Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017 -02-15] 843 sequences; 47,573,060 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq496 147 3e-30 seq578 134 2e-26 seq840 116 4e-21 seq744 109 6e-19 seq225 95.1 1e-14 seq512 91.5 2e-13 seq793 87.8 2e-12 seq805 86.0 7e-12 seq242 86.0 7e-12 >seq496 Length=193795 Score = 147 bits (162), Expect = 3e-30 Identities = 287/424 (68%), Gaps = 35/424 (8%) Strand=Plus/Minus Query 11588 TGTCGAAACCGTCCATTTCTGTGAGAAGCTGGTTGATCGTCTGTTCACGCTCATCGTTGG 11647 ||| |||||||||||||||||| || | ||| || | || |||||||| ||||| Sbjct 136159 TGTTGAAACCGTCCATTTCTGTAAGGATCTGATTCAGGGTACTCTCACGCTCGTCGTT-- 136102 Query 11648 AGGGCATACCACCTGCCGAAC----GCTTC---------TTACCGACAGCGTCAATCTCA 11694 ||| || |||||| |||| ||||||| |||||| |||||| Sbjct 136101 -------ACCGCC-GCCGAAGCTTTGCTTGGCTCTAGATTTACCGATAGCGTCGATCTCA 136050 Query 11695 TCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGTTCGAAAAGTTCACGTACACGC 11754 || ||||| | |||||| || ||| | ||| | | |||| || ||||| |||||| Sbjct 136049 TCAATGAAGATGATACAGGGAGTGTTTTTCCTTGCGTTTGCGAACAGATCACGGACACGC 135990 Query 11755 TTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGGCAGAA-CACTGA-----ATG 11808 | |||||||| ||||||||||| ||||| | ||||| |||||| | | Sbjct 135989 GAGGGACCAACACCGACGAACATCTCGACGAACT------CAGAACCACTGACGCTGAAG 135936 Query 11809 AAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCTTACCCGTACCAGGT 11868 || |||||| ||||| || || | || || || | |||||||| |||||||| Sbjct 135935 AAAGGAACACCGGACTCTCCGGCAGTTGCCTTTGCTAGCAAGGTCTTACCAGTACCAGGG 135876 Query 11869 GCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACCACTTCCAAAGTAGCGCTCAGGC 11928 | ||| | || | || ||||| |||||||| |||||| | | | ||||||||| Sbjct 135875 GGACCTGACAGGATAGCACCACGCGGGATCTTCGCACCAAGTTTCTGGAATCGCTCAGGC 135816 Query 11929 TTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGCGGAGTCGATACCCTCAACA 11988 | ||||||||| || | |||| | ||| ||||||| ||| |||||| | ||| Sbjct 135815 TGTTTGAGGAAGCTAACGAACTCCATGATTTCAACCTTGGCCTCGTCCATACCCGCCACA 135756 Query 11989 TCGG 11992 |||| Sbjct 135755 TCGG 135752 >seq578 Length=440600 Score = 134 bits (148), Expect = 2e-26 Identities = 379/571 (66%), Gaps = 21/571 (4%) Strand=Plus/Minus Query 110515 TACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTG 110574 |||||| ||||| ||||||| || | || || |||||||||||||| |||| Sbjct 116019 TACTTGTGGTACAGAGCCTCAAACTCATCGCCATAGACATCAGAAAGACCGGGAGCCTCA 115960 Query 110575 TCGGGACAGAAGAGGGACCAATTTCCACCCT---CCTCAACCCTCTTCATGAACAGGTCA 110631 | || ||||| |||| ||| | |||| | |||||| | ||||||||| || || Sbjct 115959 TTTGGGCAGAATAGGGTCCAGT---CACCGTTAGACTCAACACGCTTCATGAAGAGATCG 115903 Query 110632 GGAATCCACATCGCCGAGAAAAGGTCACG-GCAACGAGCCTCTTCATCACCTTGGTTGAG 110690 ||| |||| | || |||| |||||||| || || ||||||| | ||| ||||| Sbjct 115902 GGAGTCCAGAGGGCATAGAAGAGGTCACGTGCTCTGA-CCTCTTCCTTACCGTGGTTCTT 115844 Query 110691 GCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGA 110750 ||| || ||||| || || | ||| || |||||||| || || || |||| ||||| | Sbjct 115843 GCGAAGGTCCAAGAACTCAAAGATGTCGGAGTGCCAGGGCTCCAGGTAGATAGCGAAAGC 115784 Query 110751 TCCCTTACGACG-----ACCCG-CCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCT 110804 || | | || |||| |||||| ||| || | ||| ||| ||||| || | Sbjct 115783 ACC---AGGGCGCTTGTTCCCGCCCTGGTCAACGTATCTTGCAGTGTTGTTGAACACTCG 115727 Query 110805 GAGCATAGGAATAATTCCATCGGATTGACCATTTGTACC-CCTAATTCTGGACTTATTGG 110863 |||||||| | || || | ||| || || ||||| || | | | || | | | Sbjct 115726 AAGCATAGGGACAAGCCCGTTGGAAGTTCCGTTAGTACCACCGATGTAAGAACCT-GTAG 115668 Query 110864 CACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCAC-AC 110922 |||| || ||||| | | ||||||||||||||| ||| || |||| | Sbjct 115667 CACGGATACGGTGGACGTTGAGACCAATACCACCCGCAGTCTTGGAGATCATGGCACAAG 115608 Query 110923 TCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAA 110982 ||| | | || |||| ||||| ||||| || |||| | | || || ||||| Sbjct 115607 TCT-TCAAGGTGTCATAGATACCCTCAATGCTGTCCTCCTTCATATCGATAAGGAAGCAG 115549 Query 110983 GAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAAC 111042 || | || ||| || |||| || || || ||||| || || || | || ||| |||| Sbjct 115548 GAGGCCAGCTGCGGCTGAGGAGTACCGGCGTTGAACAGAGTCGGCGAGGCGTGAGTGAAG 115489 Query 111043 AGACCTTGGGACATCTTGTTGTATGTGTCGA 111073 ||||||||| ||||| || |||| Sbjct 115488 TATTTCTGGGACATCAGATTGTAGGTCTCGA 115458 >seq840 Length=915896 Score = 116 bits (128), Expect = 4e-21 Identities = 213/311 (68%), Gaps = 6/311 (2%) Strand=Plus/Minus Query 11692 TCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGTTCGAAAAGTTCACGTACA 11751 || |||||||| | |||| |||| |||| ||| ||||| |||| || ||||| ||| Sbjct 437355 TCGTCGATGAAGATGATAGCCGGTGCCTTGGAACGAGCCTGGGCGAAGAGGTCACGGACA 437296 Query 11752 CGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGGCAGAACACTGAATGAAG 11811 ||||| ||||||||||| || | | ||| |||| | | |||| | | |||| Sbjct 437295 CGCTTAGCTCCAACACCCACATAGACTTCATCGAATTCGGATCCAGACATGTAGAAGAAG 437236 Query 11812 GGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCTTACCCGTACCAGGTGCA 11871 || ||| || ||| ||||||| || ||||| || || ||||| || ||||| || | Sbjct 437235 GGCACACCAGCCTCTCCAGCGACAGCACGAGCCAGCAGGGTCTTTCCGGTACCCGGAGGT 437176 Query 11872 CCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACC---ACTTCCAAAGTAGCGCTCAGGC 11928 ||| | ||||| | || ||||| |||| |||| | || || | ||||| || Sbjct 437175 CCAACCAGAAGTACACCCTTGGGGAGCTTGCCACCGAGAGTT---GAGAATCGCTCCGGG 437119 Query 11929 TTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGCGGAGTCGATACCCTCAACA 11988 ||| || || || || | ||| | ||||| |||||||| |||| || | || Sbjct 437118 TTCAGAAGAAACTCGACCAGCTCTTGCAGTTCATCCTTGGCCTCGTCGCATCCGTGCACG 437059 Query 11989 TCGGTGAAACG 11999 ||| ||||||| Sbjct 437058 TCGCTGAAACG 437048 Score = 86.0 bits (94), Expect = 7e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 ||||||||| ||||||||||||||||| |||||||||||||| || |||||| || ||| Sbjct 430390 TAGCTCAGTCGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGTC 430449 Query 136777 GGGAACA 136783 |||| || Sbjct 430450 GGGACCA 430456 >seq744 Length=38458 Score = 109 bits (120), Expect = 6e-19 Identities = 294/436 (67%), Gaps = 18/436 (4%) Strand=Plus/Plus Query 119496 GCAAATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAG--CAAAGTC 119553 ||||| || |||||| |||||||| ||| |||| | ||||| ||||| |||| | Sbjct 30836 GCAAAGTCAGTATGAAGGCCTTCATCACGACAGATCAATTCATTGCTGAATGTCAAA--C 30893 Query 119554 CAGGCATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGA 119613 ||||||| | || | |||||| |||||||| |||| | ||| ||||| ||||| | Sbjct 30894 CAGGCATCAAACCACGTTTCTTGAGCCAAAAAATGGAAGCAAAGGAACCAGAGAAGAAAA 30953 Query 119614 TGCCCTCCACACAGGCGAAAGCGAATAGACGCTCAGCAAAAGGTCGAGACTTGTCGAA-- 119671 | || || ||| || || || | |||||||||||||||| | | | ||| Sbjct 30954 TACCTTCGACAGCAGCAAAGGCAACAAGACGCTCAGCAAAAGAAC--CGTTAGAGGAAAT 31011 Query 119672 CCACTTGAGAGCCCAGTTGGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGAA 119731 |||||||| ||||| | ||||| | | || || |||| ||| | || || ||| Sbjct 31012 CCACTTGAAGGCCCAATCAGCCTTTCTTTTGATACAAGGGATAGTGTCAATAGC--AGAA 31069 Query 119732 AAGTTGC--TTCTTT-TCAGCACCATCCTTAATATATTTATCAATGAGTTTAGAGTAGGT 119788 ||| || |||||| || ||| || ||||| | ||||| | | ||| || Sbjct 31070 AAG-AGCATTTCTTTCTCTTGGTTATCTTTGATATAAGTGTCAATCAAAAGACTGTAAGT 31128 Query 119789 CTCACCATGAACCATTTCATTGTGTGA-CTGATAGGCATAAAATGAGCGAGCTTCGGAAA 119847 || | |||| ||||| | ||| ||| || |||| || | |||||| | || Sbjct 31129 TTCTGCGTGAATATTTTCAAT-CATGATTTGAAAGCCATAGAAACATTTAGCTTCAGGAA 31187 Query 119848 TTTGCACTTCGTCAGCAAAATTGTTG-TTGATATTTTCAAAAACAATTCCATCGGATCCA 119906 | | ||||| ||| ||||| | ||| | |||||| |||||| ||||| || ||| Sbjct 31188 TCTTGACTTCATCA-CAAAAGTTTTGAACCAAGTTTTCATTAACAATGCCATCTGAACCA 31246 Query 119907 GCGAAGAATGCTAAGA 119922 || ||||| ||||||| Sbjct 31247 GCAAAGAAGGCTAAGA 31262 Score = 86.0 bits (94), Expect = 7e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 ||||||||||||||||||||||||||| |||||||||||||| || |||||| || ||| Sbjct 23443 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGTA 23384 Query 136777 GGGAACA 136783 | || || Sbjct 23383 GTGACCA 23377 >seq225 Length=18423 Score = 95.1 bits (104), Expect = 1e-14 Identities = 144/198 (73%), Gaps = 8/198 (4%) Strand=Plus/Minus Query 109420 ATACCCGTTTTGAGACCAGCCTTCCATGCGTACATATGCATTGAAGAGAGTTTG--GAAA 109477 ||||| || || | ||| ||||||||| || | |||||||| ||||| || | || Sbjct 1692 ATACCTGTCTTCAAACCCTTCTTCCATGCATAAAAGTGCATTGATGAGAGCCTGCTGTAA 1633 Query 109478 GTGTCGGACTCTCCATAAACAAG-TTCATCGACTGAGACTGATCGATGAATCGACCACGA 109536 || ||| || || ||| || || | |||||||| ||||||||||| || ||||| Sbjct 1632 TTG--GGA-TCAGCAGAAAACAGATTGAGAGACTGAGATTGATCGATGAAAGGAGCACGA 1576 Query 109537 TCAGCCGCCATGTCGATGAT-ACACTTTTGGCTAATTTCCCAGACAGTCTTGTACAAATT 109595 || |||||| ||||||||| |||| ||| |||||||| | |||||||| || || Sbjct 1575 TCGACCGCCAAGTCGATGATGACAC-GTTGAGAGATTTCCCAAGCTGTCTTGTATAACTT 1517 Query 109596 CTTGATATCATCGGGAAT 109613 ||| | || || ||||| Sbjct 1516 CTTCAAGTCTTCAGGAAT 1499 >seq512 Length=377165 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 ||||||||| ||||||||||||||||| |||||||||||||| || |||||| || ||| Sbjct 47536 TAGCTCAGTCGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGTC 47595 Query 136777 GGGAACAGCTTTT 136789 |||| || ||||| Sbjct 47596 GGGACCATCTTTT 47608 >seq793 Length=274900 Score = 87.8 bits (96), Expect = 2e-12 Identities = 60/68 (88%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 ||||||||| ||||||||||||||||| |||||||||||||| || |||||| || ||| Sbjct 273514 TAGCTCAGTCGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGTC 273573 Query 136777 GGGAACAG 136784 |||| ||| Sbjct 273574 GGGACCAG 273581 Score = 86.0 bits (94), Expect = 7e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 ||||||||| ||||||||||||||||| |||||||||||||| || |||||| || ||| Sbjct 270880 TAGCTCAGTCGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGTC 270821 Query 136777 GGGAACA 136783 |||| || Sbjct 270820 GGGACCA 270814 >seq805 Length=261333 Score = 86.0 bits (94), Expect = 7e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 ||||||||| ||||||||||||||||| |||||||||||||| || |||||| || ||| Sbjct 93877 TAGCTCAGTCGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGTC 93936 Query 136777 GGGAACA 136783 |||| || Sbjct 93937 GGGACCA 93943 Score = 86.0 bits (94), Expect = 7e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 ||||||||| ||||||||||||||||| |||||||||||||| || |||||| || ||| Sbjct 128282 TAGCTCAGTCGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGTC 128223 Query 136777 GGGAACA 136783 |||| || Sbjct 128222 GGGACCA 128216 >seq242 Length=21071 Score = 86.0 bits (94), Expect = 7e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 ||||||||||||||||||||||||||| |||||||||||||| || |||||| || ||| Sbjct 18247 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGTA 18306 Query 136777 GGGAACA 136783 | || || Sbjct 18307 GTGACCA 18313 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588969793665400