC 132845
|| || || || || || || || ||||| ||| |||| || || || ||| |
Sbjct 211963 AACGGGGAGGGCGTCCGTCAGGAACTCCTGCTCAATGTCGACGGCATCAACGATGATCTT 212022
Query 132846 CCTAACGCGCGCCGC-GCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGT 132904
| || | | | | ||| |||| | | || ||||| || ||||| ||||
Sbjct 212023 CTCGACAACCTCAGGTGAGGGGCGGTTGTTC-AGGTGGGAGAACAGCAGACAAGCGAAGT 212081
Query 132905 CGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGA 132964
|| |||| ||||| || | || || || ||||| ||| |||| || |||||||
Sbjct 212082 CGGTGTGCAGACCCTCATCACGAGAGATCAGCTCGTTAGAGAAGGTCAGACCAGGCATGA 212141
Query 132965 GGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGA 133024
|||| || || || ||||| || || | ||||||| ||| || ||||||| ||||| |
Sbjct 212142 GGCCACGCTTCTTCAGCCAGAAGATAGAGGCGAAAGAGCCAGAGAAGAAGATACCCTCAA 212201
Query 133025 CGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGG-CTTCTT-TGCTGGCGATCCAGCG 133082
| || ||||| || |||| ||||| | |||| |||| || ||| | ||| |||||||||
Sbjct 212202 CAGCAGCGAAGGCAACCAAGCGCTGGGCGAAAGTGGACTCCTTGTCCTG--GATCCAGCG 212259
Query 133083 CAGCGCCCATTCGGCCTT 133100
| ||||| ||||||||
Sbjct 212260 AATGGCCCAGTCGGCCTT 212277
>seq812
Length=913560
Score = 118 bits (130), Expect = 1e-21
Identities = 146/196 (74%), Gaps = 4/196 (2%)
Strand=Plus/Minus
Query 38266 TCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAAA 38324
|||| || || ||||||||| |||| |||||| || | |||| | | | |||| | ||
Sbjct 529413 TCACTGGAAAGACCATCACCCTCGAGGTCGAGTCCTCGGACACCATCGACAACG--TCAA 529356
Query 38325 GAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGG 38383
|| || |||| ||||| ||||| || || | ||||| ||||| ||||| | ||| ||
Sbjct 529355 GAGCAAGATCCAGGACAAGGAGGGTATCCCTCCTGACCAGCAGCGTCTCATCTTCGCTGG 529296
Query 38384 CAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCT 38443
|| ||||| || |||| ||||| ||| |||||||||||||| ||||| | || ||
Sbjct 529295 AAAGCAGCTTGAGGACGGTCGCACGCTCTCTGACTACAACATCCAGAAGGAGTCCACCCT 529236
Query 38444 GCATTTGGTGCTGCGT 38459
||| ||||||| |||
Sbjct 529235 GCACCTGGTGCTCCGT 529220
Score = 107 bits (118), Expect = 2e-18
Identities = 156/217 (72%), Gaps = 4/217 (2%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || || || || || || |||||| |||| || ||| | ||
Sbjct 529207 ATGCAGATCTTCGTGAAGACCCTTACTGGAAAGACTATCACCCTCGAGGTTGAGTCTTCC 529148
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361
|||| | | | |||| | |||| || |||| || || ||||| || || ||||||
Sbjct 529147 GACACCATCGACAACG--TCAAGAGCAAGATCCAGGATAAGGAGGGTATCCCTCCCGACC 529090
Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421
| || || || || | ||| || || ||||| || || | ||||| ||| ||||||||
Sbjct 529089 AGCAACGTCTGATCTTCGCTGGAAAGCAGCTTGAGGATGGCCGCACACTCTCCGACTACA 529030
Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
||||||| ||||| |||| || || | || |||||
Sbjct 529029 ACATCCAGAAGGAGTCGACCCTTCACCTCGTCCTGCG 528993
Score = 89.7 bits (98), Expect = 5e-13
Identities = 152/217 (70%), Gaps = 4/217 (2%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || || || | || ||||| || ||||| | || || || ||| |
Sbjct 528751 ATGCAGATTTTTGTTAAGACTTTGACTGGCAAGACTATCACATTGGAGGTTGAATCCAGC 528692
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361
|||| | | |||| | |||| || || | ||||| || || || || | ||||
Sbjct 528691 GACACAATTGACAACG--TGAAGAGCAAGATTCAAGACAAGGAAGGTATCCCTCCTGACC 528634
Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421
| ||||| || || | || || || |||||||| |||| || ||| | ||||||||
Sbjct 528633 AGCAGCGCCTGATCTTTGCTGGTAAGCAGCTGGAGGACGGTCGTACCTTGTCCGACTACA 528574
Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
||||||| |||||| | || ||||| |||| |||||
Sbjct 528573 ACATCCAGAAGGAATCTACCCTGCACCTGGTTCTGCG 528537
>seq810
Length=1034423
Score = 111 bits (122), Expect = 2e-19
Identities = 140/190 (74%), Gaps = 2/190 (1%)
Strand=Plus/Plus
Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312
||||| || || || ||||| || ||||| ||| |||| |||||| | |||||| |
Sbjct 582831 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGATGTCGAGTCGTCCGACACGATC 582890
Query 38313 CA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCT 38371
| |||| | || | || |||| ||||| ||||| |||||| | ||||| ||||| ||
Sbjct 582891 GACAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGTCT 582949
Query 38372 CATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAA 38431
|| | ||| || || ||||| || || | ||||| || | ||||||||||||||| ||
Sbjct 582950 GATCTTCGCCGGAAAGCAGCTCGAAGATGGCCGCACTCTGAGCGACTACAACATCCAGAA 583009
Query 38432 GGAAGCGACG 38441
|| | ||||
Sbjct 583010 GGTATGGACG 583019
>seq799
Length=343686
Score = 86.0 bits (94), Expect = 6e-12
Identities = 92/122 (75%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396
||||| ||||| || ||| | ||||| ||||| || || | ||| || || ||||| ||
Sbjct 28898 GACAAGGAGGGTATCCCCCCTGACCAGCAGCGTCTGATCTTCGCTGGTAAGCAGCTCGAG 28839
Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456
|||| ||||| ||| |||||||||||||| ||||| |||| || || | |||||
Sbjct 28838 GACGGTCGCACTCTCTCGGACTACAACATCCAGAAGGAGTCGACCCTTCACCTCGTGCTC 28779
Query 38457 CG 38458
||
Sbjct 28778 CG 28777
>seq744
Length=38458
Score = 82.4 bits (90), Expect = 8e-11
Identities = 111/155 (72%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 132895 CAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAG 132954
||||||||||| ||| | ||| || || | | || | ||| |||||||| |||||
Sbjct 30833 CAAGCAAAGTCAGTATGAAGGCCTTCATCACGACAGATCAATTCATTGCTGAATGTCAAA 30892
Query 132955 CCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAG 133014
|| ||||| | || ||||| ||||||||||| |||| || || || || |||||
Sbjct 30893 CCAGGCATCAAACCACGTTTCTTGAGCCAAAAAATGGAAGCAAAGGAACCAGAGAAGAAA 30952
Query 133015 ACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTC 133049
| || ||||| || || || || || || |||||
Sbjct 30953 ATACCTTCGACAGCAGCAAAGGCAACAAGACGCTC 30987
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500167529429120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |