Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017 -02-15] 843 sequences; 47,573,060 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq680 107 2e-18 >seq680 Length=136445 Score = 107 bits (118), Expect = 2e-18 Identities = 173/246 (70%), Gaps = 2/246 (1%) Strand=Plus/Plus Query 154872 ATTATGATTACATA-CCCATCTACACATGGTGTATTTGAAACTAACATTAGACAGATATG 154930 |||||| | ||||| |||| | || ||||| || || | ||| | | || | || Sbjct 30680 ATTATGGTCACATATCCCAGC-ACTTTCGGTGTCTTCGAGCCCGGCATCAAAGAGGTCTG 30738 Query 154931 TAAGATCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACA 154990 |||||||| || || |||| |||||||| ||| | || || || || | |||||||| Sbjct 30739 CAAGATCGTGCACGAATATGGCGGTCAGGTCTATATGGACGGTGCCAACATGAATGCACA 30798 Query 154991 GGTAGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAA 155050 | | ||||| || | ||| ||| |||||||| || || | ||| |||| || Sbjct 30799 GATTGGACTTTGCTCTCCTGGAGAGATTGGAGCAGATGTCTGCCACTTGAACCTACACAA 30858 Query 155051 AACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGTAGCAAA 155110 || ||||||||||| || || ||||| || |||||||| || || || ||||| || | Sbjct 30859 GACCTTCTGTATTCCTCACGGCGGTGGTGGCCCTGGCGTGGGACCCATTGGTGTTGCTGA 30918 Query 155111 ACATCT 155116 ||||| Sbjct 30919 GCATCT 30924 Score = 98.7 bits (108), Expect = 1e-15 Identities = 165/239 (69%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 153777 GGTATTCCTATGGGATATGGAGGTCCTCATGCTGCATTCTTTGCAACAACAGACAAGTAT 153836 ||| |||| ||||| | ||||| ||||||||||| ||||| | | || ||||| Sbjct 29534 GGTGTTCCCATGGGCTTCGGAGGCCCTCATGCTGCTTTCTTCTCTTGTGCGGATAAGTAC 29593 Query 153837 AAGAGAAAGATACCTGGCAGAATTGTAGGTCAGTCAGTAGATAGTGAAGGTAATAAAGCA 153896 ||| | ||||| ||||| | |||| ||| ||| ||||| || || || Sbjct 29594 AAGCGTAAGATCCCTGGACGCCTTGTTGGTGTCTCAAAGGATAGACTGGGAAACCGTGCT 29653 Query 153897 TACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGGAGAGACAAAGCAACCAGTAAC 153956 ||| | || || ||||||||||||||||| || | | || || |||||||| ||| Sbjct 29654 CTTAGACTGGCGCTCCAGACTAGAGAGCAGCACATTCGTCGTGAAAAGGCAACCAGCAAC 29713 Query 153957 ATCTGCACAGCTCAGGCACTGCTGGCTAATATGTCTGGATTCTATGCAGCATATCATGG 154015 || |||||||| || || |||| || || ||| || | ||||||| || ||||| Sbjct 29714 ATTTGCACAGCGCAAGCCTTGCTCGCCAACATGAGTGCCATGTATGCAGTCTACCATGG 29772 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579206696545120