Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017
-02-15] 843 sequences; 47,573,060 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq578 134 2e-26
seq657 109 6e-19
seq347 107 2e-18
seq268 107 2e-18
>seq578
Length=440600
Score = 134 bits (148), Expect = 2e-26
Identities = 406/619 (66%), Gaps = 16/619 (3%)
Strand=Plus/Minus
Query 106695 TTGTG-TAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCT 106753
||||| || || || |||||||| || || | || || ||||| || |||| | |
Sbjct 116016 TTGTGGTACAGAGCCTCAAACTCATCGCCATAGACATCAGAAAGACCGGGAGCCTCATTT 115957
Query 106754 GGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATC 106813
|| ||||| || | ||| | ||| |||||| ||||||||||| || || ||| ||
Sbjct 115956 GGGCAGAATAGGGTCCAGTCACCGTTAGACTCAACACGCTTCATGAAGAGATCGGGAGTC 115897
Query 106814 CACAGGGATGAAAAGAGATCTC-TACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAA 106872
|| |||| | ||||| || | | | | || ||||||| | ||| ||||| || |
Sbjct 115896 CAGAGGGCATAGAAGAGGTCACGTGCTCTGA-CCTCTTCCTTACCGTGGTTCTTGCGAAG 115838
Query 106873 CTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC--- 106929
|| | |||||| | ||| || | |||||| ||||| || |||| |||| || ||
Sbjct 115837 GTCCAAGAACTCAAAGATGTCGGAGTGCCAGGGCTCCAGGTAGATAGCGAAAGCACCAGG 115778
Query 106930 ---CTT-TCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCA 106985
||| | ||||| || | || || | || ||| ||| || || |||||||
Sbjct 115777 GCGCTTGTTCCCGCCC----TGGTCAACGTATCTTGCAGTGTTGTTGAACACTCGAAGCA 115722
Query 106986 TTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCA 107045
| || | || || | || || || || || | || ||| | || | |
Sbjct 115721 TAGGGACAAGCCCGTTGGAAGTTCCGTTAGTACCACCGATGTAAGAACCTGTAGCACGGA 115662
Query 107046 CATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAA 107105
| |||| || | |||||||| || || ||| ||||| ||||| | | |
Sbjct 115661 TACGGTGGACGTTGAGACCAATACCACCCGCAGTCTTGGAGATCATGGCACAAGTCTTCA 115602
Query 107106 GAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACA 107165
|| |||||||||| | || ||||||||| | ||||||||||||| || ||
Sbjct 115601 AGGTGTCATAGATACCCTCAATGCTGTCCTCCTTCATATCGATAAGGAAGCAGGAGGCCA 115542
Query 107166 TCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAA-CATACCT 107224
|||||| || ||||| || ||||| || || || | |||||| |||| || |
Sbjct 115541 GCTGCGGCTGAGGAGTACCGGCGTTGAACAGAGTCGGCGAGGCGTGAGTGAAGTATTTC- 115483
Query 107225 TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATG 107284
||||||||| | ||| ||||| | || || | ||| || |||||||| ||||
Sbjct 115482 TGGGACATCAGATTGTAGGTCTCGATAACCTTCTCGAGGTCATCACCGTGGATTCCGACC 115423
Query 107285 GCCACACGCATAAACATGT 107303
|| |||||||||| |||||
Sbjct 115422 GCAACACGCATAATCATGT 115404
Score = 111 bits (122), Expect = 2e-19
Identities = 130/176 (74%), Gaps = 0/176 (0%)
Strand=Plus/Minus
Query 106469 GATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACAC 106528
|| ||||| |||||||| || |||||| | |||||||| | || || || ||
Sbjct 116296 GAGGCCAAGTTGCAAACGGCGACCTCATCGGGGGCAGTGTACTCGATGATCTCAGTGCAG 116237
Query 106529 AAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCC 106588
| ||| || || || || |||| ||||| ||||| ||||| |||||||||||||||
Sbjct 116236 AGGTTAGAGCTGCGGATAGTACCCAGGTTCTTCTGGTTGCTCTTCTTGTTGCACGCATCC 116177
Query 106589 TTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCA 106644
||||| |||||| |||| | || ||||| ||||| | || |||||| || | |||
Sbjct 116176 TTGTACAGCATGAAGGGGTTACCGGTCTCGGTCTGGGCCTCGAGAATGGCATACCA 116121
>seq657
Length=446211
Score = 109 bits (120), Expect = 6e-19
Identities = 294/448 (66%), Gaps = 4/448 (1%)
Strand=Plus/Plus
Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045
||||| || || |||||||| |||||||||||||| ||| | || ||||| |||||
Sbjct 211787 TAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCGAGCGAGATGTTGTCCATG 211846
Query 117046 AAGTCAAATGGATTCTTCGCGTTCCA--AATGGGTGGCACCCCAACTTGTTTGAGGAGAC 117103
||||| || || || | ||||| | | | || || || || || |
Sbjct 211847 AAGTCGAAGGGGTTTGTGGCGTTGTAGTACTTCTTGTTGCC--AAGAGAGACCAGCAGGC 211904
Query 117104 GATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGATTAC 117163
| || | || |||| ||||||| | |||| || ||||||||||| | ||| |
Sbjct 211905 GGTCGGCAACGAACTCGATGTACTGGCACATGAGCTTGGAGTTCATACCAAGGAGGGCAA 211964
Query 117164 ATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGGCGT 117223
||||| |||||| | |||| | | |||||| || || || || | ||| |
Sbjct 211965 CGGGGAGGGCGTCCGTCAGGAACTCCTGCTCAATGTCGACGGCATCAACGATGATCTTCT 212024
Query 117224 GGATAGTTTCGGTAGTGGGTCTATTACGCAAAGTCTTGAAGAGCTCCACGGCAAACTCCT 117283
|| | || | | ||| | || || ||| ||| || || ||
Sbjct 212025 CGACAACCTCAGGTGAGGGGCGGTTGTTCAGGTGGGAGAACAGCAGACAAGCGAAGTCGG 212084
Query 117284 GGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGAC 117343
||| ||||||||||| || || || || || || |||||| || || |||||||| |
Sbjct 212085 TGTGCAGACCCTCATCACGAGAGATCAGCTCGTTAGAGAAGGTCAGACCAGGCATGAGGC 212144
Query 117344 CCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACAC 117403
| |||||||||| ||| | |||| | ||| || || ||||||||||||||||| |||
Sbjct 212145 CACGCTTCTTCAGCCAGAAGATAGAGGCGAAAGAGCCAGAGAAGAAGATACCCTCAACAG 212204
Query 117404 ACGCAAACGCAAAAAGGCGCTCGGCGAA 117431
|| || |||| | ||||| ||||||
Sbjct 212205 CAGCGAAGGCAACCAAGCGCTGGGCGAA 212232
>seq347
Length=15602
Score = 107 bits (118), Expect = 2e-18
Identities = 242/364 (66%), Gaps = 15/364 (4%)
Strand=Plus/Minus
Query 169162 AGTGGATCATATTTAGGATGAGACCCTTGATGTGAGAACCATCATTATCGGCATCTGTCA 169221
||| ||| | || | ||| ||||||||||| || |||||||||| ||| ||||||||
Sbjct 5268 AGTCGATAAAGTTGATGATCAGACCCTTGATATGTGAACCATCATGATCTTGATCTGTCA 5209
Query 169222 TAATCATAAGACGACCATAGCGAAGTTCAGAAACATCTTGGTAGTCTTTTCCTTGTTGAA 169281
| ||||| | ||||||||| || | ||| |||| || || | ||| || || ||||
Sbjct 5208 TGATCATCAAACGACCATATCGTAACTCATCAACACTTTCATACTTTTTACCATGCTGAA 5149
Query 169282 GACCCAAGATCTTCTTGAGATCGTTGAACTCTTGGTTTGATGTGAGCTGTGCCACTGAAG 169341
|||| | || ||||| | |||| |||| || |||| | || |||
Sbjct 5148 GACCAAGAATAGCCTTGATGTTTTTGATTTCTTCATTCTTCATGAGTTCAGCATTAGAAA 5089
Query 169342 CGTCGCGGACATTCTTACACTTCCCACGGAGAGGAAAGACGCCATAGTGATCACGTCCAA 169401
| || || || ||| || ||||| | || || || ||||||| ||||| ||||
Sbjct 5088 CATCACGAACGTTCAATAGTTTACCACGAATGGGGAAAACACCATAGTAGTCACGACCAA 5029
Query 169402 CGACGGAGAGACCCGCGACCGCAAGGGTTTTCGCTGAATCACCCTCCGTGACAATGAGGG 169461
| || || | ||| | |||| | || ||||||||||| || |||| || || |
Sbjct 5028 CTACTGACATACCACTCAAGACAAGCGACTTGGCTGAATCACCTTCTGTGATTATCAGAG 4969
Query 169462 TACA---------CTTTCCAGATTGCGCCGTACCCGCCTTGTTTGCGTCGTCCAACTTGG 169512
|||| |||||||| | | ||| || |||||| || ||||||||||
Sbjct 4968 TACAGCGCTTGTTCTTTCCAG---GAAC---ACCGGCAAAGTTTGCATCTTCCAACTTGG 4915
Query 169513 GAAT 169516
||||
Sbjct 4914 GAAT 4911
>seq268
Length=14648
Score = 107 bits (118), Expect = 2e-18
Identities = 242/364 (66%), Gaps = 15/364 (4%)
Strand=Plus/Minus
Query 169162 AGTGGATCATATTTAGGATGAGACCCTTGATGTGAGAACCATCATTATCGGCATCTGTCA 169221
||| ||| | || | ||| ||||||||||| || |||||||||| ||| ||||||||
Sbjct 5310 AGTCGATAAAGTTGATGATCAGACCCTTGATATGTGAACCATCATGATCTTGATCTGTCA 5251
Query 169222 TAATCATAAGACGACCATAGCGAAGTTCAGAAACATCTTGGTAGTCTTTTCCTTGTTGAA 169281
| ||||| | ||||||||| || | ||| |||| || || | ||| || || ||||
Sbjct 5250 TGATCATCAAACGACCATATCGTAACTCATCAACACTTTCATACTTTTTACCATGCTGAA 5191
Query 169282 GACCCAAGATCTTCTTGAGATCGTTGAACTCTTGGTTTGATGTGAGCTGTGCCACTGAAG 169341
|||| | || ||||| | |||| |||| || |||| | || |||
Sbjct 5190 GACCAAGAATAGCCTTGATGTTTTTGATTTCTTCATTCTTCATGAGTTCAGCATTAGAAA 5131
Query 169342 CGTCGCGGACATTCTTACACTTCCCACGGAGAGGAAAGACGCCATAGTGATCACGTCCAA 169401
| || || || ||| || ||||| | || || || ||||||| ||||| ||||
Sbjct 5130 CATCACGAACGTTCAATAGTTTACCACGAATGGGGAAAACACCATAGTAGTCACGACCAA 5071
Query 169402 CGACGGAGAGACCCGCGACCGCAAGGGTTTTCGCTGAATCACCCTCCGTGACAATGAGGG 169461
| || || | ||| | |||| | || ||||||||||| || |||| || || |
Sbjct 5070 CTACTGACATACCACTCAAGACAAGCGACTTGGCTGAATCACCTTCTGTGATTATCAGAG 5011
Query 169462 TACA---------CTTTCCAGATTGCGCCGTACCCGCCTTGTTTGCGTCGTCCAACTTGG 169512
|||| |||||||| | | ||| || |||||| || ||||||||||
Sbjct 5010 TACAGCGCTTGTTCTTTCCAG---GAAC---ACCGGCAAAGTTTGCATCTTCCAACTTGG 4957
Query 169513 GAAT 169516
||||
Sbjct 4956 GAAT 4953
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589974583077320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |