Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017 -02-15] 843 sequences; 47,573,060 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq609 116 1e-20 seq812 98.7 4e-15 >seq609 Length=32548 Score = 116 bits (128), Expect = 1e-20 Identities = 117/152 (77%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 391107 TCTGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGAT 391166 ||||| | |||||| | | || ||||| || |||||||||||||| || ||||||||| Sbjct 20850 TCTGACACCATTGACAATGTCAAGCAAAAGATCCAAGATAAGGAAGGTATCCCTCCTGAT 20909 Query 391167 CAACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTAT 391226 ||||||||| | |||||| | || |||||||| ||||| || | || ||| ||||| Sbjct 20910 CAACAACGTCTCATTTTCGCCGGTAAACAACTCGAAGACGGTCGTACCTTGAGTGATTAC 20969 Query 391227 AATATTGATAAGGATGCAACACTTCACTTAGT 391258 || ||| | ||||| | || |||||||| || Sbjct 20970 AACATTCAAAAGGAATCTACCCTTCACTTGGT 21001 >seq812 Length=913560 Score = 98.7 bits (108), Expect = 4e-15 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| || || ||||| || || ||||||||||| || || ||||| || Sbjct 528979 ATGCAGATTTTCGTCAAGACTCTGACCGGCAAGACTATTACTCTGGAAGTCGAATCGTCA 528920 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||| || | || || || |||||||| ||||| || ||||| || || Sbjct 528919 GATACCATCGATAACGTCAAGAGCAAGATCCAAGATAAAGAAGGCATCCCTCCCGACCAG 528860 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||| | || || | || || || | |||||||| | || ||| | ||||| || Sbjct 528859 CAGCGTCTTATCTTTGCTGGTAAGCAGTTGGAAGATGGCCGCACCTTGTCCGATTACAAC 528800 Query 391230 ATTGATAAGGATGCAACACTTCAC 391253 ||| | ||||| | || || ||| Sbjct 528799 ATTCAGAAGGAGTCTACTCTCCAC 528776 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975697060389044