Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017 -02-15] 843 sequences; 47,573,060 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq205 205 7e-47 seq78 113 3e-19 seq723 107 1e-17 seq314 86.0 5e-11 seq245 86.0 5e-11 seq244 86.0 5e-11 seq157 86.0 5e-11 >seq205 Length=39400 Score = 205 bits (226), Expect = 7e-47 Identities = 651/1001 (65%), Gaps = 24/1001 (2%) Strand=Plus/Plus Query 517274 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGT 517333 ||||| |||||||| | ||| || || ||||| |||||||| || || | | ||||| Sbjct 3598 ATACCGTTGGCATCAACATCGAAAGTAACTTCGATTTGAGGAACACCACGAGGGGCAGGA 3657 Query 517334 GGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCA 517393 || || || | | || | || ||| || ||||| || || |||||| Sbjct 3658 GGAATACCAGTAAGTTCGAACTTACCGAGAAGGTTGTTATCCTTGGTACGAGCACGTTCA 3717 Query 517394 CCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTG 517453 || ||| ||| |||||| || ||| ||| ||||| | || || | || | | | Sbjct 3718 CCTTCGTAAACTTGGATGAGGACACCAGGTTGGTTATCGGCGTAGGTAGAGAAGATTTCG 3777 Query 517454 GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCTGCT 517513 || || || |||| || ||||| | | |||| | ||||| | |||||| || Sbjct 3778 GACTTCTTGGTGGGAACAGTGGTGTTACGCTTGATAAGAGCAGTCATGACACCACCAGCG 3837 Query 517514 GTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCA 517573 ||||| | ||| || |||||||||| || || | || | || | ||| ||||| Sbjct 3838 GTTTCAATACCGAGGGAAAGAGGAGCAACGTCCAAAAGAAGAAGGTCTTGGGTCTTTTCG 3897 Query 517574 TCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCA 517633 ||| | |||| ||||| || ||||| | |||||||||||| ||||||||||||||| Sbjct 3898 GAAGTGTCACCAGAGAGAATGGCAGCTTGGACAGCAGCACCATAGGCAACAGCTTCATCA 3957 Query 517634 GGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCTTACC 517693 || || | | | || ||| ||||| ||||| || | |||| | | | ||| Sbjct 3958 GGGTTGATGGACTTGTTGGGTTCCTTACCGTTGAAGAAGTCAGAAACCAACTTTTGAACC 4017 Query 517694 TTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCCAGT 517753 || |||||||| | || || || || | ||||| || || || || || || || | Sbjct 4018 TTGGGAATACGGGTGGAACCACCGACGAGGACAATATCGTGAACTTGAGACTTGTCAATC 4077 Query 517754 TTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAACAAGTCT--GAAC 517811 || || || | || ||||| || ||||| | | || | ||| | | Sbjct 4078 TTGGAGTCACGAAGGACCTTTTCGACAGGTTCCATGGTATTACGGAAGAGATCTTGGTTC 4137 Query 517812 AAAGTTCTTCGAATTTAGCTCTAGT--AAGA-GTGACATTATAA-TCAATTCCTTCGAAC 517867 || ||||||||| ||| | ||| |||| ||| || || |||| |||||||| Sbjct 4138 AA--TTCTTCGAAACGAGCACGAGTCAAAGAGGTG----TAGAAGTCAACACCTTCGAAG 4191 Query 517868 AAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCA 517927 | ||| || | ||| || || ||||||| | |||||| | | ||| |||||||||||| Sbjct 4192 AGAGAGTCGATTTCGATGGTGGTTTGAGCAGCAGAAGACAAGGTACGCTTAGCACGTTCA 4251 Query 517928 CATGCTGTCCTTAGTCTTCGTA-AG-----GCTTTTGCTGATTGATTCAAATCTGTTTTA 517981 || || || | || | || | || || || | || ||| || | || Sbjct 4252 CAAGCAGTACGAAGACGACGGACAGCACGAGCGTTACCAGA--GAT----GTCCTTCTTG 4305 Query 517982 TATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCT 518041 | || | |||||| |||| | | | |||||||| ||||| ||||||||||| Sbjct 4306 AACTTGCGCTTGAATTCTTGCATGAAGTGGTTGACAAGACGGTTATCGAAATCTTCACCA 4365 Query 518042 CCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAA 518101 ||||| | ||| | || | ||||| | |||| ||| | |||||||| | | ||| Sbjct 4366 CCCAAGTGAGTGTCACCAGCAGTAGCCTTGACTTCGAAGATACCATCTTCGATGGTCAAG 4425 Query 518102 AGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCT 518161 |||| ||||| ||| ||||| |||| ||| || || | || || ||| || Sbjct 4426 AGAGAGACATCGAAGGTACCACCTCCCAAATCGAAGATCAAAACGTTACGTTCACCTTCA 4485 Query 518162 TGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAA 518221 || || || | ||| || |||| ||| || ||||| ||||| || || || | | Sbjct 4486 ACCTTCTTGTCCAAACCGTAGGCAATAGCGGCGGCAGTGGGTTCGTTGATGATACGTTGA 4545 Query 518222 ACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTG 518262 || || | ||| ||||| || ||||| || ||||| || Sbjct 4546 ACGTTCAAACCGGCAATCAAACCAGCATCCTTGGTGGCCTG 4586 >seq78 Length=13793 Score = 113 bits (124), Expect = 3e-19 Identities = 363/550 (66%), Gaps = 19/550 (3%) Strand=Plus/Plus Query 517388 CGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAAT 517447 |||||||| ||| | | ||| ||| || ||||| ||||| | | ||| || || Sbjct 8955 CGTTCACCTTCGTAGACAGGGAAAGTGACAGTGGTTTGGTTATCGGCAGCAGTGGTGAAG 9014 Query 517448 ACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCA 517507 || |||| |||| |||||| || | ||||| | || | | | ||| |||||| Sbjct 9015 ACCTTGGACTTTTGACAAGGGATAGGGGTGTTACGGGGAACGACAACAGCCATGATACCA 9074 Query 517508 CCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGT 517567 ||| |||| | |||||||||||||||| |||||| | | || | | |||| Sbjct 9075 CCTTGCATTTCAACACCAAGAGAAAGAGGAACGACATCCAACAAGAGGAGGTCTTGAGTC 9134 Query 517568 TTTTCAT---CAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACA 517624 ||||| | ||| ||| |||| ||| ||||||| ||||||||| || |||||| Sbjct 9135 TTTTCGTTACCAGCTTGGTTGGTGAGAACAGCGGCTTGAACAGCAGCACCGTAGGCAACA 9194 Query 517625 GCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAAT-TTGAAAGAAG 517683 |||||||||||||| | | | || | || || ||| || | || ||| | || | Sbjct 9195 GCTTCATCAGGATTGATGGACTTGTTCAATTCCTTGCCACCAAAGAGATCTTGGAGGAGG 9254 Query 517684 --TTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGT 517741 ||| | ||| || ||||| | || || || || | || ||||| | || ||| Sbjct 9255 GATTG---GATCTTGGGGATACGGGTAGAACCACCGACAAGAACGATTTCGT-CA-ATGT 9309 Query 517742 GAT--TTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTC--AAGACCCGCTCT 517797 | || || | || | |||| || || ||| |||||||| || ||| | Sbjct 9310 CCTTCTTGTCAACCTTGGCATCCTTCAAGACGCGTTCGACGGGTTCGATAGTACCG-GCG 9368 Query 517798 AAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAA-TCAA 517856 ||| || | || | |||||| || || || | ||| | || ||| || || | Sbjct 9369 AAAGCAG-CAGAGTTGATTTCTTCAAACTTGGCACGAGTGA-TGTTGGATTGGAAGTCGA 9426 Query 517857 TTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTT 517916 | |||||||| | ||| |||||||| | || ||||| ||| ||||||| | | ||| | Sbjct 9427 TGCCTTCGAAGAGAGAGTCAACTTCGACAGTGGTTTGGGTCAAAGAAGACAAGGTACGCT 9486 Query 517917 TAGCACGTTC 517926 |||||||||| Sbjct 9487 TAGCACGTTC 9496 Score = 86.0 bits (94), Expect = 5e-11 Identities = 109/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 518503 ACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTT 518562 ||| || || || || || || |||| || || | || || || |||||||| | || Sbjct 10229 ACCGATCAAACGCTTGGCGTCGAAAACGGTGTTCTTGGGGTTCATGGCAGCTTGGTTCTT 10288 Query 518563 GGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCG 518622 ||| ||||| ||||| ||| | || | || | || | ||||| || ||||| || || Sbjct 10289 GGCAGCATCACCAATGAGACGCTCCTTATCAGAGAAAGCGACATAGGAGGGAGTGGTACG 10348 Query 518623 ATTACCTTGATCATTCGCAATAATTTCAAC 518652 |||||||| || || |||||||||||||| Sbjct 10349 GTTACCTTGTTCGTTGGCAATAATTTCAAC 10378 >seq723 Length=18298 Score = 107 bits (118), Expect = 1e-17 Identities = 146/203 (72%), Gaps = 2/203 (1%) Strand=Plus/Minus Query 400488 AAAGCTATTTACCGGACTGTTTGGGAAATTCCTCAAAAATCCATCATTGAAATGGCAGCT 400547 |||||||| || || || ||||| ||| | |||| | | || ||||| ||||| ||| Sbjct 4613 AAAGCTAT--ACAAAACAGTATGGGAGATTTCACAAAGAACTATTATTGACATGGCCGCT 4556 Query 400548 GATAGAGCACCTTTTGTTGATCAAACTCAGAGTATGAATTTGTACATTGATAAACCTAGT 400607 ||||||| | ||||| | || ||| |||| ||||||||||| | || |||| | Sbjct 4555 GATAGAGGAGCTTTTATCGACCAATCTCAATCTATGAATTTGTTTACTGCCGAACCAAAC 4496 Query 400608 TTTGCAAGATTAAATTCTTGTCTATTTTATGCATGGAGGAAAGGTCTCAAAACCGGTATG 400667 |||| | ||| | ||| | |||||||| |||| ||| || | || || || ||| Sbjct 4495 TTTGGCAAATTGACCTCTATGCACTTTTATGCCTGGAAGAAGGGATTAAAGACTGGCATG 4436 Query 400668 TATTATTTGAGATCTAAACCAGC 400690 || ||||||||||||| ||| || Sbjct 4435 TACTATTTGAGATCTAGACCTGC 4413 >seq314 Length=23708 Score = 86.0 bits (94), Expect = 5e-11 Identities = 181/264 (69%), Gaps = 11/264 (4%) Strand=Plus/Plus Query 756270 GCCTGTTTGTATGCAGGTATTAAAATTTCTGGAACTAATTTAGAAGTAGCTCCTGGACAA 756329 || || |||||||||||| | || ||||| || ||| ||||| ||||| || ||| Sbjct 18811 GCTTGCTTGTATGCAGGTGTCAACATTTCAGGTGTCAATGCTGAAGTGGCTCCAGGTCAA 18870 Query 756330 CATGAATTTCAAATTGGTCC-TGTCGAAGGAATTGATGCAGCTGATCAATTATGGATAGC 756388 |||||||||| | ||||| ||| ||||| |||| | | ||||| | ||||| | Sbjct 18871 TTTGAATTTCAAGTAGGTCCATGT-GAAGGTATTGGTATGGGAGATCATCTTTGGATTTC 18929 Query 756389 CAGATTTATTTTGGAAAAGATTAGCGAACATTACGATCGCTAT-ATTGT---TTATCATC 756444 | | ||| |||||| || ||| | | | | ||| ||||| | ||||| Sbjct 18930 TCGTTATATCTTGGAACGTGTTTCAGAAGACT----TTGGTATCATTGTCTCTATTCATC 18985 Query 756445 CTAAACCTCTTCAAGGAGACTGGAATGGGTCTGGATGTCATACAAATTTTAGTACAGAAT 756504 |||| ||| | | || || ||||| || |||| ||||| ||||| ||| ||| ||| Sbjct 18986 CTAAGCCTATCAAGGGTGATTGGAACGGCGCTGGTTGTCACACAAACTTTTCTACTGAAG 19045 Query 756505 CAATGCGATCAGAAGGTGG-ATTG 756527 |||||| ||| ||||| |||| Sbjct 19046 AAATGCGTCAAGAGGGTGGTATTG 19069 >seq245 Length=22460 Score = 86.0 bits (94), Expect = 5e-11 Identities = 181/264 (69%), Gaps = 11/264 (4%) Strand=Plus/Minus Query 756270 GCCTGTTTGTATGCAGGTATTAAAATTTCTGGAACTAATTTAGAAGTAGCTCCTGGACAA 756329 || || |||||||||||| | || ||||| || ||| ||||| ||||| || ||| Sbjct 3650 GCTTGCTTGTATGCAGGTGTCAACATTTCAGGTGTCAATGCTGAAGTGGCTCCAGGTCAA 3591 Query 756330 CATGAATTTCAAATTGGTCC-TGTCGAAGGAATTGATGCAGCTGATCAATTATGGATAGC 756388 |||||||||| | ||||| ||| ||||| |||| | | ||||| | ||||| | Sbjct 3590 TTTGAATTTCAAGTAGGTCCATGT-GAAGGTATTGGTATGGGAGATCATCTTTGGATTTC 3532 Query 756389 CAGATTTATTTTGGAAAAGATTAGCGAACATTACGATCGCTAT-ATTGT---TTATCATC 756444 | | ||| |||||| || ||| | | | | ||| ||||| | ||||| Sbjct 3531 TCGTTATATCTTGGAACGTGTTTCAGAAGACT----TTGGTATCATTGTCTCTATTCATC 3476 Query 756445 CTAAACCTCTTCAAGGAGACTGGAATGGGTCTGGATGTCATACAAATTTTAGTACAGAAT 756504 |||| ||| | | || || ||||| || |||| ||||| ||||| ||| ||| ||| Sbjct 3475 CTAAGCCTATCAAGGGTGATTGGAACGGCGCTGGTTGTCACACAAACTTTTCTACTGAAG 3416 Query 756505 CAATGCGATCAGAAGGTGG-ATTG 756527 |||||| ||| ||||| |||| Sbjct 3415 AAATGCGTCAAGAGGGTGGTATTG 3392 >seq244 Length=22460 Score = 86.0 bits (94), Expect = 5e-11 Identities = 181/264 (69%), Gaps = 11/264 (4%) Strand=Plus/Minus Query 756270 GCCTGTTTGTATGCAGGTATTAAAATTTCTGGAACTAATTTAGAAGTAGCTCCTGGACAA 756329 || || |||||||||||| | || ||||| || ||| ||||| ||||| || ||| Sbjct 3650 GCTTGCTTGTATGCAGGTGTCAACATTTCAGGTGTCAATGCTGAAGTGGCTCCAGGTCAA 3591 Query 756330 CATGAATTTCAAATTGGTCC-TGTCGAAGGAATTGATGCAGCTGATCAATTATGGATAGC 756388 |||||||||| | ||||| ||| ||||| |||| | | ||||| | ||||| | Sbjct 3590 TTTGAATTTCAAGTAGGTCCATGT-GAAGGTATTGGTATGGGAGATCATCTTTGGATTTC 3532 Query 756389 CAGATTTATTTTGGAAAAGATTAGCGAACATTACGATCGCTAT-ATTGT---TTATCATC 756444 | | ||| |||||| || ||| | | | | ||| ||||| | ||||| Sbjct 3531 TCGTTATATCTTGGAACGTGTTTCAGAAGACT----TTGGTATCATTGTCTCTATTCATC 3476 Query 756445 CTAAACCTCTTCAAGGAGACTGGAATGGGTCTGGATGTCATACAAATTTTAGTACAGAAT 756504 |||| ||| | | || || ||||| || |||| ||||| ||||| ||| ||| ||| Sbjct 3475 CTAAGCCTATCAAGGGTGATTGGAACGGCGCTGGTTGTCACACAAACTTTTCTACTGAAG 3416 Query 756505 CAATGCGATCAGAAGGTGG-ATTG 756527 |||||| ||| ||||| |||| Sbjct 3415 AAATGCGTCAAGAGGGTGGTATTG 3392 >seq157 Length=40733 Score = 86.0 bits (94), Expect = 5e-11 Identities = 181/264 (69%), Gaps = 11/264 (4%) Strand=Plus/Minus Query 756270 GCCTGTTTGTATGCAGGTATTAAAATTTCTGGAACTAATTTAGAAGTAGCTCCTGGACAA 756329 || || |||||||||||| | || ||||| || ||| ||||| ||||| || ||| Sbjct 21923 GCTTGCTTGTATGCAGGTGTCAACATTTCAGGTGTCAATGCTGAAGTGGCTCCAGGTCAA 21864 Query 756330 CATGAATTTCAAATTGGTCC-TGTCGAAGGAATTGATGCAGCTGATCAATTATGGATAGC 756388 |||||||||| | ||||| ||| ||||| |||| | | ||||| | ||||| | Sbjct 21863 TTTGAATTTCAAGTAGGTCCATGT-GAAGGTATTGGTATGGGAGATCATCTTTGGATTTC 21805 Query 756389 CAGATTTATTTTGGAAAAGATTAGCGAACATTACGATCGCTAT-ATTGT---TTATCATC 756444 | | ||| |||||| || ||| | | | | ||| ||||| | ||||| Sbjct 21804 TCGTTATATCTTGGAACGTGTTTCAGAAGACT----TTGGTATCATTGTCTCTATTCATC 21749 Query 756445 CTAAACCTCTTCAAGGAGACTGGAATGGGTCTGGATGTCATACAAATTTTAGTACAGAAT 756504 |||| ||| | | || || ||||| || |||| ||||| ||||| ||| ||| ||| Sbjct 21748 CTAAGCCTATCAAGGGTGATTGGAACGGCGCTGGTTGTCACACAAACTTTTCTACTGAAG 21689 Query 756505 CAATGCGATCAGAAGGTGG-ATTG 756527 |||||| ||| ||||| |||| Sbjct 21688 AAATGCGTCAAGAGGGTGGTATTG 21665 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780780567563158