Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017 -02-15] 843 sequences; 47,573,060 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq657 172 5e-38 seq812 118 1e-21 seq810 111 2e-19 seq799 86.0 6e-12 seq744 82.4 8e-11 >seq657 Length=446211 Score = 172 bits (190), Expect = 5e-38 Identities = 204/276 (74%), Gaps = 3/276 (1%) Strand=Plus/Plus Query 133167 GTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAA 133226 ||||||||||||||| || || | || ||||| | ||||||||| ||| || || Sbjct 212403 GTAGGTGTCGATGAGAAGGGAGTATGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAA 212462 Query 133227 GCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATT 133286 ||||| ||||| || ||||| ||||| || || | |||||||||||| || || Sbjct 212463 ACCGTAGAAGCAACGAGCCTCAGGGACCTGGACCTCGCCACTGAAACGCTCGACGAGGTT 212522 Query 133287 TTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCG 133346 ||||||||||||||||| |||||||| || ||||| || || |||||| | ||| Sbjct 212523 CTCGTTGACGATGCCGTCAGACGCGGCGAAGAAAGCCAGGACATGGGAGATGAAGTAGCG 212582 Query 133347 CTCGTTGTCGTTCAAGCG---CTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTC 133403 ||||| | ||| | ||| | ||||||| || |||||||||||| || | |||||| Sbjct 212583 CTCGTCATTGTTGAGGCGGTTGTTCCAGTCGTGCAGGTCCTTGGACAGATCGATCTCCTC 212642 Query 133404 GACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 | ||||| || || ||||| || || |||||||| Sbjct 212643 AGCAGTCCAGAAGGAAGCCTCTGCCTTCTTGTACAT 212678 Score = 147 bits (162), Expect = 2e-30 Identities = 299/438 (68%), Gaps = 6/438 (1%) Strand=Plus/Plus Query 132666 CATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGGTGCCGATCAGGTCGACGAGCAG 132725 ||| || || |||||||| | | |||||||| ||| || | || ||| ||||| Sbjct 211843 CATGAAGTCGAAGGGGTTTGTGGCGTTGTAGTACTTCTTGTTGCCAAGAGAGACCAGCAG 211902 Query 132726 CCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGCAGACG 132785 | |||||| |||||||||||||| || ||||| | | | || | || || || Sbjct 211903 GCGGTCGGCAACGAACTCGATGTACTGGCACATGAGCTTGGAGTTCATACCAAGGAGGGC 211962 Query 132786 CACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTC 132845 || || || || || || || || ||||| ||| |||| || || || ||| | Sbjct 211963 AACGGGGAGGGCGTCCGTCAGGAACTCCTGCTCAATGTCGACGGCATCAACGATGATCTT 212022 Query 132846 CCTAACGCGCGCCGC-GCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGT 132904 | || | | | | ||| |||| | | || ||||| || ||||| |||| Sbjct 212023 CTCGACAACCTCAGGTGAGGGGCGGTTGTTC-AGGTGGGAGAACAGCAGACAAGCGAAGT 212081 Query 132905 CGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGA 132964 || |||| ||||| || | || || || ||||| ||| |||| || ||||||| Sbjct 212082 CGGTGTGCAGACCCTCATCACGAGAGATCAGCTCGTTAGAGAAGGTCAGACCAGGCATGA 212141 Query 132965 GGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGA 133024 |||| || || || ||||| || || | ||||||| ||| || ||||||| ||||| | Sbjct 212142 GGCCACGCTTCTTCAGCCAGAAGATAGAGGCGAAAGAGCCAGAGAAGAAGATACCCTCAA 212201 Query 133025 CGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGG-CTTCTT-TGCTGGCGATCCAGCG 133082 | || ||||| || |||| ||||| | |||| |||| || ||| | ||| ||||||||| Sbjct 212202 CAGCAGCGAAGGCAACCAAGCGCTGGGCGAAAGTGGACTCCTTGTCCTG--GATCCAGCG 212259 Query 133083 CAGCGCCCATTCGGCCTT 133100 | ||||| |||||||| Sbjct 212260 AATGGCCCAGTCGGCCTT 212277 >seq812 Length=913560 Score = 118 bits (130), Expect = 1e-21 Identities = 146/196 (74%), Gaps = 4/196 (2%) Strand=Plus/Minus Query 38266 TCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAAA 38324 |||| || || ||||||||| |||| |||||| || | |||| | | | |||| | || Sbjct 529413 TCACTGGAAAGACCATCACCCTCGAGGTCGAGTCCTCGGACACCATCGACAACG--TCAA 529356 Query 38325 GAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGG 38383 || || |||| ||||| ||||| || || | ||||| ||||| ||||| | ||| || Sbjct 529355 GAGCAAGATCCAGGACAAGGAGGGTATCCCTCCTGACCAGCAGCGTCTCATCTTCGCTGG 529296 Query 38384 CAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCT 38443 || ||||| || |||| ||||| ||| |||||||||||||| ||||| | || || Sbjct 529295 AAAGCAGCTTGAGGACGGTCGCACGCTCTCTGACTACAACATCCAGAAGGAGTCCACCCT 529236 Query 38444 GCATTTGGTGCTGCGT 38459 ||| ||||||| ||| Sbjct 529235 GCACCTGGTGCTCCGT 529220 Score = 107 bits (118), Expect = 2e-18 Identities = 156/217 (72%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || || || || || |||||| |||| || ||| | || Sbjct 529207 ATGCAGATCTTCGTGAAGACCCTTACTGGAAAGACTATCACCCTCGAGGTTGAGTCTTCC 529148 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | | |||| | |||| || |||| || || ||||| || || |||||| Sbjct 529147 GACACCATCGACAACG--TCAAGAGCAAGATCCAGGATAAGGAGGGTATCCCTCCCGACC 529090 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | || || || || | ||| || || ||||| || || | ||||| ||| |||||||| Sbjct 529089 AGCAACGTCTGATCTTCGCTGGAAAGCAGCTTGAGGATGGCCGCACACTCTCCGACTACA 529030 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||||||| ||||| |||| || || | || ||||| Sbjct 529029 ACATCCAGAAGGAGTCGACCCTTCACCTCGTCCTGCG 528993 Score = 89.7 bits (98), Expect = 5e-13 Identities = 152/217 (70%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || | || ||||| || ||||| | || || || ||| | Sbjct 528751 ATGCAGATTTTTGTTAAGACTTTGACTGGCAAGACTATCACATTGGAGGTTGAATCCAGC 528692 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | |||| | |||| || || | ||||| || || || || | |||| Sbjct 528691 GACACAATTGACAACG--TGAAGAGCAAGATTCAAGACAAGGAAGGTATCCCTCCTGACC 528634 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| || || | || || || |||||||| |||| || ||| | |||||||| Sbjct 528633 AGCAGCGCCTGATCTTTGCTGGTAAGCAGCTGGAGGACGGTCGTACCTTGTCCGACTACA 528574 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||||||| |||||| | || ||||| |||| ||||| Sbjct 528573 ACATCCAGAAGGAATCTACCCTGCACCTGGTTCTGCG 528537 >seq810 Length=1034423 Score = 111 bits (122), Expect = 2e-19 Identities = 140/190 (74%), Gaps = 2/190 (1%) Strand=Plus/Plus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || || ||||| || ||||| ||| |||| |||||| | |||||| | Sbjct 582831 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGATGTCGAGTCGTCCGACACGATC 582890 Query 38313 CA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCT 38371 | |||| | || | || |||| ||||| ||||| |||||| | ||||| ||||| || Sbjct 582891 GACAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGTCT 582949 Query 38372 CATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAA 38431 || | ||| || || ||||| || || | ||||| || | ||||||||||||||| || Sbjct 582950 GATCTTCGCCGGAAAGCAGCTCGAAGATGGCCGCACTCTGAGCGACTACAACATCCAGAA 583009 Query 38432 GGAAGCGACG 38441 || | |||| Sbjct 583010 GGTATGGACG 583019 >seq799 Length=343686 Score = 86.0 bits (94), Expect = 6e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396 ||||| ||||| || ||| | ||||| ||||| || || | ||| || || ||||| || Sbjct 28898 GACAAGGAGGGTATCCCCCCTGACCAGCAGCGTCTGATCTTCGCTGGTAAGCAGCTCGAG 28839 Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456 |||| ||||| ||| |||||||||||||| ||||| |||| || || | ||||| Sbjct 28838 GACGGTCGCACTCTCTCGGACTACAACATCCAGAAGGAGTCGACCCTTCACCTCGTGCTC 28779 Query 38457 CG 38458 || Sbjct 28778 CG 28777 >seq744 Length=38458 Score = 82.4 bits (90), Expect = 8e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 132895 CAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAG 132954 ||||||||||| ||| | ||| || || | | || | ||| |||||||| ||||| Sbjct 30833 CAAGCAAAGTCAGTATGAAGGCCTTCATCACGACAGATCAATTCATTGCTGAATGTCAAA 30892 Query 132955 CCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAG 133014 || ||||| | || ||||| ||||||||||| |||| || || || || ||||| Sbjct 30893 CCAGGCATCAAACCACGTTTCTTGAGCCAAAAAATGGAAGCAAAGGAACCAGAGAAGAAA 30952 Query 133015 ACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTC 133049 | || ||||| || || || || || || ||||| Sbjct 30953 ATACCTTCGACAGCAGCAAAGGCAACAAGACGCTC 30987 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500167529429120