Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017
-02-15] 843 sequences; 47,573,060 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq744 149 8e-31
seq578 132 6e-26
seq657 123 3e-23
seq347 113 6e-20
seq268 113 6e-20
seq723 109 7e-19
>seq744
Length=38458
Score = 149 bits (164), Expect = 8e-31
Identities = 291/417 (70%), Gaps = 11/417 (3%)
Strand=Plus/Minus
Query 101907 GCATTCTTTGCTGGGTCCGATGGAATTGTTTTTGAGAATATCAATAACAACTTTGCTGAT 101966
|| ||||||||||| || ||||| |||||| ||| || | | | |||||| ||||
Sbjct 31257 GCCTTCTTTGCTGGTTCAGATGGCATTGTTAATGAAAACTTGGTTCAAAACTTTTGTGAT 31198
Query 101967 GAGGTGCA-ATCCTCTGAAGCGAGATCTTTCTATGCGTATCAATGTCATAAT-GAAATGG 102024
|| || | || | ||||||| | || |||||||| | |||| |||| || ||||
Sbjct 31197 GAAGTCAAGATTC-CTGAAGCTAAATGTTTCTATGGCTTTCAAA-TCATGATTGAAAATA 31140
Query 102025 TGCATGGGGAGACATACAGTAAACTCATAGACAAGTATATTAAGGATGGTGCTGAGAAGA 102084
| || | || || |||||| | || |||| ||||| || ||| |||||
Sbjct 31139 TTCACGCAGAAACTTACAGTCTTTTGATTGACACTTATATCAAAGATAACCAAGAGAAAG 31080
Query 102085 AGCAGCTCTTTGAAGCCATCCAAACAGTTCCATGTATTCAAAAGAAAG-CGGATTGGGCT 102143
| ||||||| || || | || | || ||||| |||||||||| | ||||||||
Sbjct 31079 AAATGCTCTTTTCTGCTATTGACACTATCCCTTGTAT-CAAAAGAAAGGCTGATTGGGCC 31021
Query 102144 ATGAAGTGGTTTGATACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGT 102203
| |||||| || | || || |||| ||||||||||| || | || ||||| |
Sbjct 31020 TTCAAGTGGATTTCCTCTAA--CG-GTTCTTTTGCTGAGCGTCTTGTTGCCTTTGCTGCT 30964
Query 102204 GTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGG 102262
|| || ||||| ||||||||||||||||| ||| | |||| |||||||||||| || ||
Sbjct 30963 GTCGAAGGTATTTTCTTCTCTGGTTCCTT-TGCTTCCATTTTTTGGCTCAAGAAACGTGG 30905
Query 102263 TCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCA 102319
| | ||||| ||| | ||| ||| || | |||| |||||| || || || ||
Sbjct 30904 TTTGATGCCTGGTTTGACATTCAGCAATGAATTGATCTGTCGTGATGAAGGCCTTCA 30848
>seq578
Length=440600
Score = 132 bits (146), Expect = 6e-26
Identities = 413/627 (66%), Gaps = 18/627 (3%)
Strand=Plus/Plus
Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671
|| ||| ||||| | ||||| || ||| |||| ||||| || || || | || |||
Sbjct 115397 CCTCAGCACATGATTATGCGTGTTGCGGTCGGAATCCACGGTGATGACCTCGAGAAGGTT 115456
Query 111672 TTGGAGACATACGACAAGATGTCCCGTGGTATG-TTCATCCACGCAACACCAACCCTCTT 111730
| ||||| ||| | |||||||| | || |||| ||||| | || || || ||
Sbjct 115457 ATCGAGACCTACAATCTGATGTCCCA-GAAATACTTCACTCACGCCTCGCCGACTCTGTT 115515
Query 111731 CAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGA 111790
|||||| ||||| || || || || || || |||||||| | | ||||||||
Sbjct 115516 CAACGCCGGTACTCCTCAGCCGCAGCTGGCCTCCTGCTTCCTTATCGATATGAAGGAGGA 115575
Query 111791 TTCAATCAATGGCATTTACGGCACTCTCACTGAA----TGTGCCCAAATCTCAAAGTGGG 111846
|| | || || || | ||| || |||| |||||| ||||| ||| |
Sbjct 115576 CAGCATTGAGGGTATCTATGACAC-CT---TGAAGACTTGTGCCATGATCTCCAAGACTG 115631
Query 111847 CTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGT-CTCGTATTAGAGGT 111905
| |||||||| || | || |||| | || | || | || || || || | |||
Sbjct 115632 CGGGTGGTATTGGTCTCAACGTCCACCGTATCCGTGCTA-CAGGTTCTTACATCGGTGGT 115690
Query 111906 ACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGC 111965
|| || || || | || || | || |||||||| || || ||| ||| || |
Sbjct 115691 ACTAACGGAACTTCCAACGGGCTTGTCCCTATGCTTCGAGTGTTCAACAACACTGCAAGA 115750
Query 111966 TATGTAAACCAAGCTGGGCGT---CGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGG 112022
|| || |||| | ||| ||| || || |||| |||| || ||||| |||
Sbjct 115751 TACGTTGACCAGGGCGGGAACAAGCGCCCTGGTGCTTTCGCTATCTACCTGGAGCCCTGG 115810
Query 112023 CACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGG 112082
||| | || ||| | |||||| | || | || ||||| ||| | || |||| | |
Sbjct 115811 CACTCCGACATCTTTGAGTTCTTGGACCTTCGCAAGAACCACGGTAAGGAAGAGGT-CAG 115869
Query 112083 TGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGA 112141
|| || || ||||||| || ||||||| ||| ||||||||||||||| | ||||||
Sbjct 115870 AGCACGTGACCTCTTCTATGCCCTCTGGACTCCCGATCTCTTCATGAAGCGTGTTGAGTC 115929
Query 112142 GAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGG 112201
| || | ||| | || || || ||| | |||| |||||||| || |||| | ||
Sbjct 115930 TAACGGTGACTGGACCCTATTCTGCCCAAATGAGGCTCCCGGTCTTTCTGATGTCTATGG 115989
Query 112202 TGAGGAGTTTGAAGCCCTCTA-CACAA 112227
|| |||||||| || || || |||||
Sbjct 115990 CGATGAGTTTGAGGCTCTGTACCACAA 116016
>seq657
Length=446211
Score = 123 bits (136), Expect = 3e-23
Identities = 98/118 (83%), Gaps = 0/118 (0%)
Strand=Plus/Minus
Query 102203 TGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGG 102262
|||||||||||||||||||||||| || ||| | |||| | ||||| |||||||| ||
Sbjct 212203 TGTTGAGGGTATCTTCTTCTCTGGCTCTTTCGCCTCTATCTTCTGGCTGAAGAAGCGTGG 212144
Query 102263 TCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 102320
|||||||| ||||| |||||| |||||||| ||||||||||| ||||| || |||
Sbjct 212143 CCTCATGCCTGGTCTGACCTTCTCTAACGAGCTGATCTCTCGTGATGAGGGTCTGCAC 212086
>seq347
Length=15602
Score = 113 bits (124), Expect = 6e-20
Identities = 203/294 (69%), Gaps = 2/294 (1%)
Strand=Plus/Minus
Query 176723 TTGAGAATGAGACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAGA 176782
|||| || ||||||||||| || ||||| || | ||| ||| ||||||||||| | |
Sbjct 5257 TTGATGATCAGACCCTTGATATGTGAACCATCATGATCTTGATCTGTCATGATCATCAAA 5198
Query 176783 CGACCATACCGAAGCTCGGAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAGATC 176842
|||||||| || | ||| |||| || ||| | ||||| || |||||||| | ||
Sbjct 5197 CGACCATATCGTAACTCATCAACACTTTCATACTTTTTACCATGCTGAAGACCAAGAATA 5138
Query 176843 TTCTTGAGATCGTTGAACTCTTGGTTTGATGTGAGCTGTGTGACAGAGGCATCACGAACA 176902
||||| | |||| |||| || |||| | | ||| ||||||||||
Sbjct 5137 GCCTTGATGTTTTTGATTTCTTCATTCTTCATGAGTTCAGCATTAGAAACATCACGAACG 5078
Query 176903 TTCTTACACTTCCCACGAAGAGGGAAGACACCGTAGTGATCGCGACCAACCACAGAGAGA 176962
||| || ||||||| ||||| ||||| |||| || |||||||| || || | |
Sbjct 5077 TTCAATAGTTTACCACGAATGGGGAAAACACCATAGTAGTCACGACCAACTACTGACATA 5018
Query 176963 CC-CGCAACCGCGAGCGTTTTCGCAGAATCACCCTCTGTCACGATGAGTGTACA 177015
|| | ||| | |||| || || |||||||| ||||| | || || |||||
Sbjct 5017 CCACTCAA-GACAAGCGACTTGGCTGAATCACCTTCTGTGATTATCAGAGTACA 4965
>seq268
Length=14648
Score = 113 bits (124), Expect = 6e-20
Identities = 203/294 (69%), Gaps = 2/294 (1%)
Strand=Plus/Minus
Query 176723 TTGAGAATGAGACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAGA 176782
|||| || ||||||||||| || ||||| || | ||| ||| ||||||||||| | |
Sbjct 5299 TTGATGATCAGACCCTTGATATGTGAACCATCATGATCTTGATCTGTCATGATCATCAAA 5240
Query 176783 CGACCATACCGAAGCTCGGAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAGATC 176842
|||||||| || | ||| |||| || ||| | ||||| || |||||||| | ||
Sbjct 5239 CGACCATATCGTAACTCATCAACACTTTCATACTTTTTACCATGCTGAAGACCAAGAATA 5180
Query 176843 TTCTTGAGATCGTTGAACTCTTGGTTTGATGTGAGCTGTGTGACAGAGGCATCACGAACA 176902
||||| | |||| |||| || |||| | | ||| ||||||||||
Sbjct 5179 GCCTTGATGTTTTTGATTTCTTCATTCTTCATGAGTTCAGCATTAGAAACATCACGAACG 5120
Query 176903 TTCTTACACTTCCCACGAAGAGGGAAGACACCGTAGTGATCGCGACCAACCACAGAGAGA 176962
||| || ||||||| ||||| ||||| |||| || |||||||| || || | |
Sbjct 5119 TTCAATAGTTTACCACGAATGGGGAAAACACCATAGTAGTCACGACCAACTACTGACATA 5060
Query 176963 CC-CGCAACCGCGAGCGTTTTCGCAGAATCACCCTCTGTCACGATGAGTGTACA 177015
|| | ||| | |||| || || |||||||| ||||| | || || |||||
Sbjct 5059 CCACTCAA-GACAAGCGACTTGGCTGAATCACCTTCTGTGATTATCAGAGTACA 5007
>seq723
Length=18298
Score = 109 bits (120), Expect = 7e-19
Identities = 285/426 (67%), Gaps = 9/426 (2%)
Strand=Plus/Minus
Query 111711 CACGCAACACCAACCCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTC 111770
|| || ||||| || | ||||||||||||||||| | ||| ||| |||| ||||| |||
Sbjct 6259 CATGCTACACCTACATTGTTCAACGCTGGTACACCTAAACCTCAATTGTCTAGTTGCTTC 6200
Query 111771 CTTATTGCAAACAAGGAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCC 111830
||| || || || ||||| ||| | ||||| |||| ||| |||| |||||
Sbjct 6199 CTTGTTCAAATGAAAGAGGACAGTATCGAAGGCATCTACGATACTATCACCACGTGTGCT 6140
Query 111831 CAAATCTCAAAGTGGGCTGGTGGTATCGG-GATGCACATC-CATGATGTCAGAGCCAACA 111888
| ||||| |||| ||||| ||| | || | ||| || | ||| || | | |
Sbjct 6139 CGTATCTCCAAGTCTGCTGGCGGTGTTGGCGTTGCTGCTCAAAAGAT-TC-GTGGCTCTG 6082
Query 111889 AGTCTCGTATTAGAGGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTAT 111948
||| ||| ||| ||||| ||| || |||| |||||||||||||| | || |
Sbjct 6081 GCTCTTATATCGCAGGAACAAACGGTACCTCCAATGGCATTATTCCAATGCTCAGAGTCT 6022
Query 111949 TTAACGCCACAGCGCGCTATGTAAACCAAGCTGGGCGT---CGCAA-GGGATCTATCGCA 112004
|||| | ||| || |||| ||| | |||| || || ||||| || | || | ||
Sbjct 6021 TTAATGACACTGCTCGCTTTGTGACACAAGGAGGTGGTAAACGCAACGGTAACT-TTGCT 5963
Query 112005 GTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAA 112064
|||||| | || || ||||| | || | | || ||| | || ||||| ||| |
Sbjct 5962 GTCTATATAGAACCTTGGCATGTCGACGTATTCGAATTCTTGGACTTGCGCAAGAACAAT 5903
Query 112065 GGTGATGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTC 112124
|||| |||||| ||| ||||| | |||| | | ||| | || ||||| |||
Sbjct 5902 GGTGCTGAGGAAATGCGCGCACGCGACTTGTTCTTGGGATTATGGGTGCCTGATCTTTTC 5843
Query 112125 ATGAAG 112130
||| ||
Sbjct 5842 ATGGAG 5837
Score = 98.7 bits (108), Expect = 1e-15
Identities = 129/179 (72%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 112434 GCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACA 112493
||||| ||||| | || || ||||| | ||||||| ||| || ||| |||||||||
Sbjct 5378 GCTGTCTGTAATTTGGCTTCTCTCGCTTTACCCAAGTTTGTCAATAGAGAAACAAAGACA 5319
Query 112494 TTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTT 112553
||||||| |||||| || || ||||||| ||| || ||| || || |||| ||
Sbjct 5318 TTTGATTTTGAAAAGCTTCATCAAGTTACCAAAGTAGTGACACGCAATCTGAACAAGGTC 5259
Query 112554 ATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCC 112612
|||||| || | ||| || ||||| || ||||| |||||| ||||||||||
Sbjct 5258 ATTGATGTCAACTATTATCCAGTTGAAGAGGCACGTAACAGCAATATGCGACACCGTCC 5200
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620735858926960
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