Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017 -02-15] 843 sequences; 47,573,060 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq744 149 8e-31 seq578 132 6e-26 seq657 123 3e-23 seq347 113 6e-20 seq268 113 6e-20 seq723 109 7e-19 >seq744 Length=38458 Score = 149 bits (164), Expect = 8e-31 Identities = 291/417 (70%), Gaps = 11/417 (3%) Strand=Plus/Minus Query 101907 GCATTCTTTGCTGGGTCCGATGGAATTGTTTTTGAGAATATCAATAACAACTTTGCTGAT 101966 || ||||||||||| || ||||| |||||| ||| || | | | |||||| |||| Sbjct 31257 GCCTTCTTTGCTGGTTCAGATGGCATTGTTAATGAAAACTTGGTTCAAAACTTTTGTGAT 31198 Query 101967 GAGGTGCA-ATCCTCTGAAGCGAGATCTTTCTATGCGTATCAATGTCATAAT-GAAATGG 102024 || || | || | ||||||| | || |||||||| | |||| |||| || |||| Sbjct 31197 GAAGTCAAGATTC-CTGAAGCTAAATGTTTCTATGGCTTTCAAA-TCATGATTGAAAATA 31140 Query 102025 TGCATGGGGAGACATACAGTAAACTCATAGACAAGTATATTAAGGATGGTGCTGAGAAGA 102084 | || | || || |||||| | || |||| ||||| || ||| ||||| Sbjct 31139 TTCACGCAGAAACTTACAGTCTTTTGATTGACACTTATATCAAAGATAACCAAGAGAAAG 31080 Query 102085 AGCAGCTCTTTGAAGCCATCCAAACAGTTCCATGTATTCAAAAGAAAG-CGGATTGGGCT 102143 | ||||||| || || | || | || ||||| |||||||||| | |||||||| Sbjct 31079 AAATGCTCTTTTCTGCTATTGACACTATCCCTTGTAT-CAAAAGAAAGGCTGATTGGGCC 31021 Query 102144 ATGAAGTGGTTTGATACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGT 102203 | |||||| || | || || |||| ||||||||||| || | || ||||| | Sbjct 31020 TTCAAGTGGATTTCCTCTAA--CG-GTTCTTTTGCTGAGCGTCTTGTTGCCTTTGCTGCT 30964 Query 102204 GTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGG 102262 || || ||||| ||||||||||||||||| ||| | |||| |||||||||||| || || Sbjct 30963 GTCGAAGGTATTTTCTTCTCTGGTTCCTT-TGCTTCCATTTTTTGGCTCAAGAAACGTGG 30905 Query 102263 TCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCA 102319 | | ||||| ||| | ||| ||| || | |||| |||||| || || || || Sbjct 30904 TTTGATGCCTGGTTTGACATTCAGCAATGAATTGATCTGTCGTGATGAAGGCCTTCA 30848 >seq578 Length=440600 Score = 132 bits (146), Expect = 6e-26 Identities = 413/627 (66%), Gaps = 18/627 (3%) Strand=Plus/Plus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 || ||| ||||| | ||||| || ||| |||| ||||| || || || | || ||| Sbjct 115397 CCTCAGCACATGATTATGCGTGTTGCGGTCGGAATCCACGGTGATGACCTCGAGAAGGTT 115456 Query 111672 TTGGAGACATACGACAAGATGTCCCGTGGTATG-TTCATCCACGCAACACCAACCCTCTT 111730 | ||||| ||| | |||||||| | || |||| ||||| | || || || || Sbjct 115457 ATCGAGACCTACAATCTGATGTCCCA-GAAATACTTCACTCACGCCTCGCCGACTCTGTT 115515 Query 111731 CAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGA 111790 |||||| ||||| || || || || || || |||||||| | | |||||||| Sbjct 115516 CAACGCCGGTACTCCTCAGCCGCAGCTGGCCTCCTGCTTCCTTATCGATATGAAGGAGGA 115575 Query 111791 TTCAATCAATGGCATTTACGGCACTCTCACTGAA----TGTGCCCAAATCTCAAAGTGGG 111846 || | || || || | ||| || |||| |||||| ||||| ||| | Sbjct 115576 CAGCATTGAGGGTATCTATGACAC-CT---TGAAGACTTGTGCCATGATCTCCAAGACTG 115631 Query 111847 CTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGT-CTCGTATTAGAGGT 111905 | |||||||| || | || |||| | || | || | || || || || | ||| Sbjct 115632 CGGGTGGTATTGGTCTCAACGTCCACCGTATCCGTGCTA-CAGGTTCTTACATCGGTGGT 115690 Query 111906 ACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGC 111965 || || || || | || || | || |||||||| || || ||| ||| || | Sbjct 115691 ACTAACGGAACTTCCAACGGGCTTGTCCCTATGCTTCGAGTGTTCAACAACACTGCAAGA 115750 Query 111966 TATGTAAACCAAGCTGGGCGT---CGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGG 112022 || || |||| | ||| ||| || || |||| |||| || ||||| ||| Sbjct 115751 TACGTTGACCAGGGCGGGAACAAGCGCCCTGGTGCTTTCGCTATCTACCTGGAGCCCTGG 115810 Query 112023 CACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGG 112082 ||| | || ||| | |||||| | || | || ||||| ||| | || |||| | | Sbjct 115811 CACTCCGACATCTTTGAGTTCTTGGACCTTCGCAAGAACCACGGTAAGGAAGAGGT-CAG 115869 Query 112083 TGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGA 112141 || || || ||||||| || ||||||| ||| ||||||||||||||| | |||||| Sbjct 115870 AGCACGTGACCTCTTCTATGCCCTCTGGACTCCCGATCTCTTCATGAAGCGTGTTGAGTC 115929 Query 112142 GAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGG 112201 | || | ||| | || || || ||| | |||| |||||||| || |||| | || Sbjct 115930 TAACGGTGACTGGACCCTATTCTGCCCAAATGAGGCTCCCGGTCTTTCTGATGTCTATGG 115989 Query 112202 TGAGGAGTTTGAAGCCCTCTA-CACAA 112227 || |||||||| || || || ||||| Sbjct 115990 CGATGAGTTTGAGGCTCTGTACCACAA 116016 >seq657 Length=446211 Score = 123 bits (136), Expect = 3e-23 Identities = 98/118 (83%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 102203 TGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGG 102262 |||||||||||||||||||||||| || ||| | |||| | ||||| |||||||| || Sbjct 212203 TGTTGAGGGTATCTTCTTCTCTGGCTCTTTCGCCTCTATCTTCTGGCTGAAGAAGCGTGG 212144 Query 102263 TCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 102320 |||||||| ||||| |||||| |||||||| ||||||||||| ||||| || ||| Sbjct 212143 CCTCATGCCTGGTCTGACCTTCTCTAACGAGCTGATCTCTCGTGATGAGGGTCTGCAC 212086 >seq347 Length=15602 Score = 113 bits (124), Expect = 6e-20 Identities = 203/294 (69%), Gaps = 2/294 (1%) Strand=Plus/Minus Query 176723 TTGAGAATGAGACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAGA 176782 |||| || ||||||||||| || ||||| || | ||| ||| ||||||||||| | | Sbjct 5257 TTGATGATCAGACCCTTGATATGTGAACCATCATGATCTTGATCTGTCATGATCATCAAA 5198 Query 176783 CGACCATACCGAAGCTCGGAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAGATC 176842 |||||||| || | ||| |||| || ||| | ||||| || |||||||| | || Sbjct 5197 CGACCATATCGTAACTCATCAACACTTTCATACTTTTTACCATGCTGAAGACCAAGAATA 5138 Query 176843 TTCTTGAGATCGTTGAACTCTTGGTTTGATGTGAGCTGTGTGACAGAGGCATCACGAACA 176902 ||||| | |||| |||| || |||| | | ||| |||||||||| Sbjct 5137 GCCTTGATGTTTTTGATTTCTTCATTCTTCATGAGTTCAGCATTAGAAACATCACGAACG 5078 Query 176903 TTCTTACACTTCCCACGAAGAGGGAAGACACCGTAGTGATCGCGACCAACCACAGAGAGA 176962 ||| || ||||||| ||||| ||||| |||| || |||||||| || || | | Sbjct 5077 TTCAATAGTTTACCACGAATGGGGAAAACACCATAGTAGTCACGACCAACTACTGACATA 5018 Query 176963 CC-CGCAACCGCGAGCGTTTTCGCAGAATCACCCTCTGTCACGATGAGTGTACA 177015 || | ||| | |||| || || |||||||| ||||| | || || ||||| Sbjct 5017 CCACTCAA-GACAAGCGACTTGGCTGAATCACCTTCTGTGATTATCAGAGTACA 4965 >seq268 Length=14648 Score = 113 bits (124), Expect = 6e-20 Identities = 203/294 (69%), Gaps = 2/294 (1%) Strand=Plus/Minus Query 176723 TTGAGAATGAGACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAGA 176782 |||| || ||||||||||| || ||||| || | ||| ||| ||||||||||| | | Sbjct 5299 TTGATGATCAGACCCTTGATATGTGAACCATCATGATCTTGATCTGTCATGATCATCAAA 5240 Query 176783 CGACCATACCGAAGCTCGGAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAGATC 176842 |||||||| || | ||| |||| || ||| | ||||| || |||||||| | || Sbjct 5239 CGACCATATCGTAACTCATCAACACTTTCATACTTTTTACCATGCTGAAGACCAAGAATA 5180 Query 176843 TTCTTGAGATCGTTGAACTCTTGGTTTGATGTGAGCTGTGTGACAGAGGCATCACGAACA 176902 ||||| | |||| |||| || |||| | | ||| |||||||||| Sbjct 5179 GCCTTGATGTTTTTGATTTCTTCATTCTTCATGAGTTCAGCATTAGAAACATCACGAACG 5120 Query 176903 TTCTTACACTTCCCACGAAGAGGGAAGACACCGTAGTGATCGCGACCAACCACAGAGAGA 176962 ||| || ||||||| ||||| ||||| |||| || |||||||| || || | | Sbjct 5119 TTCAATAGTTTACCACGAATGGGGAAAACACCATAGTAGTCACGACCAACTACTGACATA 5060 Query 176963 CC-CGCAACCGCGAGCGTTTTCGCAGAATCACCCTCTGTCACGATGAGTGTACA 177015 || | ||| | |||| || || |||||||| ||||| | || || ||||| Sbjct 5059 CCACTCAA-GACAAGCGACTTGGCTGAATCACCTTCTGTGATTATCAGAGTACA 5007 >seq723 Length=18298 Score = 109 bits (120), Expect = 7e-19 Identities = 285/426 (67%), Gaps = 9/426 (2%) Strand=Plus/Minus Query 111711 CACGCAACACCAACCCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTC 111770 || || ||||| || | ||||||||||||||||| | ||| ||| |||| ||||| ||| Sbjct 6259 CATGCTACACCTACATTGTTCAACGCTGGTACACCTAAACCTCAATTGTCTAGTTGCTTC 6200 Query 111771 CTTATTGCAAACAAGGAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCC 111830 ||| || || || ||||| ||| | ||||| |||| ||| |||| ||||| Sbjct 6199 CTTGTTCAAATGAAAGAGGACAGTATCGAAGGCATCTACGATACTATCACCACGTGTGCT 6140 Query 111831 CAAATCTCAAAGTGGGCTGGTGGTATCGG-GATGCACATC-CATGATGTCAGAGCCAACA 111888 | ||||| |||| ||||| ||| | || | ||| || | ||| || | | | Sbjct 6139 CGTATCTCCAAGTCTGCTGGCGGTGTTGGCGTTGCTGCTCAAAAGAT-TC-GTGGCTCTG 6082 Query 111889 AGTCTCGTATTAGAGGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTAT 111948 ||| ||| ||| ||||| ||| || |||| |||||||||||||| | || | Sbjct 6081 GCTCTTATATCGCAGGAACAAACGGTACCTCCAATGGCATTATTCCAATGCTCAGAGTCT 6022 Query 111949 TTAACGCCACAGCGCGCTATGTAAACCAAGCTGGGCGT---CGCAA-GGGATCTATCGCA 112004 |||| | ||| || |||| ||| | |||| || || ||||| || | || | || Sbjct 6021 TTAATGACACTGCTCGCTTTGTGACACAAGGAGGTGGTAAACGCAACGGTAACT-TTGCT 5963 Query 112005 GTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAA 112064 |||||| | || || ||||| | || | | || ||| | || ||||| ||| | Sbjct 5962 GTCTATATAGAACCTTGGCATGTCGACGTATTCGAATTCTTGGACTTGCGCAAGAACAAT 5903 Query 112065 GGTGATGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTC 112124 |||| |||||| ||| ||||| | |||| | | ||| | || ||||| ||| Sbjct 5902 GGTGCTGAGGAAATGCGCGCACGCGACTTGTTCTTGGGATTATGGGTGCCTGATCTTTTC 5843 Query 112125 ATGAAG 112130 ||| || Sbjct 5842 ATGGAG 5837 Score = 98.7 bits (108), Expect = 1e-15 Identities = 129/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 112434 GCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACA 112493 ||||| ||||| | || || ||||| | ||||||| ||| || ||| ||||||||| Sbjct 5378 GCTGTCTGTAATTTGGCTTCTCTCGCTTTACCCAAGTTTGTCAATAGAGAAACAAAGACA 5319 Query 112494 TTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTT 112553 ||||||| |||||| || || ||||||| ||| || ||| || || |||| || Sbjct 5318 TTTGATTTTGAAAAGCTTCATCAAGTTACCAAAGTAGTGACACGCAATCTGAACAAGGTC 5259 Query 112554 ATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCC 112612 |||||| || | ||| || ||||| || ||||| |||||| |||||||||| Sbjct 5258 ATTGATGTCAACTATTATCCAGTTGAAGAGGCACGTAACAGCAATATGCGACACCGTCC 5200 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620735858926960