Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017 -02-15] 843 sequences; 47,573,060 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq578 134 2e-26 seq657 109 6e-19 seq347 107 2e-18 seq268 107 2e-18 >seq578 Length=440600 Score = 134 bits (148), Expect = 2e-26 Identities = 406/619 (66%), Gaps = 16/619 (3%) Strand=Plus/Minus Query 106695 TTGTG-TAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCT 106753 ||||| || || || |||||||| || || | || || ||||| || |||| | | Sbjct 116016 TTGTGGTACAGAGCCTCAAACTCATCGCCATAGACATCAGAAAGACCGGGAGCCTCATTT 115957 Query 106754 GGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATC 106813 || ||||| || | ||| | ||| |||||| ||||||||||| || || ||| || Sbjct 115956 GGGCAGAATAGGGTCCAGTCACCGTTAGACTCAACACGCTTCATGAAGAGATCGGGAGTC 115897 Query 106814 CACAGGGATGAAAAGAGATCTC-TACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAA 106872 || |||| | ||||| || | | | | || ||||||| | ||| ||||| || | Sbjct 115896 CAGAGGGCATAGAAGAGGTCACGTGCTCTGA-CCTCTTCCTTACCGTGGTTCTTGCGAAG 115838 Query 106873 CTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC--- 106929 || | |||||| | ||| || | |||||| ||||| || |||| |||| || || Sbjct 115837 GTCCAAGAACTCAAAGATGTCGGAGTGCCAGGGCTCCAGGTAGATAGCGAAAGCACCAGG 115778 Query 106930 ---CTT-TCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCA 106985 ||| | ||||| || | || || | || ||| ||| || || ||||||| Sbjct 115777 GCGCTTGTTCCCGCCC----TGGTCAACGTATCTTGCAGTGTTGTTGAACACTCGAAGCA 115722 Query 106986 TTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCA 107045 | || | || || | || || || || || | || ||| | || | | Sbjct 115721 TAGGGACAAGCCCGTTGGAAGTTCCGTTAGTACCACCGATGTAAGAACCTGTAGCACGGA 115662 Query 107046 CATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAA 107105 | |||| || | |||||||| || || ||| ||||| ||||| | | | Sbjct 115661 TACGGTGGACGTTGAGACCAATACCACCCGCAGTCTTGGAGATCATGGCACAAGTCTTCA 115602 Query 107106 GAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACA 107165 || |||||||||| | || ||||||||| | ||||||||||||| || || Sbjct 115601 AGGTGTCATAGATACCCTCAATGCTGTCCTCCTTCATATCGATAAGGAAGCAGGAGGCCA 115542 Query 107166 TCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAA-CATACCT 107224 |||||| || ||||| || ||||| || || || | |||||| |||| || | Sbjct 115541 GCTGCGGCTGAGGAGTACCGGCGTTGAACAGAGTCGGCGAGGCGTGAGTGAAGTATTTC- 115483 Query 107225 TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATG 107284 ||||||||| | ||| ||||| | || || | ||| || |||||||| |||| Sbjct 115482 TGGGACATCAGATTGTAGGTCTCGATAACCTTCTCGAGGTCATCACCGTGGATTCCGACC 115423 Query 107285 GCCACACGCATAAACATGT 107303 || |||||||||| ||||| Sbjct 115422 GCAACACGCATAATCATGT 115404 Score = 111 bits (122), Expect = 2e-19 Identities = 130/176 (74%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 106469 GATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACAC 106528 || ||||| |||||||| || |||||| | |||||||| | || || || || Sbjct 116296 GAGGCCAAGTTGCAAACGGCGACCTCATCGGGGGCAGTGTACTCGATGATCTCAGTGCAG 116237 Query 106529 AAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCC 106588 | ||| || || || || |||| ||||| ||||| ||||| ||||||||||||||| Sbjct 116236 AGGTTAGAGCTGCGGATAGTACCCAGGTTCTTCTGGTTGCTCTTCTTGTTGCACGCATCC 116177 Query 106589 TTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCA 106644 ||||| |||||| |||| | || ||||| ||||| | || |||||| || | ||| Sbjct 116176 TTGTACAGCATGAAGGGGTTACCGGTCTCGGTCTGGGCCTCGAGAATGGCATACCA 116121 >seq657 Length=446211 Score = 109 bits (120), Expect = 6e-19 Identities = 294/448 (66%), Gaps = 4/448 (1%) Strand=Plus/Plus Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045 ||||| || || |||||||| |||||||||||||| ||| | || ||||| ||||| Sbjct 211787 TAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCGAGCGAGATGTTGTCCATG 211846 Query 117046 AAGTCAAATGGATTCTTCGCGTTCCA--AATGGGTGGCACCCCAACTTGTTTGAGGAGAC 117103 ||||| || || || | ||||| | | | || || || || || | Sbjct 211847 AAGTCGAAGGGGTTTGTGGCGTTGTAGTACTTCTTGTTGCC--AAGAGAGACCAGCAGGC 211904 Query 117104 GATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGATTAC 117163 | || | || |||| ||||||| | |||| || ||||||||||| | ||| | Sbjct 211905 GGTCGGCAACGAACTCGATGTACTGGCACATGAGCTTGGAGTTCATACCAAGGAGGGCAA 211964 Query 117164 ATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGGCGT 117223 ||||| |||||| | |||| | | |||||| || || || || | ||| | Sbjct 211965 CGGGGAGGGCGTCCGTCAGGAACTCCTGCTCAATGTCGACGGCATCAACGATGATCTTCT 212024 Query 117224 GGATAGTTTCGGTAGTGGGTCTATTACGCAAAGTCTTGAAGAGCTCCACGGCAAACTCCT 117283 || | || | | ||| | || || ||| ||| || || || Sbjct 212025 CGACAACCTCAGGTGAGGGGCGGTTGTTCAGGTGGGAGAACAGCAGACAAGCGAAGTCGG 212084 Query 117284 GGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGAC 117343 ||| ||||||||||| || || || || || || |||||| || || |||||||| | Sbjct 212085 TGTGCAGACCCTCATCACGAGAGATCAGCTCGTTAGAGAAGGTCAGACCAGGCATGAGGC 212144 Query 117344 CCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACAC 117403 | |||||||||| ||| | |||| | ||| || || ||||||||||||||||| ||| Sbjct 212145 CACGCTTCTTCAGCCAGAAGATAGAGGCGAAAGAGCCAGAGAAGAAGATACCCTCAACAG 212204 Query 117404 ACGCAAACGCAAAAAGGCGCTCGGCGAA 117431 || || |||| | ||||| |||||| Sbjct 212205 CAGCGAAGGCAACCAAGCGCTGGGCGAA 212232 >seq347 Length=15602 Score = 107 bits (118), Expect = 2e-18 Identities = 242/364 (66%), Gaps = 15/364 (4%) Strand=Plus/Minus Query 169162 AGTGGATCATATTTAGGATGAGACCCTTGATGTGAGAACCATCATTATCGGCATCTGTCA 169221 ||| ||| | || | ||| ||||||||||| || |||||||||| ||| |||||||| Sbjct 5268 AGTCGATAAAGTTGATGATCAGACCCTTGATATGTGAACCATCATGATCTTGATCTGTCA 5209 Query 169222 TAATCATAAGACGACCATAGCGAAGTTCAGAAACATCTTGGTAGTCTTTTCCTTGTTGAA 169281 | ||||| | ||||||||| || | ||| |||| || || | ||| || || |||| Sbjct 5208 TGATCATCAAACGACCATATCGTAACTCATCAACACTTTCATACTTTTTACCATGCTGAA 5149 Query 169282 GACCCAAGATCTTCTTGAGATCGTTGAACTCTTGGTTTGATGTGAGCTGTGCCACTGAAG 169341 |||| | || ||||| | |||| |||| || |||| | || ||| Sbjct 5148 GACCAAGAATAGCCTTGATGTTTTTGATTTCTTCATTCTTCATGAGTTCAGCATTAGAAA 5089 Query 169342 CGTCGCGGACATTCTTACACTTCCCACGGAGAGGAAAGACGCCATAGTGATCACGTCCAA 169401 | || || || ||| || ||||| | || || || ||||||| ||||| |||| Sbjct 5088 CATCACGAACGTTCAATAGTTTACCACGAATGGGGAAAACACCATAGTAGTCACGACCAA 5029 Query 169402 CGACGGAGAGACCCGCGACCGCAAGGGTTTTCGCTGAATCACCCTCCGTGACAATGAGGG 169461 | || || | ||| | |||| | || ||||||||||| || |||| || || | Sbjct 5028 CTACTGACATACCACTCAAGACAAGCGACTTGGCTGAATCACCTTCTGTGATTATCAGAG 4969 Query 169462 TACA---------CTTTCCAGATTGCGCCGTACCCGCCTTGTTTGCGTCGTCCAACTTGG 169512 |||| |||||||| | | ||| || |||||| || |||||||||| Sbjct 4968 TACAGCGCTTGTTCTTTCCAG---GAAC---ACCGGCAAAGTTTGCATCTTCCAACTTGG 4915 Query 169513 GAAT 169516 |||| Sbjct 4914 GAAT 4911 >seq268 Length=14648 Score = 107 bits (118), Expect = 2e-18 Identities = 242/364 (66%), Gaps = 15/364 (4%) Strand=Plus/Minus Query 169162 AGTGGATCATATTTAGGATGAGACCCTTGATGTGAGAACCATCATTATCGGCATCTGTCA 169221 ||| ||| | || | ||| ||||||||||| || |||||||||| ||| |||||||| Sbjct 5310 AGTCGATAAAGTTGATGATCAGACCCTTGATATGTGAACCATCATGATCTTGATCTGTCA 5251 Query 169222 TAATCATAAGACGACCATAGCGAAGTTCAGAAACATCTTGGTAGTCTTTTCCTTGTTGAA 169281 | ||||| | ||||||||| || | ||| |||| || || | ||| || || |||| Sbjct 5250 TGATCATCAAACGACCATATCGTAACTCATCAACACTTTCATACTTTTTACCATGCTGAA 5191 Query 169282 GACCCAAGATCTTCTTGAGATCGTTGAACTCTTGGTTTGATGTGAGCTGTGCCACTGAAG 169341 |||| | || ||||| | |||| |||| || |||| | || ||| Sbjct 5190 GACCAAGAATAGCCTTGATGTTTTTGATTTCTTCATTCTTCATGAGTTCAGCATTAGAAA 5131 Query 169342 CGTCGCGGACATTCTTACACTTCCCACGGAGAGGAAAGACGCCATAGTGATCACGTCCAA 169401 | || || || ||| || ||||| | || || || ||||||| ||||| |||| Sbjct 5130 CATCACGAACGTTCAATAGTTTACCACGAATGGGGAAAACACCATAGTAGTCACGACCAA 5071 Query 169402 CGACGGAGAGACCCGCGACCGCAAGGGTTTTCGCTGAATCACCCTCCGTGACAATGAGGG 169461 | || || | ||| | |||| | || ||||||||||| || |||| || || | Sbjct 5070 CTACTGACATACCACTCAAGACAAGCGACTTGGCTGAATCACCTTCTGTGATTATCAGAG 5011 Query 169462 TACA---------CTTTCCAGATTGCGCCGTACCCGCCTTGTTTGCGTCGTCCAACTTGG 169512 |||| |||||||| | | ||| || |||||| || |||||||||| Sbjct 5010 TACAGCGCTTGTTCTTTCCAG---GAAC---ACCGGCAAAGTTTGCATCTTCCAACTTGG 4957 Query 169513 GAAT 169516 |||| Sbjct 4956 GAAT 4953 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589974583077320